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The map label for this gene is 158313225

Identifier: 158313225

GI number: 158313225

Start: 1670392

End: 1671186

Strand: Direct

Name: 158313225

Synonym: Franean1_1380

Alternate gene names: NA

Gene position: 1670392-1671186 (Clockwise)

Preceding gene: 158313216

Following gene: 158313226

Centisome position: 18.6

GC content: 76.23

Gene sequence:

>795_bases
GTGAGCCGGTGGCAGGAGGCCTCGCCGCTGATGGCGGGTCTGGCCGGGGCCGAGGAGGTCGTCGACGGCTGTGGTCGGGA
CCGGACGGTCCCGGACGCGGTGGCGAACGGCCGGCTGCTGTTCCTGCTGTGCCGCGCCTGCGAGGGCGACCAGGCCGCCA
CGCGAGTCGCGGTCGCCCGGGTGGTCCCGGCGCTGGTCACCAAAGCGGCGGCGCACTGCCGGACCGCCGGACGCGGCTTC
GACGCGGTCTTCGACGACCTGCTGGCGGCGGCGTGGATCGTGGTCGCGACCTACCCGGTGGCCCGCCGGCCCGAGAAGAC
GTGGATCAACATCGTCCTCGACACCGAACGGGCGGTGTTCGGCCGGTCCCGGCTGGTCGACCGGCTGACGGTGCTCCTCC
CGCCGCCGATCCTCGCCGAGCATCTGACGGCCCGCACGTCCGCCGGCACCGGTCGCGGCAACACCGGCACCGGTCGCGCC
CGGGACCCGTTGCTGGAGCTGGTCGAGTTGCTGGCCGAAGGCCGTCGCCTGGGGCTGTCGGATGCTGCCCTGCGCATCCT
GGTCGAGTTCGGTGTCGACGGCCTGAGCTCCCAGCAGGTGGCGGCCCGAGACGGCGTGACCGACCGGGCGGTGCGCCTGC
GCCGCCAGCGGGCCGCCGCGGAACTGGCCACCCTGCTCGGCCTCCGCGACGGCGGCGGCCAGCACCAGCCGGCGCGCACC
CGCGACACCGACGGAAGCGGCGTCCAGCGGCGGACGCCCGCCAGGCGGCCCCGGCCGGATGGGCGGGCGGCATGA

Upstream 100 bases:

>100_bases
TCCCGCACGCAGCATCCATCCCCGGTCTGTTTCGCCCTGCCTGGTGCGGTGGTGGCGTGACTGGGCCGCATGGACGGACA
GTTCGGCCTCGACGACTGCG

Downstream 100 bases:

>100_bases
GCGTGGAACGCGGCCGATTCGGTGATGCCGGCTTGGACGCGGAGATCGCAGTGGTCGCCGTGGCGCTCCTCGTCGCGTCG
TCGGCGGCGGCAGTCTGGGC

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSRWQEASPLMAGLAGAEEVVDGCGRDRTVPDAVANGRLLFLLCRACEGDQAATRVAVARVVPALVTKAAAHCRTAGRGF
DAVFDDLLAAAWIVVATYPVARRPEKTWINIVLDTERAVFGRSRLVDRLTVLLPPPILAEHLTARTSAGTGRGNTGTGRA
RDPLLELVELLAEGRRLGLSDAALRILVEFGVDGLSSQQVAARDGVTDRAVRLRRQRAAAELATLLGLRDGGGQHQPART
RDTDGSGVQRRTPARRPRPDGRAA

Sequences:

>Translated_264_residues
MSRWQEASPLMAGLAGAEEVVDGCGRDRTVPDAVANGRLLFLLCRACEGDQAATRVAVARVVPALVTKAAAHCRTAGRGF
DAVFDDLLAAAWIVVATYPVARRPEKTWINIVLDTERAVFGRSRLVDRLTVLLPPPILAEHLTARTSAGTGRGNTGTGRA
RDPLLELVELLAEGRRLGLSDAALRILVEFGVDGLSSQQVAARDGVTDRAVRLRRQRAAAELATLLGLRDGGGQHQPART
RDTDGSGVQRRTPARRPRPDGRAA
>Mature_263_residues
SRWQEASPLMAGLAGAEEVVDGCGRDRTVPDAVANGRLLFLLCRACEGDQAATRVAVARVVPALVTKAAAHCRTAGRGFD
AVFDDLLAAAWIVVATYPVARRPEKTWINIVLDTERAVFGRSRLVDRLTVLLPPPILAEHLTARTSAGTGRGNTGTGRAR
DPLLELVELLAEGRRLGLSDAALRILVEFGVDGLSSQQVAARDGVTDRAVRLRRQRAAAELATLLGLRDGGGQHQPARTR
DTDGSGVQRRTPARRPRPDGRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28216; Mature: 28084

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRWQEASPLMAGLAGAEEVVDGCGRDRTVPDAVANGRLLFLLCRACEGDQAATRVAVAR
CCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
VVPALVTKAAAHCRTAGRGFDAVFDDLLAAAWIVVATYPVARRPEKTWINIVLDTERAVF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHH
GRSRLVDRLTVLLPPPILAEHLTARTSAGTGRGNTGTGRARDPLLELVELLAEGRRLGLS
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
DAALRILVEFGVDGLSSQQVAARDGVTDRAVRLRRQRAAAELATLLGLRDGGGQHQPART
HHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RDTDGSGVQRRTPARRPRPDGRAA
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRWQEASPLMAGLAGAEEVVDGCGRDRTVPDAVANGRLLFLLCRACEGDQAATRVAVAR
CCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
VVPALVTKAAAHCRTAGRGFDAVFDDLLAAAWIVVATYPVARRPEKTWINIVLDTERAVF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHH
GRSRLVDRLTVLLPPPILAEHLTARTSAGTGRGNTGTGRARDPLLELVELLAEGRRLGLS
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
DAALRILVEFGVDGLSSQQVAARDGVTDRAVRLRRQRAAAELATLLGLRDGGGQHQPART
HHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RDTDGSGVQRRTPARRPRPDGRAA
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA