| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313056
Identifier: 158313056
GI number: 158313056
Start: 1439371
End: 1440387
Strand: Direct
Name: 158313056
Synonym: Franean1_1204
Alternate gene names: NA
Gene position: 1439371-1440387 (Clockwise)
Preceding gene: 158313055
Following gene: 158313057
Centisome position: 16.02
GC content: 77.19
Gene sequence:
>1017_bases ATGCAGTCAGCGGACGAACCGGCGACCCCCGAGTCGGCGAGTCCCGGGTCGGCGGGCACCGCGCCGGCGAGCCCCGGGCC GGAGGTTCTCGAACCGGTGACCGCGAAGCCGGCGGCCCCGGGCCCCGCGGCCCAGATCCCGGCGCCCCAGCAACCGGTGC CTCCGGACAAGTCGGCTCCGGGCGGGGCGGCTCAGGAGTCCCTGGGCTCGGTCATCGCCGCGGCGCGCCGGGCCGCGGGC CTGACGATCGACGACGTGAGCGACCGGACGAGAATCCGCGCCTCGCTGATCGAGCGGATCGAGCAGGACGACTTCTCCGG CTGCGGCGGCTCCGTCTACGCTCGCGGGCACCTGCGCAGCATCGCGACGACGCTCGGGCTCGAGCCCGGCCCCCTGCTGG CGGTGTACGACGCCGGGCACGAGCACGTGCCGTCCCCGGTCGTGGTCGCCTCGCCGGAGTTCGACCCGCTGCACGGTGGC GCGGGGCGTAACCGCGGCCTTGGCGGCTTCCGCTGGGCACCGGCAATGATCATCTCGCTGGTGGTGGTGTGCGCGCTGGC GCTCGTCGCGCTGCTGCTGCCCTCGGGCGGGGGCGACTCGGACGACTCGGCCACGCCCCGGCCGAGCGCGCCGCCGAGCG CCCCGGCCGCCACGGCACCCCCCGGCCCGGCGCCGGCGCCCACCACCCCGCCGCCCCCCGGGGTGAACGTGCGGGTGGAG GCCCGCGACGCGCAGAGCTGGCTGGAGGTCCGCGACGACAGCGACAAGGTGCTGTTCGCGCAGCTCCTGCAGCGGGGCGA CAGCCGTGAGGTGTCCTCCGAGGGCGCCCTGGAGATCAAGATGGGCAACGCGGGCGCCGTCGACCTCTCCTGCAACGGCA CGAGCCTGGACCGGGCCGGCGGGCCGGGCGAGGTCGTGACGATCCGGCTAGCGCTCGCCGCGACCGGCGGTGGCTGCACG GTCGGCGGGCCGGGCACGGGCGGCCTCGCGGCCGGCGGGCTGGCGGGCTGGCGATGA
Upstream 100 bases:
>100_bases GATAGGTCCGTTGCCAGCTGTCGGAGGTCGGCCGGCGACCGTAATATCGGCTGGCGCACGCCAGCGGCGCCAGTGGCATA ACGGGTGCGGAGGTTCGTTC
Downstream 100 bases:
>100_bases CGGCCCCGCCGACCGGCTGACGTCGGGCTTGGCGGGCTGGCCCTCGGCTCGGGTCGACCACGCCGGGCCGGGGCCGTCGG CGTGTTGTCCGCGGGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MQSADEPATPESASPGSAGTAPASPGPEVLEPVTAKPAAPGPAAQIPAPQQPVPPDKSAPGGAAQESLGSVIAAARRAAG LTIDDVSDRTRIRASLIERIEQDDFSGCGGSVYARGHLRSIATTLGLEPGPLLAVYDAGHEHVPSPVVVASPEFDPLHGG AGRNRGLGGFRWAPAMIISLVVVCALALVALLLPSGGGDSDDSATPRPSAPPSAPAATAPPGPAPAPTTPPPPGVNVRVE ARDAQSWLEVRDDSDKVLFAQLLQRGDSREVSSEGALEIKMGNAGAVDLSCNGTSLDRAGGPGEVVTIRLALAATGGGCT VGGPGTGGLAAGGLAGWR
Sequences:
>Translated_338_residues MQSADEPATPESASPGSAGTAPASPGPEVLEPVTAKPAAPGPAAQIPAPQQPVPPDKSAPGGAAQESLGSVIAAARRAAG LTIDDVSDRTRIRASLIERIEQDDFSGCGGSVYARGHLRSIATTLGLEPGPLLAVYDAGHEHVPSPVVVASPEFDPLHGG AGRNRGLGGFRWAPAMIISLVVVCALALVALLLPSGGGDSDDSATPRPSAPPSAPAATAPPGPAPAPTTPPPPGVNVRVE ARDAQSWLEVRDDSDKVLFAQLLQRGDSREVSSEGALEIKMGNAGAVDLSCNGTSLDRAGGPGEVVTIRLALAATGGGCT VGGPGTGGLAAGGLAGWR >Mature_338_residues MQSADEPATPESASPGSAGTAPASPGPEVLEPVTAKPAAPGPAAQIPAPQQPVPPDKSAPGGAAQESLGSVIAAARRAAG LTIDDVSDRTRIRASLIERIEQDDFSGCGGSVYARGHLRSIATTLGLEPGPLLAVYDAGHEHVPSPVVVASPEFDPLHGG AGRNRGLGGFRWAPAMIISLVVVCALALVALLLPSGGGDSDDSATPRPSAPPSAPAATAPPGPAPAPTTPPPPGVNVRVE ARDAQSWLEVRDDSDKVLFAQLLQRGDSREVSSEGALEIKMGNAGAVDLSCNGTSLDRAGGPGEVVTIRLALAATGGGCT VGGPGTGGLAAGGLAGWR
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33512; Mature: 33512
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSADEPATPESASPGSAGTAPASPGPEVLEPVTAKPAAPGPAAQIPAPQQPVPPDKSAP CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGAAQESLGSVIAAARRAAGLTIDDVSDRTRIRASLIERIEQDDFSGCGGSVYARGHLRS CCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH IATTLGLEPGPLLAVYDAGHEHVPSPVVVASPEFDPLHGGAGRNRGLGGFRWAPAMIISL HHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VVVCALALVALLLPSGGGDSDDSATPRPSAPPSAPAATAPPGPAPAPTTPPPPGVNVRVE HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE ARDAQSWLEVRDDSDKVLFAQLLQRGDSREVSSEGALEIKMGNAGAVDLSCNGTSLDRAG CCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCC GPGEVVTIRLALAATGGGCTVGGPGTGGLAAGGLAGWR CCCCEEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MQSADEPATPESASPGSAGTAPASPGPEVLEPVTAKPAAPGPAAQIPAPQQPVPPDKSAP CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGAAQESLGSVIAAARRAAGLTIDDVSDRTRIRASLIERIEQDDFSGCGGSVYARGHLRS CCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH IATTLGLEPGPLLAVYDAGHEHVPSPVVVASPEFDPLHGGAGRNRGLGGFRWAPAMIISL HHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VVVCALALVALLLPSGGGDSDDSATPRPSAPPSAPAATAPPGPAPAPTTPPPPGVNVRVE HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE ARDAQSWLEVRDDSDKVLFAQLLQRGDSREVSSEGALEIKMGNAGAVDLSCNGTSLDRAG CCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCC GPGEVVTIRLALAATGGGCTVGGPGTGGLAAGGLAGWR CCCCEEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA