Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313192

Identifier: 158313192

GI number: 158313192

Start: 1615144

End: 1616529

Strand: Direct

Name: 158313192

Synonym: Franean1_1342

Alternate gene names: NA

Gene position: 1615144-1616529 (Clockwise)

Preceding gene: 158313191

Following gene: 158313197

Centisome position: 17.98

GC content: 71.36

Gene sequence:

>1386_bases
GTGATCCGAGGCGCCCGTCCTCGCCACGGCCGAGACTCAGGGCGGGCGCCGGTGCCCGCCGGCGGCCCGTTGTTGCCCCC
GCAGTTGCGGGACCGTCGACTCGCACTGTCCCGCGACCTGGCCACCACCGCCCATCTCTGCTCGGCCTATCCGTTCACCG
TCGAAGCTGGCACCGGCGTCGCCGGCGCCTTCCTGGGCGCCAACCGCCTCGCCGGCGGCGGGTTCTTCTTCGACCTGCAC
GACGCCTACGCCGACGGCCTGCTCCAAGGCCCCAACATGGTCATCTGCGGCGCTGGCGCCTACGGCAAGTCCGCCATCGC
CAAGACGTACGTCTACCGGTCCACCGCCCTCGCCCCGACCCGCTTCGTCGCCGTCATCGACCCGAAAGGGGAGTGGACGG
CCCTGGCCCGCGCGCTCGGCTGGTCCGCGTTGAGGCTGCGACCCGGCGGGTCACTGATCGTCAACCCGTTCGACCGCGGG
CCCGCCCAGCACACGCTCGCTGACACCGACCTGCTCGCGCAGCGGGTGACGGTCGCGACCACCCTGTTCGCGATCGCGCT
CACCAAGGCCGAGCTCGCCGCCGGCGAGCAGCGTCTCCTCCACGAAGCCCTGCGCCATCTCACCGCCGCCACCGCTCCGG
CCGTGAGCCCGACCCTCACCGACCTTCAGCGCCTGCTGGCCGACCCGCCCGCCGCCCTGGCGACCGCGCTGGACACCACC
CCCGCCGATCTCGCGGAACGCCGCCGCCCACTGCTCGACGCCTGCGCGATGCTCGTCGAGCACGACCTGCGCGGCATCTG
TGACACCGCCACCAGCGTCGACCTCTCCTGGACCGACGCCCCCGGTCTCGTGCTCGACCTGTCAGCCCTGCTCACCCGCC
GGCGCACCCTCAAACTCGTCCTCGCCGCGGCAGCCGGCTGGCTGCAGGGCGTCATGTACCAGCAGACCGACCGCCGCAAG
CTCGTCATCCTCGACGAAGGCTGGATTGCCCTCGAGGACCTTGCCATCACCCGCTTCCTGCAGGACCAGTGGCGTCTCGG
CCGGCAGTGGGGAACCGCGAACATCCTCATCACCCATGCCCTGGCCGACCTGCGTTCCCAGGTCGACGACGGCGCCGCCG
CAGGCAAGATCGCCGAAGGGCTGCTCACCACCACCTCGGCCCGAGTTTTCCTGCACCAGAACCCCGAGCAGACCCGCAGG
CTCCTGGCCGACCTCGGACTCACCAGCACCGAGACCAACCTGCTCCGGCTCCTCGACCCGCTCCAGGCACTGTGGAAGAT
CGGAAGCCGAGCAGCTGTCGTCGACCACGTCGTCGCCCCCTGGGAATGGGCTGGGTTCGCTGGCACCGACGACGCGATGA
CCGCCGTCGCACCAACGGCGTACTGA

Upstream 100 bases:

>100_bases
CCCACGCCCAGCACCTCCCCGGAACCCGCCCGGCCGCCCTGCCGCCTATAGCCGGCCACCGGGACCCCGGCACACCTCCA
CCGCCCCTCGCGGAGTTGCC

Downstream 100 bases:

>100_bases
CTCCATCGCGAAGCTTCTGGGTGTCAGCCTGCCGACGTCGTCCACCCACATCTCCGAACTCGGCGGCCGGACTGCGTCTG
CGGCCTCCGGCCGCGGAGCC

Product: ATP-binding protein

Products: NA

Alternate protein names: Type IV Secretory Pathway VirB4 Components-Like Protein; Type IV Secretory Pathway VirB4 Component-Like Protein

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGVAGAFLGANRLAGGGFFFDLH
DAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPTRFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRG
PAQHTLADTDLLAQRVTVATTLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT
PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLVLAAAAGWLQGVMYQQTDRRK
LVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHALADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRR
LLADLGLTSTETNLLRLLDPLQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY

Sequences:

>Translated_461_residues
MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGVAGAFLGANRLAGGGFFFDLH
DAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPTRFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRG
PAQHTLADTDLLAQRVTVATTLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT
PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLVLAAAAGWLQGVMYQQTDRRK
LVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHALADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRR
LLADLGLTSTETNLLRLLDPLQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY
>Mature_461_residues
MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGVAGAFLGANRLAGGGFFFDLH
DAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPTRFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRG
PAQHTLADTDLLAQRVTVATTLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT
PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLVLAAAAGWLQGVMYQQTDRRK
LVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHALADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRR
LLADLGLTSTETNLLRLLDPLQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49330; Mature: 49330

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
AGAFLGANRLAGGGFFFDLHDAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPT
HHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE
RFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRGPAQHTLADTDLLAQRVTVAT
EEEEEECCCCHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
TLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC
PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLV
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
LAAAAGWLQGVMYQQTDRRKLVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHA
HHHHHHHHHHHHHCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRRLLADLGLTSTETNLLRLLDP
HHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHH
LQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY
HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MIRGARPRHGRDSGRAPVPAGGPLLPPQLRDRRLALSRDLATTAHLCSAYPFTVEAGTGV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
AGAFLGANRLAGGGFFFDLHDAYADGLLQGPNMVICGAGAYGKSAIAKTYVYRSTALAPT
HHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE
RFVAVIDPKGEWTALARALGWSALRLRPGGSLIVNPFDRGPAQHTLADTDLLAQRVTVAT
EEEEEECCCCHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
TLFAIALTKAELAAGEQRLLHEALRHLTAATAPAVSPTLTDLQRLLADPPAALATALDTT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC
PADLAERRRPLLDACAMLVEHDLRGICDTATSVDLSWTDAPGLVLDLSALLTRRRTLKLV
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
LAAAAGWLQGVMYQQTDRRKLVILDEGWIALEDLAITRFLQDQWRLGRQWGTANILITHA
HHHHHHHHHHHHHCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LADLRSQVDDGAAAGKIAEGLLTTTSARVFLHQNPEQTRRLLADLGLTSTETNLLRLLDP
HHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHH
LQALWKIGSRAAVVDHVVAPWEWAGFAGTDDAMTAVAPTAY
HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA