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The map label for this gene is 158313052

Identifier: 158313052

GI number: 158313052

Start: 1433222

End: 1434907

Strand: Direct

Name: 158313052

Synonym: Franean1_1200

Alternate gene names: NA

Gene position: 1433222-1434907 (Clockwise)

Preceding gene: 158313051

Following gene: 158313053

Centisome position: 15.96

GC content: 70.88

Gene sequence:

>1686_bases
ATGATGCATCCGCACCCGGAGCTGGGCCCCCCACCGCCGCTGCGTGCCGACGGCCTGAGGATCATCCCGCTCGGCGGCCT
CGGTGAGATCGGTCGCAACATGACCGTGTTCGAGCATGCCGGGCGGCTGCTCATCGTCGACTGCGGGGTGCTCTTCCCCG
AGACCGACCAGCCCGGCGTCGACCTCATCCTGCCGGACTTCACCGCAATCCGGGACCGCCTGCAGGACATCGAGGCGGTC
ATCCTCACACACGCGCACGAGGACCACATCGGCGCCGTCCCGTACCTGCTGCGCGAACGGCGTGACATCCCCCTGGTCGG
CACCCGGCTGACGCTCGCGCTCATGGTGGCCAAGCTCGCCGAACACCGCATCCAGCCGGTGACCCTGCAGATCCGCGAGG
AGGAGAGGCACTCGTTCGGTCCCTTCGACCTCGAGTTCCTCGCCGTCAACCACTCCATCCCAGACGCGGTCGCGGTCGCG
ATCCGCACCGACGCGGGCCTGGTGCTGCACACCGGCGACTTCAAGATGGACCAGCTCCCGCTGGACGGGCGGCTCACCGA
CCTGGGCGGCTTCGCCCGGCTCGGCCGCGAGGGCGTCGACCTGCTGCTCTCGGACTCGACCAACGCCGAGGTCCCCGGCT
TCGTCGCCTCGGAGCGCGCGATCGCCCCCGTGCTCGACAAGGTCTTCCGCGAGGCGGACAGGCGCATCGTCGTCGCGTGT
TTCGCCAGCCACGTCCACCGCGTGCAGCAGGTGCTCGACGCCGCCGAGTCGCACGGCCGGTCGGTCTGCTTCATCGGCCG
GTCGATGGTCCGCAACATGGGTGTCGCCCGCGATCTCGGCCTGCTGCGCGTGCCGCCCGGCCTGGTGATCGACAGCCGGG
ACGTCGACTCGCTTCCCGACCGCAACATCTGCCTGGTATCGACCGGGTCGCAGGGCGAGCCGCTGTCCGCGCTGTCGCGC
ATGGCTAACCGGGACCACGCGATCCGGATCCAGGAGGGCGACACGGTCGTCCTGGCCTCCAGCCTGATCCCGGGCAACGA
GACGGCCGTGTTCCGCGTGATCAACGGTCTGACCAGGTGGGGCGCCCGGGTCGTGCACAAGGGCGTGGCGATGGTCCACA
CCTCCGGGCACGCCCCGGCCGGTGAGCTGCTCTACGTCCTCAACGCGACCAAGCCGTCGAACATGATGCCCGTCCACGGC
GAGTGGCGGCACCTGCGTGCGCACGGCGCGCTCGCGGAGGCCACCGGTGTCCCGCCGGACCGGGTCATCATCGCCGAGGA
CGGCATGGTCGTCGACCTCATCGACGGCCAGGCGGAGATCACCGGAGCGGTGCCCTGCGGGATGGTCTTCGTCGACGGGC
TCGCCGTCGGCGACGTGGGGGAGTCGAGCCTGAAGGACCGGCGGATCCTCGGCGAGGAGGGCTTCATCACGATCACGGTC
GTGGTGGACGCCGCCGCCGGCAAGGTCGTCGTCGGCCCGGATCTCTCCGCCCGCGGGTTCTCCGACTCCCGGGCCGCGTT
CGAGGAGGTCCGCGGCAAGCTCGCGGACGCCCTCGCCGACGCGATGCGCTCCGGCATGACCGACACCAACGCGCTGCAGC
AGCTCGTCCGGCGCACGGTGGGCCGTTGGGTCAACGACCGCTACCGCCGCCGCCCGATGATCCTCCCGGTCGTCCTGGAG
GTCTGA

Upstream 100 bases:

>100_bases
AGCTGCGTGCCGACCTGGCCGCGGCCGTGCTCGATCCCGGGCCCCCGCCCGGGCCCGCGGGGCCGGGCGCCGCCGCGGTC
GTCCCGGGGACGGCGGCCTC

Downstream 100 bases:

>100_bases
GGCGGCCCTCCCGGCCCTGGACCTCACGGTCCAGGGCCGGTTCTCCGCCCTGATGGTCAGTCGGTCGATATATGTCGTGT
GCCGTTATATCGTCCGTGCA

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MMHPHPELGPPPPLRADGLRIIPLGGLGEIGRNMTVFEHAGRLLIVDCGVLFPETDQPGVDLILPDFTAIRDRLQDIEAV
ILTHAHEDHIGAVPYLLRERRDIPLVGTRLTLALMVAKLAEHRIQPVTLQIREEERHSFGPFDLEFLAVNHSIPDAVAVA
IRTDAGLVLHTGDFKMDQLPLDGRLTDLGGFARLGREGVDLLLSDSTNAEVPGFVASERAIAPVLDKVFREADRRIVVAC
FASHVHRVQQVLDAAESHGRSVCFIGRSMVRNMGVARDLGLLRVPPGLVIDSRDVDSLPDRNICLVSTGSQGEPLSALSR
MANRDHAIRIQEGDTVVLASSLIPGNETAVFRVINGLTRWGARVVHKGVAMVHTSGHAPAGELLYVLNATKPSNMMPVHG
EWRHLRAHGALAEATGVPPDRVIIAEDGMVVDLIDGQAEITGAVPCGMVFVDGLAVGDVGESSLKDRRILGEEGFITITV
VVDAAAGKVVVGPDLSARGFSDSRAAFEEVRGKLADALADAMRSGMTDTNALQQLVRRTVGRWVNDRYRRRPMILPVVLE
V

Sequences:

>Translated_561_residues
MMHPHPELGPPPPLRADGLRIIPLGGLGEIGRNMTVFEHAGRLLIVDCGVLFPETDQPGVDLILPDFTAIRDRLQDIEAV
ILTHAHEDHIGAVPYLLRERRDIPLVGTRLTLALMVAKLAEHRIQPVTLQIREEERHSFGPFDLEFLAVNHSIPDAVAVA
IRTDAGLVLHTGDFKMDQLPLDGRLTDLGGFARLGREGVDLLLSDSTNAEVPGFVASERAIAPVLDKVFREADRRIVVAC
FASHVHRVQQVLDAAESHGRSVCFIGRSMVRNMGVARDLGLLRVPPGLVIDSRDVDSLPDRNICLVSTGSQGEPLSALSR
MANRDHAIRIQEGDTVVLASSLIPGNETAVFRVINGLTRWGARVVHKGVAMVHTSGHAPAGELLYVLNATKPSNMMPVHG
EWRHLRAHGALAEATGVPPDRVIIAEDGMVVDLIDGQAEITGAVPCGMVFVDGLAVGDVGESSLKDRRILGEEGFITITV
VVDAAAGKVVVGPDLSARGFSDSRAAFEEVRGKLADALADAMRSGMTDTNALQQLVRRTVGRWVNDRYRRRPMILPVVLE
V
>Mature_561_residues
MMHPHPELGPPPPLRADGLRIIPLGGLGEIGRNMTVFEHAGRLLIVDCGVLFPETDQPGVDLILPDFTAIRDRLQDIEAV
ILTHAHEDHIGAVPYLLRERRDIPLVGTRLTLALMVAKLAEHRIQPVTLQIREEERHSFGPFDLEFLAVNHSIPDAVAVA
IRTDAGLVLHTGDFKMDQLPLDGRLTDLGGFARLGREGVDLLLSDSTNAEVPGFVASERAIAPVLDKVFREADRRIVVAC
FASHVHRVQQVLDAAESHGRSVCFIGRSMVRNMGVARDLGLLRVPPGLVIDSRDVDSLPDRNICLVSTGSQGEPLSALSR
MANRDHAIRIQEGDTVVLASSLIPGNETAVFRVINGLTRWGARVVHKGVAMVHTSGHAPAGELLYVLNATKPSNMMPVHG
EWRHLRAHGALAEATGVPPDRVIIAEDGMVVDLIDGQAEITGAVPCGMVFVDGLAVGDVGESSLKDRRILGEEGFITITV
VVDAAAGKVVVGPDLSARGFSDSRAAFEEVRGKLADALADAMRSGMTDTNALQQLVRRTVGRWVNDRYRRRPMILPVVLE
V

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 60734; Mature: 60734

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHPHPELGPPPPLRADGLRIIPLGGLGEIGRNMTVFEHAGRLLIVDCGVLFPETDQPGV
CCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHCCCEEEEECCEECCCCCCCCC
DLILPDFTAIRDRLQDIEAVILTHAHEDHIGAVPYLLRERRDIPLVGTRLTLALMVAKLA
EEECCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCCEECHHHHHHHHHHHHH
EHRIQPVTLQIREEERHSFGPFDLEFLAVNHSIPDAVAVAIRTDAGLVLHTGDFKMDQLP
HHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCC
LDGRLTDLGGFARLGREGVDLLLSDSTNAEVPGFVASERAIAPVLDKVFREADRRIVVAC
CCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHCCEEEEHH
FASHVHRVQQVLDAAESHGRSVCFIGRSMVRNMGVARDLGLLRVPPGLVIDSRDVDSLPD
HHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCCHHCCCEEECCCCCEECCCCCCCCCC
RNICLVSTGSQGEPLSALSRMANRDHAIRIQEGDTVVLASSLIPGNETAVFRVINGLTRW
CCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHH
GARVVHKGVAMVHTSGHAPAGELLYVLNATKPSNMMPVHGEWRHLRAHGALAEATGVPPD
HHHHHHCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHCCCCCC
RVIIAEDGMVVDLIDGQAEITGAVPCGMVFVDGLAVGDVGESSLKDRRILGEEGFITITV
EEEEECCCEEEEEECCCEEEECCCCCCCCEECCEEECCCCCHHHHHHHCCCCCCCEEEEE
VVDAAAGKVVVGPDLSARGFSDSRAAFEEVRGKLADALADAMRSGMTDTNALQQLVRRTV
EEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GRWVNDRYRRRPMILPVVLEV
HHHHHHHHHCCCEEEEEEEEC
>Mature Secondary Structure
MMHPHPELGPPPPLRADGLRIIPLGGLGEIGRNMTVFEHAGRLLIVDCGVLFPETDQPGV
CCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHCCCEEEEECCEECCCCCCCCC
DLILPDFTAIRDRLQDIEAVILTHAHEDHIGAVPYLLRERRDIPLVGTRLTLALMVAKLA
EEECCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCCEECHHHHHHHHHHHHH
EHRIQPVTLQIREEERHSFGPFDLEFLAVNHSIPDAVAVAIRTDAGLVLHTGDFKMDQLP
HHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCC
LDGRLTDLGGFARLGREGVDLLLSDSTNAEVPGFVASERAIAPVLDKVFREADRRIVVAC
CCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHCCEEEEHH
FASHVHRVQQVLDAAESHGRSVCFIGRSMVRNMGVARDLGLLRVPPGLVIDSRDVDSLPD
HHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCCHHCCCEEECCCCCEECCCCCCCCCC
RNICLVSTGSQGEPLSALSRMANRDHAIRIQEGDTVVLASSLIPGNETAVFRVINGLTRW
CCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHH
GARVVHKGVAMVHTSGHAPAGELLYVLNATKPSNMMPVHGEWRHLRAHGALAEATGVPPD
HHHHHHCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHCCCCCC
RVIIAEDGMVVDLIDGQAEITGAVPCGMVFVDGLAVGDVGESSLKDRRILGEEGFITITV
EEEEECCCEEEEEECCCEEEECCCCCCCCEECCEEECCCCCHHHHHHHCCCCCCCEEEEE
VVDAAAGKVVVGPDLSARGFSDSRAAFEEVRGKLADALADAMRSGMTDTNALQQLVRRTV
EEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GRWVNDRYRRRPMILPVVLEV
HHHHHHHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]