| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313189
Identifier: 158313189
GI number: 158313189
Start: 1611132
End: 1612844
Strand: Direct
Name: 158313189
Synonym: Franean1_1339
Alternate gene names: NA
Gene position: 1611132-1612844 (Clockwise)
Preceding gene: 158313188
Following gene: 158313190
Centisome position: 17.94
GC content: 65.97
Gene sequence:
>1713_bases ATGACGGGCCCGCGTCGCCAGCGGGCGCACGCCCGCCATCGAGCGGGGCATCGACCCTGGACTTGTCCCGGCCGTCGCCC GGGGTGTCGCGAGCACGGCCGCAGCGGTCCGGCACCAGTTAGCTACCGTGACGCACGCCGCGGTGTACGGCTTACGGTCG GCGTGCTGGCGGTGGTGAGCATTCTCGGATTTGCGGTGTGGACGTTCGTCGACCGTTCGTCTTCGCCGGAGGCCCTTGCT GCTTCGGTTGTCGCCTCTACGGCGGATGATCCGGATTGCCGCACGGCCACCGCGACCTTCACGGACGTTTCGGTGCCCGG GTATGGCGGCCCGGCGCCCGCAGGCTGGCAGCCAGCTCAGCGCTGCCCATCCGATAGTCGGCTGGGGGCGCGATCGCCGG AGAGCGGTTTCGCAGCCCAGCCGGCGCAGATTCCGGGAATCGGCGGGATTGTTGGTGGTCTGGTGGGCGGAGGCATCACG GGGGTTATGGAAACGGCGGTCGAAACCGTAGTGAACCGGGTGTCGCAGAATCTGGTTGACGCGGCCAAAAGTATGATCCT CGAGTTCCTCGGGGCATCGACCCGGCCGCAGGTGACAGCAGAGGAGTTTATCGGCCCTCACGGTGCGTACCACAGCACGG CATCGATGGCCACTCTGCTGCTCGTCGGATGCGTGATGATCGGTGTTGGGCAGGGACTCTGGTCTGGCGAGCCGGTCCAG GCCATGCTGCGACTTCTTGGCGATATACCCGTCGCGGTACTGGCCATACTGGGTTTTCCGTGGGTCGTGGATCAGCTGGT CACGATTTCCGATGTGATGGCCGACTGGGTGCTCGGGAACGACCTTCGTACCAGGAATGAGATCCTCGATCTGGTCGTGC CTTTCTCTGGCGGCCCAGACGGTAACGTCGGGTATCTGATCCCCCGGATCTTCGTGTATCTCGGGGTCGCCTTGATATAC CTGGAACTCGTCGTGCGGAACGGTCTGATCTACATGGTCGTCGCGCTTGCCCCGCTGTCATTCATGGCGATAACGATGTC AGGGGCTAAATTGGCGGCGCGGAAGGCTGTCGAAATGGTTGTCGCCATAATTTTGATCAAGCCGGCGGTATTCGTCGAGC TACGGGTAGGGCTCGACCTCGCTCATCCGGGTCTCGGTAGCCCGGCGGCCGATGGTGATGCGTGGGGAGAAATCTTTGTC GGCATGGCGATCGTGTTTATCGCCGCGTTCATGCCATGGATCATCTGGCGCCTCATGCCCCTGATGGAACATGCGATGGT CGCACAAGGAGTTGCCCGAGCGCCGTTCCGCGCTGGGATGCAGGCCATGCAGATGGTGTACTTCGGGTCCGCGCTGGCCG GGCGCGGCGCCCGCGGTGGAGCAGGCGGTGGACGCGGCAGGGTGTTCGGGCAGCAGCCAGCCGGCGCTGGAGGCGGAGGC GGGTTCGGCCCGCCTCGGAGTCTGACCGGTACGGGTGCCTCCGCGAACGGCCCAACCCGCCCGATGACACGTGACAGCTC TGGCGCGGGCAGTGAACGGCGCGGAACTAGGCGGGCAGAGACACCTTCTTCGTCGAAGCCGCCGTCTGGTCCGGACCTGG GGGAGCGTTCGCTGGGTGATCCGCGGTCTGGCGGGCGCGTTCGGCGGGGCGAGCCTCCGCCTGCTCCGCCCGGTGACCGG CGAGGACCCGAAAGTCCGCGGGGCCGGTCATGA
Upstream 100 bases:
>100_bases CCGCCAAGATGATCTTCGGTGGTGGGGGCGGCGCGTTGATCATTACGCTCAGCGCGAGGATCATTGGTTGGCTGATCAGT GATCCCGCGACGGCGAACGC
Downstream 100 bases:
>100_bases TCCGCCCGCCGGTGTACCGGCTTACCCGCCGCCGGTCCGGCGCGACCCACTTCGGTCTCGCCGGGGCACCGCTGGTGCTG GTCGCAGGGGGTTTCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MTGPRRQRAHARHRAGHRPWTCPGRRPGCREHGRSGPAPVSYRDARRGVRLTVGVLAVVSILGFAVWTFVDRSSSPEALA ASVVASTADDPDCRTATATFTDVSVPGYGGPAPAGWQPAQRCPSDSRLGARSPESGFAAQPAQIPGIGGIVGGLVGGGIT GVMETAVETVVNRVSQNLVDAAKSMILEFLGASTRPQVTAEEFIGPHGAYHSTASMATLLLVGCVMIGVGQGLWSGEPVQ AMLRLLGDIPVAVLAILGFPWVVDQLVTISDVMADWVLGNDLRTRNEILDLVVPFSGGPDGNVGYLIPRIFVYLGVALIY LELVVRNGLIYMVVALAPLSFMAITMSGAKLAARKAVEMVVAIILIKPAVFVELRVGLDLAHPGLGSPAADGDAWGEIFV GMAIVFIAAFMPWIIWRLMPLMEHAMVAQGVARAPFRAGMQAMQMVYFGSALAGRGARGGAGGGRGRVFGQQPAGAGGGG GFGPPRSLTGTGASANGPTRPMTRDSSGAGSERRGTRRAETPSSSKPPSGPDLGERSLGDPRSGGRVRRGEPPPAPPGDR RGPESPRGRS
Sequences:
>Translated_570_residues MTGPRRQRAHARHRAGHRPWTCPGRRPGCREHGRSGPAPVSYRDARRGVRLTVGVLAVVSILGFAVWTFVDRSSSPEALA ASVVASTADDPDCRTATATFTDVSVPGYGGPAPAGWQPAQRCPSDSRLGARSPESGFAAQPAQIPGIGGIVGGLVGGGIT GVMETAVETVVNRVSQNLVDAAKSMILEFLGASTRPQVTAEEFIGPHGAYHSTASMATLLLVGCVMIGVGQGLWSGEPVQ AMLRLLGDIPVAVLAILGFPWVVDQLVTISDVMADWVLGNDLRTRNEILDLVVPFSGGPDGNVGYLIPRIFVYLGVALIY LELVVRNGLIYMVVALAPLSFMAITMSGAKLAARKAVEMVVAIILIKPAVFVELRVGLDLAHPGLGSPAADGDAWGEIFV GMAIVFIAAFMPWIIWRLMPLMEHAMVAQGVARAPFRAGMQAMQMVYFGSALAGRGARGGAGGGRGRVFGQQPAGAGGGG GFGPPRSLTGTGASANGPTRPMTRDSSGAGSERRGTRRAETPSSSKPPSGPDLGERSLGDPRSGGRVRRGEPPPAPPGDR RGPESPRGRS >Mature_569_residues TGPRRQRAHARHRAGHRPWTCPGRRPGCREHGRSGPAPVSYRDARRGVRLTVGVLAVVSILGFAVWTFVDRSSSPEALAA SVVASTADDPDCRTATATFTDVSVPGYGGPAPAGWQPAQRCPSDSRLGARSPESGFAAQPAQIPGIGGIVGGLVGGGITG VMETAVETVVNRVSQNLVDAAKSMILEFLGASTRPQVTAEEFIGPHGAYHSTASMATLLLVGCVMIGVGQGLWSGEPVQA MLRLLGDIPVAVLAILGFPWVVDQLVTISDVMADWVLGNDLRTRNEILDLVVPFSGGPDGNVGYLIPRIFVYLGVALIYL ELVVRNGLIYMVVALAPLSFMAITMSGAKLAARKAVEMVVAIILIKPAVFVELRVGLDLAHPGLGSPAADGDAWGEIFVG MAIVFIAAFMPWIIWRLMPLMEHAMVAQGVARAPFRAGMQAMQMVYFGSALAGRGARGGAGGGRGRVFGQQPAGAGGGGG FGPPRSLTGTGASANGPTRPMTRDSSGAGSERRGTRRAETPSSSKPPSGPDLGERSLGDPRSGGRVRRGEPPPAPPGDRR GPESPRGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59314; Mature: 59183
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPRRQRAHARHRAGHRPWTCPGRRPGCREHGRSGPAPVSYRDARRGVRLTVGVLAVVS CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHH ILGFAVWTFVDRSSSPEALAASVVASTADDPDCRTATATFTDVSVPGYGGPAPAGWQPAQ HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHH RCPSDSRLGARSPESGFAAQPAQIPGIGGIVGGLVGGGITGVMETAVETVVNRVSQNLVD HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH AAKSMILEFLGASTRPQVTAEEFIGPHGAYHSTASMATLLLVGCVMIGVGQGLWSGEPVQ HHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH AMLRLLGDIPVAVLAILGFPWVVDQLVTISDVMADWVLGNDLRTRNEILDLVVPFSGGPD HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCC GNVGYLIPRIFVYLGVALIYLELVVRNGLIYMVVALAPLSFMAITMSGAKLAARKAVEMV CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VAIILIKPAVFVELRVGLDLAHPGLGSPAADGDAWGEIFVGMAIVFIAAFMPWIIWRLMP HHHHHHCCHHEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMEHAMVAQGVARAPFRAGMQAMQMVYFGSALAGRGARGGAGGGRGRVFGQQPAGAGGGG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GFGPPRSLTGTGASANGPTRPMTRDSSGAGSERRGTRRAETPSSSKPPSGPDLGERSLGD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PRSGGRVRRGEPPPAPPGDRRGPESPRGRS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGPRRQRAHARHRAGHRPWTCPGRRPGCREHGRSGPAPVSYRDARRGVRLTVGVLAVVS CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHH ILGFAVWTFVDRSSSPEALAASVVASTADDPDCRTATATFTDVSVPGYGGPAPAGWQPAQ HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHH RCPSDSRLGARSPESGFAAQPAQIPGIGGIVGGLVGGGITGVMETAVETVVNRVSQNLVD HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH AAKSMILEFLGASTRPQVTAEEFIGPHGAYHSTASMATLLLVGCVMIGVGQGLWSGEPVQ HHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH AMLRLLGDIPVAVLAILGFPWVVDQLVTISDVMADWVLGNDLRTRNEILDLVVPFSGGPD HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCC GNVGYLIPRIFVYLGVALIYLELVVRNGLIYMVVALAPLSFMAITMSGAKLAARKAVEMV CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VAIILIKPAVFVELRVGLDLAHPGLGSPAADGDAWGEIFVGMAIVFIAAFMPWIIWRLMP HHHHHHCCHHEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMEHAMVAQGVARAPFRAGMQAMQMVYFGSALAGRGARGGAGGGRGRVFGQQPAGAGGGG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GFGPPRSLTGTGASANGPTRPMTRDSSGAGSERRGTRRAETPSSSKPPSGPDLGERSLGD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PRSGGRVRRGEPPPAPPGDRRGPESPRGRS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA