| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313179
Identifier: 158313179
GI number: 158313179
Start: 1598749
End: 1598955
Strand: Direct
Name: 158313179
Synonym: Franean1_1329
Alternate gene names: NA
Gene position: 1598749-1598955 (Clockwise)
Preceding gene: 158313178
Following gene: 158313182
Centisome position: 17.8
GC content: 65.22
Gene sequence:
>207_bases GTGCACCAGGTAGACCTTTCCCGGGCCGTCTGGCGGAAGAGCGCGCTCAGTAGCGGCAACGGCGCCTGCGTCGAGGTGGC GTTCCTCGACACAGCGATCGCGGTGCGTGACTCCAAGGACAAGAGCGGCCCGATGCTGGTTTTCACCCCCGCTGAATGGG ACGCGTTCGTCGGCGGAGTTCTGAACGGCGAGTTCACTCGGCCGTAA
Upstream 100 bases:
>100_bases GCTCTTCGACAACCTGCGCGCGGTCGCCCTCAGCCCCGACGCCTCAACCGCCCTGATCGCCACCCTGATAGCACACGCAC AGTGAGAGGAGGTGTCTACG
Downstream 100 bases:
>100_bases CCAGGAAATCTTGCCTTACCCGCCAATTCGCGGGATCAGGATTCGTGTCCGATCCAGCCTGCCATCTTCGTGAGTTGCGT ATTGCTGCGGTGGTGTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MHQVDLSRAVWRKSALSSGNGACVEVAFLDTAIAVRDSKDKSGPMLVFTPAEWDAFVGGVLNGEFTRP
Sequences:
>Translated_68_residues MHQVDLSRAVWRKSALSSGNGACVEVAFLDTAIAVRDSKDKSGPMLVFTPAEWDAFVGGVLNGEFTRP >Mature_68_residues MHQVDLSRAVWRKSALSSGNGACVEVAFLDTAIAVRDSKDKSGPMLVFTPAEWDAFVGGVLNGEFTRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7310; Mature: 7310
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQVDLSRAVWRKSALSSGNGACVEVAFLDTAIAVRDSKDKSGPMLVFTPAEWDAFVGGV CCCCCCHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCCCHHCCCC LNGEFTRP CCCCCCCC >Mature Secondary Structure MHQVDLSRAVWRKSALSSGNGACVEVAFLDTAIAVRDSKDKSGPMLVFTPAEWDAFVGGV CCCCCCHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEECCCCCHHCCCC LNGEFTRP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA