Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313216

Identifier: 158313216

GI number: 158313216

Start: 1654784

End: 1655233

Strand: Direct

Name: 158313216

Synonym: Franean1_1371

Alternate gene names: NA

Gene position: 1654784-1655233 (Clockwise)

Preceding gene: 158313215

Following gene: 158313225

Centisome position: 18.42

GC content: 62.0

Gene sequence:

>450_bases
ATGACACCAAAATCATCGCAGCCGTGGGTCGCCACGCTCGTGAGAACTGTCTTCGACCAGGCCGACGCCAATGAGGTCGG
CGGGCAGTTCGACCGGGTCGTCGAAGCCCTCTCCGAGAAACTCCCGAAGGCCGCCGACCATCTCTCCGGCGCAAAAGCCG
ACCTACTCGCGTTCACGACCTACCCGCGGGAGGTCTGGCGGCAGATCTGGTCGTCGAACCCGCAGGAACGACTGAACAAG
GAAATCCGCCGCCGTACCGACGTCGTCGGTATCTTCCCCGACCGTGACGCCATCATACGTCTCGTCGGCGCGGTCCTCGC
GGAACAACACGACGAGTGGATCGAGACCCACCGCTACTTCGGCCTCGAAATCCTCGCGAAAGTCGACGCCACGAACAAGA
AATCCGACACACCTGAGATCGGCGTGACACCCGAAGCTCTGACCGCATAA

Upstream 100 bases:

>100_bases
AGAACATCCCCCATGATCGCCATAGCACGACATCGAACCAGACAGGTCGAACCACCAGGTTGTTCCTGCACAGGCCCATT
ACCTTCGGGACTTGCTCACG

Downstream 100 bases:

>100_bases
CCTTCAACCAGGATCACGCGGCATCACGCTCCGTACACCACCACCCTGGGCATGACCAAGCGCCGGCTCGGGTGCCTACT
TCACTGACCTTGCCCGGACG

Product: transposase, mutator type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTPKSSQPWVATLVRTVFDQADANEVGGQFDRVVEALSEKLPKAADHLSGAKADLLAFTTYPREVWRQIWSSNPQERLNK
EIRRRTDVVGIFPDRDAIIRLVGAVLAEQHDEWIETHRYFGLEILAKVDATNKKSDTPEIGVTPEALTA

Sequences:

>Translated_149_residues
MTPKSSQPWVATLVRTVFDQADANEVGGQFDRVVEALSEKLPKAADHLSGAKADLLAFTTYPREVWRQIWSSNPQERLNK
EIRRRTDVVGIFPDRDAIIRLVGAVLAEQHDEWIETHRYFGLEILAKVDATNKKSDTPEIGVTPEALTA
>Mature_148_residues
TPKSSQPWVATLVRTVFDQADANEVGGQFDRVVEALSEKLPKAADHLSGAKADLLAFTTYPREVWRQIWSSNPQERLNKE
IRRRTDVVGIFPDRDAIIRLVGAVLAEQHDEWIETHRYFGLEILAKVDATNKKSDTPEIGVTPEALTA

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 16739; Mature: 16608

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKSSQPWVATLVRTVFDQADANEVGGQFDRVVEALSEKLPKAADHLSGAKADLLAFTT
CCCCCCCCHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH
YPREVWRQIWSSNPQERLNKEIRRRTDVVGIFPDRDAIIRLVGAVLAEQHDEWIETHRYF
CHHHHHHHHHCCCHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLEILAKVDATNKKSDTPEIGVTPEALTA
HHHHHHHHCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure 
TPKSSQPWVATLVRTVFDQADANEVGGQFDRVVEALSEKLPKAADHLSGAKADLLAFTT
CCCCCCCHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH
YPREVWRQIWSSNPQERLNKEIRRRTDVVGIFPDRDAIIRLVGAVLAEQHDEWIETHRYF
CHHHHHHHHHCCCHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLEILAKVDATNKKSDTPEIGVTPEALTA
HHHHHHHHCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663885; 12788972 [H]