Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yqjI [C]

Identifier: 158313053

GI number: 158313053

Start: 1435007

End: 1435405

Strand: Direct

Name: yqjI [C]

Synonym: Franean1_1201

Alternate gene names: 158313053

Gene position: 1435007-1435405 (Clockwise)

Preceding gene: 158313052

Following gene: 158313054

Centisome position: 15.98

GC content: 74.94

Gene sequence:

>399_bases
ATGGCAATGGAGGACATGCGGGAACCGACGTTCCTGGTGCTCGCCGCGCTGGCTGACGGCCCGCGCCACGGGTACGCGGT
GATCCGCGAGGTCACGGACATCTCCGGCGGTCGGGTGACCATGCGGCCGGGCACGCTCTACGGCGCTCTGGACCGCCTCG
CCGGCGAGGGCCTCGTGCGGGTCGAACGCGAGGAGGTCGTCAACGGGCGGCTGCGGCGGTACTACTCGCTGACCGATGAC
GGGGCGGGCGCGCTCACGGAGCAGACCGAGCGGCTGCGGGCCAACGTCGCCGAGGCTGACCGCAGGCTGCGCCTGCGCGT
CCGGCCCGCCACCGGCCCGGCGACGGCGTTCGCCCGGGTGACCAGGCTGGCGCCCCCGAGCGTGCCGGCGATCGGCTGA

Upstream 100 bases:

>100_bases
AGGCGGCCCTCCCGGCCCTGGACCTCACGGTCCAGGGCCGGTTCTCCGCCCTGATGGTCAGTCGGTCGATATATGTCGTG
TGCCGTTATATCGTCCGTGC

Downstream 100 bases:

>100_bases
GGGCGCGGCGGACGATGAGCACGGAGAGACCCGACCCGCGGTCGCACCAGAGCGGCGCCGAACCGCCCGGTCCGGAGACC
GCCTACCGCCGGTTGCTGCT

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family Protein; PadR Family Transcriptional Regulator; Transcriptional Regulator-Like Protein

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MAMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVRVEREEVVNGRLRRYYSLTDD
GAGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARVTRLAPPSVPAIG

Sequences:

>Translated_132_residues
MAMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVRVEREEVVNGRLRRYYSLTDD
GAGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARVTRLAPPSVPAIG
>Mature_131_residues
AMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVRVEREEVVNGRLRRYYSLTDDG
AGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARVTRLAPPSVPAIG

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14388; Mature: 14257

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVR
CCCCHHCCCHHEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCEEE
VEREEVVNGRLRRYYSLTDDGAGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARV
EHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH
TRLAPPSVPAIG
HHCCCCCCCCCC
>Mature Secondary Structure 
AMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVR
CCCHHCCCHHEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCEEE
VEREEVVNGRLRRYYSLTDDGAGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARV
EHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH
TRLAPPSVPAIG
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA