| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313133
Identifier: 158313133
GI number: 158313133
Start: 1544230
End: 1545324
Strand: Direct
Name: 158313133
Synonym: Franean1_1281
Alternate gene names: NA
Gene position: 1544230-1545324 (Clockwise)
Preceding gene: 158313131
Following gene: 158313134
Centisome position: 17.19
GC content: 75.62
Gene sequence:
>1095_bases GTGACGACCACGCCGACGCTGCGGATCACCGGCCACGTCCTGGTGGGCCCCGACGACGTCCGGGATGAGGCCTGGGTGGT CGACGGGCGGGTGAGCTTCTCCGCCCCGACCGGGGCCGCCGCACGCGACGTGCGCACCGTGTCAGGGTGGGCGATCCCCG GCCTCGTCGACGCGCACTGCCACGTGGGCCTCGTCGCGACCGGGGCCACCGACGCCGCGACCGCCGAAGACCAGATCCGC ACCGACCGGGACACCGGCGCCCTCCTGCTGCGCGACGCGGGATCGCCGTCCGACACCCGCTGGATCGACGACCGCCCGGA CCTGCCGCGACTGATCCGCGCCGGCCGGCACATCGCGCGGCCCAGGCGCTACCTGCGCGGCTACGCGGCCGAAGTGGACC CGGGCGACCTCGTCGCCGAGGTCATCGAGCAGGCCGGCCGCGGCGACGGCTGGGTCAAACTCGTCGGTGACTGGATCGAC CGCTCCGTGGGCGACCTCGCCCCCTGCTGGCCGCCGGACGCGGCCCGCGCCGCGATCGACGCCGCACACGCCCACGGCGC CCGGGTGACGGCACACTGTTTCGCCGAGAACTCCCTCACCGACCTGGCCCGGGCCGGTATCGACTGCGTCGAACACGCCA CCGGGCTCACCGCCGACACCATCACGCTGTTCGCCGAGCGCGGCGTCGCGATCGTCCCGACCCTGGTGAACATCGCGACC TTCGAAGGGATCGCCGCCGGCGCCGAGGCGAGGTTCCCCACCTATGCCCGCCACATGCGCGACCTGCACGCCCGCCGGTA CGACACCGTGGCCGCCGCGCACGAGGCCGGCATTCCGATCTACGTCGGCACGGACGCCGGCGGCTCCCTCCCGCACGGCC TGGTGGCAGACGAGGTGGCCGAGCTCGTCGCCGCCGGGCTCCCGCCGCGGACGGCCCTCGGTGCCGCCTGCTGGGACGCC CGCCGTTGGCTCGGCCGACCCGGCCTGGAGGAGGCCGCGCCCGCCGACCTCGTGGTCTACCCCGAGGACCCGACCGCGGA CGTCCGCGTACTGCGCGCCCCCGACCTCATCGTCCTGCGCGGCCGCGCGATCTAG
Upstream 100 bases:
>100_bases CGGCGATCCGCCTGGCGGCGGATCGCCTGCCCCTGCCCCGCTCCGCGGGAGACCGAATTCCTCCCCGGCCCGAAGGCCGG GGCATCCCCCGGGAGCTCTG
Downstream 100 bases:
>100_bases ACGTCCCTTCGGGCCGTGGGCCCGGCGGAACCTCTCCGCGTGCCGCTCGTTCCACGTGTGGTGGGGCGGCGCCGCACCGA TGCGCGGAGCCCGGTGGCTG
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTTTPTLRITGHVLVGPDDVRDEAWVVDGRVSFSAPTGAAARDVRTVSGWAIPGLVDAHCHVGLVATGATDAATAEDQIR TDRDTGALLLRDAGSPSDTRWIDDRPDLPRLIRAGRHIARPRRYLRGYAAEVDPGDLVAEVIEQAGRGDGWVKLVGDWID RSVGDLAPCWPPDAARAAIDAAHAHGARVTAHCFAENSLTDLARAGIDCVEHATGLTADTITLFAERGVAIVPTLVNIAT FEGIAAGAEARFPTYARHMRDLHARRYDTVAAAHEAGIPIYVGTDAGGSLPHGLVADEVAELVAAGLPPRTALGAACWDA RRWLGRPGLEEAAPADLVVYPEDPTADVRVLRAPDLIVLRGRAI
Sequences:
>Translated_364_residues MTTTPTLRITGHVLVGPDDVRDEAWVVDGRVSFSAPTGAAARDVRTVSGWAIPGLVDAHCHVGLVATGATDAATAEDQIR TDRDTGALLLRDAGSPSDTRWIDDRPDLPRLIRAGRHIARPRRYLRGYAAEVDPGDLVAEVIEQAGRGDGWVKLVGDWID RSVGDLAPCWPPDAARAAIDAAHAHGARVTAHCFAENSLTDLARAGIDCVEHATGLTADTITLFAERGVAIVPTLVNIAT FEGIAAGAEARFPTYARHMRDLHARRYDTVAAAHEAGIPIYVGTDAGGSLPHGLVADEVAELVAAGLPPRTALGAACWDA RRWLGRPGLEEAAPADLVVYPEDPTADVRVLRAPDLIVLRGRAI >Mature_363_residues TTTPTLRITGHVLVGPDDVRDEAWVVDGRVSFSAPTGAAARDVRTVSGWAIPGLVDAHCHVGLVATGATDAATAEDQIRT DRDTGALLLRDAGSPSDTRWIDDRPDLPRLIRAGRHIARPRRYLRGYAAEVDPGDLVAEVIEQAGRGDGWVKLVGDWIDR SVGDLAPCWPPDAARAAIDAAHAHGARVTAHCFAENSLTDLARAGIDCVEHATGLTADTITLFAERGVAIVPTLVNIATF EGIAAGAEARFPTYARHMRDLHARRYDTVAAAHEAGIPIYVGTDAGGSLPHGLVADEVAELVAAGLPPRTALGAACWDAR RWLGRPGLEEAAPADLVVYPEDPTADVRVLRAPDLIVLRGRAI
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 38557; Mature: 38425
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPTLRITGHVLVGPDDVRDEAWVVDGRVSFSAPTGAAARDVRTVSGWAIPGLVDAHC CCCCCEEEEEEEEEECCCCCCCCEEEEECEEEECCCCCCHHHHCEECCCCCCCCEEECCC HVGLVATGATDAATAEDQIRTDRDTGALLLRDAGSPSDTRWIDDRPDLPRLIRAGRHIAR EEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCHHHHH PRRYLRGYAAEVDPGDLVAEVIEQAGRGDGWVKLVGDWIDRSVGDLAPCWPPDAARAAID HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHH AAHAHGARVTAHCFAENSLTDLARAGIDCVEHATGLTADTITLFAERGVAIVPTLVNIAT HHHCCCCEEEEEEECCCCHHHHHHHCHHHHHHHCCCCHHHHHHHHHCCCEEEHHHHHHHH FEGIAAGAEARFPTYARHMRDLHARRYDTVAAAHEAGIPIYVGTDAGGSLPHGLVADEVA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHH ELVAAGLPPRTALGAACWDARRWLGRPGLEEAAPADLVVYPEDPTADVRVLRAPDLIVLR HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEC GRAI CCCC >Mature Secondary Structure TTTPTLRITGHVLVGPDDVRDEAWVVDGRVSFSAPTGAAARDVRTVSGWAIPGLVDAHC CCCCEEEEEEEEEECCCCCCCCEEEEECEEEECCCCCCHHHHCEECCCCCCCCEEECCC HVGLVATGATDAATAEDQIRTDRDTGALLLRDAGSPSDTRWIDDRPDLPRLIRAGRHIAR EEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCHHHHH PRRYLRGYAAEVDPGDLVAEVIEQAGRGDGWVKLVGDWIDRSVGDLAPCWPPDAARAAID HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHH AAHAHGARVTAHCFAENSLTDLARAGIDCVEHATGLTADTITLFAERGVAIVPTLVNIAT HHHCCCCEEEEEEECCCCHHHHHHHCHHHHHHHCCCCHHHHHHHHHCCCEEEHHHHHHHH FEGIAAGAEARFPTYARHMRDLHARRYDTVAAAHEAGIPIYVGTDAGGSLPHGLVADEVA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHH ELVAAGLPPRTALGAACWDARRWLGRPGLEEAAPADLVVYPEDPTADVRVLRAPDLIVLR HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCEEEEC GRAI CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]