| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mopA [H]
Identifier: 158313276
GI number: 158313276
Start: 1731818
End: 1732240
Strand: Direct
Name: mopA [H]
Synonym: Franean1_1436
Alternate gene names: 158313276
Gene position: 1731818-1732240 (Clockwise)
Preceding gene: 158313275
Following gene: 158313281
Centisome position: 19.28
GC content: 66.67
Gene sequence:
>423_bases ATGACCTTGAGCATCCGTAATCGGCTGGCTGGCACCGTCGCTGATATCACGAGTGGTGCTGTCATGGGCACTGTCCGCAT CGCCCTCGCGAACGGCGACACCCTGACATCGGCCGTCACCATGGACGCCATCAAGGACGTCGGCATCGGCATCGGCTCGG CGGTCGAGGTGCTGGTCAAGTCGACGGACGTCTCGCTCGCCACGGGAGAGACGTCGGGCCTGACCATCCGGAACCGACTG GGCGGGACACTGGTCGGCATCGACACAGGCGGCGCGATGGCGCTCGTCCGCATCGACCTCGGCACGGACATCGAGCTGAC CGCGGCGATCACCCGCGCCTCCGCCGACGAGCTCAAGCTTGCCCCGGGCCTGCCCGTGACCGCACTGATCAAGTCAACCG AGGTGGCCTTCTCCGCACTCTGA
Upstream 100 bases:
>100_bases AACCATGACCCACCCTCCCGACGGCCCGAACGGGCGGGTGAGGAGGGTGCGCATGGCCTGGCGCAACCAGCCCGCAACAG GACGCCGTTAATGTCCAGCC
Downstream 100 bases:
>100_bases CGCCCGCGCCGCGACAACCATGCGCCGACGCCGACGCCGACGTCCAGCCGCCGGTCACATCTTCCGGAAGTCCCAGCTTG TGATCTTCTCCGGGGTCACC
Product: TOBE domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTLSIRNRLAGTVADITSGAVMGTVRIALANGDTLTSAVTMDAIKDVGIGIGSAVEVLVKSTDVSLATGETSGLTIRNRL GGTLVGIDTGGAMALVRIDLGTDIELTAAITRASADELKLAPGLPVTALIKSTEVAFSAL
Sequences:
>Translated_140_residues MTLSIRNRLAGTVADITSGAVMGTVRIALANGDTLTSAVTMDAIKDVGIGIGSAVEVLVKSTDVSLATGETSGLTIRNRL GGTLVGIDTGGAMALVRIDLGTDIELTAAITRASADELKLAPGLPVTALIKSTEVAFSAL >Mature_139_residues TLSIRNRLAGTVADITSGAVMGTVRIALANGDTLTSAVTMDAIKDVGIGIGSAVEVLVKSTDVSLATGETSGLTIRNRLG GTLVGIDTGGAMALVRIDLGTDIELTAAITRASADELKLAPGLPVTALIKSTEVAFSAL
Specific function: Unknown
COG id: COG4148
COG function: function code P; ABC-type molybdate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the modE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR004606 - InterPro: IPR008995 - InterPro: IPR003725 - InterPro: IPR016462 - InterPro: IPR005116 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03459 TOBE [H]
EC number: NA
Molecular weight: Translated: 14038; Mature: 13907
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSIRNRLAGTVADITSGAVMGTVRIALANGDTLTSAVTMDAIKDVGIGIGSAVEVLVK CEEECCHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHEEEEE STDVSLATGETSGLTIRNRLGGTLVGIDTGGAMALVRIDLGTDIELTAAITRASADELKL CCCCEEEECCCCCEEEECCCCCEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCCCEEE APGLPVTALIKSTEVAFSAL CCCCCHHHEEECCCEEEECC >Mature Secondary Structure TLSIRNRLAGTVADITSGAVMGTVRIALANGDTLTSAVTMDAIKDVGIGIGSAVEVLVK EEECCHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHEEEEE STDVSLATGETSGLTIRNRLGGTLVGIDTGGAMALVRIDLGTDIELTAAITRASADELKL CCCCEEEECCCCCEEEECCCCCEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCCCEEE APGLPVTALIKSTEVAFSAL CCCCCHHHEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8491722 [H]