| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313190
Identifier: 158313190
GI number: 158313190
Start: 1612841
End: 1614385
Strand: Direct
Name: 158313190
Synonym: Franean1_1340
Alternate gene names: NA
Gene position: 1612841-1614385 (Clockwise)
Preceding gene: 158313189
Following gene: 158313191
Centisome position: 17.96
GC content: 72.69
Gene sequence:
>1545_bases ATGATCCGCCCGCCGGTGTACCGGCTTACCCGCCGCCGGTCCGGCGCGACCCACTTCGGTCTCGCCGGGGCACCGCTGGT GCTGGTCGCAGGGGGTTTCGCCGCGCTGGTTCTGCTTCCGCTGCTGACCGACAGCGTAGCGATCGGAGTCGTCGTGGCCG CTGCCTGCGGGCTGGCCGCGTTCCTGCCGGTACCGGGCGGAGGGCCCGTCTACCAGGCTGTACCGCTTGCCATGCGGCAT CTGGCCCGTCGGGTCGGAAGGCGGCACCAGTGGACCGCTTCGCTGCCCCTGCTCGCCGGCGCTCCTGCCACGGCGGAGAG CACGAGGGGCGAGGCCCGACGGCTCCTACCGCCGCCGCTACGAGGTCTGGAGATCCTCACCGTCCCCCGTGCTTCCGCGA CGGGCGCGACGCGCAGCCTCGCTCCCATCGCCCTGATCCATGACCGGCGCGCCGGCACGCTCACCGCGGTGCTGTCCGCA CGCGGCAGTGAGTTCGGGCTGCTCGAGCCTGCTGACCAGCATCACCGGCTGTCCGCCTGGGCGCAGGTCCTCTCCAACAC TGCCCGCGACAGCGGCGTGGTGCGGCTGGGCTGGTCGCTGTGGTCCGCTCCTGTCTCGCCGGCCGACCATGTGCACTGGC TGAAGGACCGCCACCCTGACACGGCCACGGCGGGCGTCGGGCACACCCGGGCGGCTGAGGACTACCAGACGCTGCTCGAG AACGCCGCGGCGACGCTGACCCGCCATGACTTACGGCTGTGGCTGTCACTCGACACAGGCCGGCTGCCCCGCCGCGCCGA CCCGACTGACGCCGCGGCGCAGGCCGCGCTCACCCTGGCCGAACGGTGCCGCGCCGCCGGCCTGGTCGTGGATGATCCCG ATTCGCCGGTGGGCGTCGCCGAGGCGCTGCGTCTGCGCGCCGACCCGTCCGTGGCCGCCACCCTCTCCAGAGTGCAGCGC ACGCTCGCACAGCAGATGGGCACCGCCAGCGTTATAGACGGCGTGCACGCCGGGCCGTTGTCGATGCACGCGCAATGGGA CGCCGTGCGCATCGACGACGTATGGCACCGGGTCTTCTGGGTGTCACAGTGGCCGACGGCCGCCCTGCACCCGGGCTGGC TCGACCCCCTGCTGTTCGACGTCTCCTGCGTCCGCACGGTGGCGCTCCTGCTGGAGCCGGTGTCCGCACGTGCCTCCCGC CGGCGGATCAACTCCGACGCCGTCGAGGTGGAGAGCCGGATGGCGGTGCGGGAACGGCACGGTTTTCGGGTTCCGACCCA CCTGGCAGGGGCGCAGCAGCAGGTCGACGAACGGGAAGCCGAACTGCACGCCGGCCACGCCGAATACGGCTACCTCGCAC TCGTCGACATCGCCGCGCCGACCCGCGGCGACCTCGACGACGCCAGCCGCCAGCTCGTCGACGTGGCCGCGTTCGCCGGC ATCAACGAAATCCGCCCGCTACACGGCCGCCACGACCTGGCCTGGGCCGCGACCCTACCCACCGGCAGAGCACCCGGCCG CGGGCTTCTCGGTGGATCCCCATGA
Upstream 100 bases:
>100_bases CGCTGGGTGATCCGCGGTCTGGCGGGCGCGTTCGGCGGGGCGAGCCTCCGCCTGCTCCGCCCGGTGACCGGCGAGGACCC GAAAGTCCGCGGGGCCGGTC
Downstream 100 bases:
>100_bases CGCAGAGCCCATCCGGGATCCCCTCGACGGCGTCCGCGTGCCAAGACAGCCCCGTACCCCCCGGCAGACAGGAGATGACA CCGAATGGCGCCCAGCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MIRPPVYRLTRRRSGATHFGLAGAPLVLVAGGFAALVLLPLLTDSVAIGVVVAAACGLAAFLPVPGGGPVYQAVPLAMRH LARRVGRRHQWTASLPLLAGAPATAESTRGEARRLLPPPLRGLEILTVPRASATGATRSLAPIALIHDRRAGTLTAVLSA RGSEFGLLEPADQHHRLSAWAQVLSNTARDSGVVRLGWSLWSAPVSPADHVHWLKDRHPDTATAGVGHTRAAEDYQTLLE NAAATLTRHDLRLWLSLDTGRLPRRADPTDAAAQAALTLAERCRAAGLVVDDPDSPVGVAEALRLRADPSVAATLSRVQR TLAQQMGTASVIDGVHAGPLSMHAQWDAVRIDDVWHRVFWVSQWPTAALHPGWLDPLLFDVSCVRTVALLLEPVSARASR RRINSDAVEVESRMAVRERHGFRVPTHLAGAQQQVDEREAELHAGHAEYGYLALVDIAAPTRGDLDDASRQLVDVAAFAG INEIRPLHGRHDLAWAATLPTGRAPGRGLLGGSP
Sequences:
>Translated_514_residues MIRPPVYRLTRRRSGATHFGLAGAPLVLVAGGFAALVLLPLLTDSVAIGVVVAAACGLAAFLPVPGGGPVYQAVPLAMRH LARRVGRRHQWTASLPLLAGAPATAESTRGEARRLLPPPLRGLEILTVPRASATGATRSLAPIALIHDRRAGTLTAVLSA RGSEFGLLEPADQHHRLSAWAQVLSNTARDSGVVRLGWSLWSAPVSPADHVHWLKDRHPDTATAGVGHTRAAEDYQTLLE NAAATLTRHDLRLWLSLDTGRLPRRADPTDAAAQAALTLAERCRAAGLVVDDPDSPVGVAEALRLRADPSVAATLSRVQR TLAQQMGTASVIDGVHAGPLSMHAQWDAVRIDDVWHRVFWVSQWPTAALHPGWLDPLLFDVSCVRTVALLLEPVSARASR RRINSDAVEVESRMAVRERHGFRVPTHLAGAQQQVDEREAELHAGHAEYGYLALVDIAAPTRGDLDDASRQLVDVAAFAG INEIRPLHGRHDLAWAATLPTGRAPGRGLLGGSP >Mature_514_residues MIRPPVYRLTRRRSGATHFGLAGAPLVLVAGGFAALVLLPLLTDSVAIGVVVAAACGLAAFLPVPGGGPVYQAVPLAMRH LARRVGRRHQWTASLPLLAGAPATAESTRGEARRLLPPPLRGLEILTVPRASATGATRSLAPIALIHDRRAGTLTAVLSA RGSEFGLLEPADQHHRLSAWAQVLSNTARDSGVVRLGWSLWSAPVSPADHVHWLKDRHPDTATAGVGHTRAAEDYQTLLE NAAATLTRHDLRLWLSLDTGRLPRRADPTDAAAQAALTLAERCRAAGLVVDDPDSPVGVAEALRLRADPSVAATLSRVQR TLAQQMGTASVIDGVHAGPLSMHAQWDAVRIDDVWHRVFWVSQWPTAALHPGWLDPLLFDVSCVRTVALLLEPVSARASR RRINSDAVEVESRMAVRERHGFRVPTHLAGAQQQVDEREAELHAGHAEYGYLALVDIAAPTRGDLDDASRQLVDVAAFAG INEIRPLHGRHDLAWAATLPTGRAPGRGLLGGSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54908; Mature: 54908
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPPVYRLTRRRSGATHFGLAGAPLVLVAGGFAALVLLPLLTDSVAIGVVVAAACGLAA CCCCCHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPVPGGGPVYQAVPLAMRHLARRVGRRHQWTASLPLLAGAPATAESTRGEARRLLPPPL EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHCCCHHHCCCCCCC RGLEILTVPRASATGATRSLAPIALIHDRRAGTLTAVLSARGSEFGLLEPADQHHRLSAW CCCEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHH AQVLSNTARDSGVVRLGWSLWSAPVSPADHVHWLKDRHPDTATAGVGHTRAAEDYQTLLE HHHHHHCCCCCCEEEECHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH NAAATLTRHDLRLWLSLDTGRLPRRADPTDAAAQAALTLAERCRAAGLVVDDPDSPVGVA HHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHH EALRLRADPSVAATLSRVQRTLAQQMGTASVIDGVHAGPLSMHAQWDAVRIDDVWHRVFW HHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHE VSQWPTAALHPGWLDPLLFDVSCVRTVALLLEPVSARASRRRINSDAVEVESRMAVRERH ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GFRVPTHLAGAQQQVDEREAELHAGHAEYGYLALVDIAAPTRGDLDDASRQLVDVAAFAG CCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCC INEIRPLHGRHDLAWAATLPTGRAPGRGLLGGSP HHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MIRPPVYRLTRRRSGATHFGLAGAPLVLVAGGFAALVLLPLLTDSVAIGVVVAAACGLAA CCCCCHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPVPGGGPVYQAVPLAMRHLARRVGRRHQWTASLPLLAGAPATAESTRGEARRLLPPPL EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHCCCHHHCCCCCCC RGLEILTVPRASATGATRSLAPIALIHDRRAGTLTAVLSARGSEFGLLEPADQHHRLSAW CCCEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHH AQVLSNTARDSGVVRLGWSLWSAPVSPADHVHWLKDRHPDTATAGVGHTRAAEDYQTLLE HHHHHHCCCCCCEEEECHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH NAAATLTRHDLRLWLSLDTGRLPRRADPTDAAAQAALTLAERCRAAGLVVDDPDSPVGVA HHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHH EALRLRADPSVAATLSRVQRTLAQQMGTASVIDGVHAGPLSMHAQWDAVRIDDVWHRVFW HHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHE VSQWPTAALHPGWLDPLLFDVSCVRTVALLLEPVSARASRRRINSDAVEVESRMAVRERH ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GFRVPTHLAGAQQQVDEREAELHAGHAEYGYLALVDIAAPTRGDLDDASRQLVDVAAFAG CCCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCC INEIRPLHGRHDLAWAATLPTGRAPGRGLLGGSP HHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA