| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313207
Identifier: 158313207
GI number: 158313207
Start: 1643249
End: 1644112
Strand: Direct
Name: 158313207
Synonym: Franean1_1361
Alternate gene names: NA
Gene position: 1643249-1644112 (Clockwise)
Preceding gene: 158313206
Following gene: 158313208
Centisome position: 18.29
GC content: 73.84
Gene sequence:
>864_bases ATGATGGCGCTGATCGGTGCGTTCGGCGGCGCGGCGGCCGGGCTGGGCGTCTGGCTGTTCGCAGCTGCGGCCCGCGGCTC GGTCCACCTGGTGCCAAGCCGGCTCGCGGCCTTGCCCGGCCAGTTACGGCGACCGGCCGGCCATTGGCTGTGGGCGGTCG GCGGCGGCGCGGTGCTCGTGGCCGCGGTGACGCGGATCCCCGCGCTCGGCCTCGTCGTCGCCGCACTCGGCTACGTGATG CTCGAGAACCGCTCTGGTCCGTCGGTGCCGGAGATCACCAGGCTCGGCGACGCGGTCGGCACCTGGGCCGAACAGGTCCG GGAAGGACTGGACGCCGGGCAGCACCTCCGCGCCGCGATCGTCGCGTCGACGGACCATCCGCCGGCCGAGCTCGCCGGCC CGTTGCGTCGCCTGGTCGCCCGGCTGGATGTCCTGTCGTTGCCGGACGCGCTCTGGGCGATGCGCGCCGAGGTGCCCCAC CCGGCGCTCGGCCCGATGATCGCGGCGCTCGACGTCGCCTACCGCCGGGGTGCCGGGGATCTGCCCAGGCTGATGGCCTC TCAGGTGGAGGCCACCCGTCAGAGCGTCGCGCTGCTACGCGACCAGCACGCCCTGCGTGCCCGGCATCGCCGGGCGATGA CTCTGTTGCTGGTCCTGTTCACCGGATCGACCAGCGTGCTGCTGGTGACCTGGCCGGCCTTCCTCGCGCCCTACCGGACC ATGTCGGGTCAGCTGGTCCTCGCCGTGATCGGCGGCGGGGTGGTCCTCGCCGTCCGCGCCCTGGCCGCGATGTCCCGGCC GCCACTCACACCGGACTTCTTCCCCGCCACCGCACTCGCGTCCGCGGCGGATCGGACATCTTGA
Upstream 100 bases:
>100_bases CGTCGGACCGGCTGACCGCGAAGCTGACCGCCGCCGGACTGGACCCGAACGTCCTCGCCCGCGACCGGGTTCTCTCCACC ACGCCGGGGAGGGGACAGCG
Downstream 100 bases:
>100_bases TGATCCGGATAGCGGTGGCGGCGCTGGGCGGGGCGATGGTCGCCTACGGGTTGGTGACGGCCGGACGGGCGGTGACGGCA CGCCGTCCCGACCTTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MMALIGAFGGAAAGLGVWLFAAAARGSVHLVPSRLAALPGQLRRPAGHWLWAVGGGAVLVAAVTRIPALGLVVAALGYVM LENRSGPSVPEITRLGDAVGTWAEQVREGLDAGQHLRAAIVASTDHPPAELAGPLRRLVARLDVLSLPDALWAMRAEVPH PALGPMIAALDVAYRRGAGDLPRLMASQVEATRQSVALLRDQHALRARHRRAMTLLLVLFTGSTSVLLVTWPAFLAPYRT MSGQLVLAVIGGGVVLAVRALAAMSRPPLTPDFFPATALASAADRTS
Sequences:
>Translated_287_residues MMALIGAFGGAAAGLGVWLFAAAARGSVHLVPSRLAALPGQLRRPAGHWLWAVGGGAVLVAAVTRIPALGLVVAALGYVM LENRSGPSVPEITRLGDAVGTWAEQVREGLDAGQHLRAAIVASTDHPPAELAGPLRRLVARLDVLSLPDALWAMRAEVPH PALGPMIAALDVAYRRGAGDLPRLMASQVEATRQSVALLRDQHALRARHRRAMTLLLVLFTGSTSVLLVTWPAFLAPYRT MSGQLVLAVIGGGVVLAVRALAAMSRPPLTPDFFPATALASAADRTS >Mature_287_residues MMALIGAFGGAAAGLGVWLFAAAARGSVHLVPSRLAALPGQLRRPAGHWLWAVGGGAVLVAAVTRIPALGLVVAALGYVM LENRSGPSVPEITRLGDAVGTWAEQVREGLDAGQHLRAAIVASTDHPPAELAGPLRRLVARLDVLSLPDALWAMRAEVPH PALGPMIAALDVAYRRGAGDLPRLMASQVEATRQSVALLRDQHALRARHRRAMTLLLVLFTGSTSVLLVTWPAFLAPYRT MSGQLVLAVIGGGVVLAVRALAAMSRPPLTPDFFPATALASAADRTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29951; Mature: 29951
Theoretical pI: Translated: 11.88; Mature: 11.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMALIGAFGGAAAGLGVWLFAAAARGSVHLVPSRLAALPGQLRRPAGHWLWAVGGGAVLV CCEEEECCCCHHHHHHHHHHHHHCCCCEEECHHHHHHCCHHHCCCCCCEEEEECCHHHHH AAVTRIPALGLVVAALGYVMLENRSGPSVPEITRLGDAVGTWAEQVREGLDAGQHLRAAI HHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHE VASTDHPPAELAGPLRRLVARLDVLSLPDALWAMRAEVPHPALGPMIAALDVAYRRGAGD EECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC LPRLMASQVEATRQSVALLRDQHALRARHRRAMTLLLVLFTGSTSVLLVTWPAFLAPYRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH MSGQLVLAVIGGGVVLAVRALAAMSRPPLTPDFFPATALASAADRTS CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MMALIGAFGGAAAGLGVWLFAAAARGSVHLVPSRLAALPGQLRRPAGHWLWAVGGGAVLV CCEEEECCCCHHHHHHHHHHHHHCCCCEEECHHHHHHCCHHHCCCCCCEEEEECCHHHHH AAVTRIPALGLVVAALGYVMLENRSGPSVPEITRLGDAVGTWAEQVREGLDAGQHLRAAI HHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHE VASTDHPPAELAGPLRRLVARLDVLSLPDALWAMRAEVPHPALGPMIAALDVAYRRGAGD EECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC LPRLMASQVEATRQSVALLRDQHALRARHRRAMTLLLVLFTGSTSVLLVTWPAFLAPYRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH MSGQLVLAVIGGGVVLAVRALAAMSRPPLTPDFFPATALASAADRTS CCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA