| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313191
Identifier: 158313191
GI number: 158313191
Start: 1614470
End: 1615147
Strand: Direct
Name: 158313191
Synonym: Franean1_1341
Alternate gene names: NA
Gene position: 1614470-1615147 (Clockwise)
Preceding gene: 158313190
Following gene: 158313192
Centisome position: 17.97
GC content: 74.78
Gene sequence:
>678_bases ATGGCGCCCAGCAATCCCGCCGGCACACCGGCGACCACGCCCCGCCCCGGCATCCCGCGCGGACGGCGATGGGCACATCC GATCGCCTCCTGGCGTACCTCCCGCCGCGCGACGATCCTCGCCGAGCACCGCGCGGAGCTGGGACGGGCAGGCCGCCAGG CCCAGGCCGAGCTCGTCCGCGCCGGCTACCATCTCGGCCCGGTCCCATACGGCTACCGTGCGCTGCCCGTCCCGGCCATC GACGAATCCGGACGAGCGCACCTGCGGCGTCGGCTTCACCACGACCCGACCACCGCCCCCACCGTCCGGCTGATCTTTCA CCTGCGCGCGCGCCAGCATCGCAGCTACGCGGCCATCACCCACCAGCTCATCACCGTGGCCCTGCCGCCGCCGGGGCAGG GCGCCGACGGGCCGCGGCTGTGGACCGCCGACGCCGTGCGCCGGATCGTCACCAACCCCGTCTACATGGGATGGCAGGTC TGGGGTCGCACGCGCCGGGGCCGCAGAACCGACCCGGCGCAGTGGGTGGTGTGCACCGACGCGCACGAACCGATCGTGAC CGAGCTGCTGTTCACCCACGCCCAGCACCTCCCCGGAACCCGCCCGGCCGCCCTGCCGCCTATAGCCGGCCACCGGGACC CCGGCACACCTCCACCGCCCCTCGCGGAGTTGCCGTGA
Upstream 100 bases:
>100_bases CGGTGGATCCCCATGACGCAGAGCCCATCCGGGATCCCCTCGACGGCGTCCGCGTGCCAAGACAGCCCCGTACCCCCCGG CAGACAGGAGATGACACCGA
Downstream 100 bases:
>100_bases TCCGAGGCGCCCGTCCTCGCCACGGCCGAGACTCAGGGCGGGCGCCGGTGCCCGCCGGCGGCCCGTTGTTGCCCCCGCAG TTGCGGGACCGTCGACTCGC
Product: recombinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MAPSNPAGTPATTPRPGIPRGRRWAHPIASWRTSRRATILAEHRAELGRAGRQAQAELVRAGYHLGPVPYGYRALPVPAI DESGRAHLRRRLHHDPTTAPTVRLIFHLRARQHRSYAAITHQLITVALPPPGQGADGPRLWTADAVRRIVTNPVYMGWQV WGRTRRGRRTDPAQWVVCTDAHEPIVTELLFTHAQHLPGTRPAALPPIAGHRDPGTPPPPLAELP
Sequences:
>Translated_225_residues MAPSNPAGTPATTPRPGIPRGRRWAHPIASWRTSRRATILAEHRAELGRAGRQAQAELVRAGYHLGPVPYGYRALPVPAI DESGRAHLRRRLHHDPTTAPTVRLIFHLRARQHRSYAAITHQLITVALPPPGQGADGPRLWTADAVRRIVTNPVYMGWQV WGRTRRGRRTDPAQWVVCTDAHEPIVTELLFTHAQHLPGTRPAALPPIAGHRDPGTPPPPLAELP >Mature_224_residues APSNPAGTPATTPRPGIPRGRRWAHPIASWRTSRRATILAEHRAELGRAGRQAQAELVRAGYHLGPVPYGYRALPVPAID ESGRAHLRRRLHHDPTTAPTVRLIFHLRARQHRSYAAITHQLITVALPPPGQGADGPRLWTADAVRRIVTNPVYMGWQVW GRTRRGRRTDPAQWVVCTDAHEPIVTELLFTHAQHLPGTRPAALPPIAGHRDPGTPPPPLAELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24830; Mature: 24699
Theoretical pI: Translated: 12.14; Mature: 12.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSNPAGTPATTPRPGIPRGRRWAHPIASWRTSRRATILAEHRAELGRAGRQAQAELVR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH AGYHLGPVPYGYRALPVPAIDESGRAHLRRRLHHDPTTAPTVRLIFHLRARQHRSYAAIT HCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH HQLITVALPPPGQGADGPRLWTADAVRRIVTNPVYMGWQVWGRTRRGRRTDPAQWVVCTD HHEEEEEECCCCCCCCCCEEEHHHHHHHHHCCCHHCCHHHHCCCCCCCCCCCCCEEEECC AHEPIVTELLFTHAQHLPGTRPAALPPIAGHRDPGTPPPPLAELP CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure APSNPAGTPATTPRPGIPRGRRWAHPIASWRTSRRATILAEHRAELGRAGRQAQAELVR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH AGYHLGPVPYGYRALPVPAIDESGRAHLRRRLHHDPTTAPTVRLIFHLRARQHRSYAAIT HCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH HQLITVALPPPGQGADGPRLWTADAVRRIVTNPVYMGWQVWGRTRRGRRTDPAQWVVCTD HHEEEEEECCCCCCCCCCEEEHHHHHHHHHCCCHHCCHHHHCCCCCCCCCCCCCEEEECC AHEPIVTELLFTHAQHLPGTRPAALPPIAGHRDPGTPPPPLAELP CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA