| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yqjI [C]
Identifier: 158313053
GI number: 158313053
Start: 1435007
End: 1435405
Strand: Direct
Name: yqjI [C]
Synonym: Franean1_1201
Alternate gene names: 158313053
Gene position: 1435007-1435405 (Clockwise)
Preceding gene: 158313052
Following gene: 158313054
Centisome position: 15.98
GC content: 74.94
Gene sequence:
>399_bases ATGGCAATGGAGGACATGCGGGAACCGACGTTCCTGGTGCTCGCCGCGCTGGCTGACGGCCCGCGCCACGGGTACGCGGT GATCCGCGAGGTCACGGACATCTCCGGCGGTCGGGTGACCATGCGGCCGGGCACGCTCTACGGCGCTCTGGACCGCCTCG CCGGCGAGGGCCTCGTGCGGGTCGAACGCGAGGAGGTCGTCAACGGGCGGCTGCGGCGGTACTACTCGCTGACCGATGAC GGGGCGGGCGCGCTCACGGAGCAGACCGAGCGGCTGCGGGCCAACGTCGCCGAGGCTGACCGCAGGCTGCGCCTGCGCGT CCGGCCCGCCACCGGCCCGGCGACGGCGTTCGCCCGGGTGACCAGGCTGGCGCCCCCGAGCGTGCCGGCGATCGGCTGA
Upstream 100 bases:
>100_bases AGGCGGCCCTCCCGGCCCTGGACCTCACGGTCCAGGGCCGGTTCTCCGCCCTGATGGTCAGTCGGTCGATATATGTCGTG TGCCGTTATATCGTCCGTGC
Downstream 100 bases:
>100_bases GGGCGCGGCGGACGATGAGCACGGAGAGACCCGACCCGCGGTCGCACCAGAGCGGCGCCGAACCGCCCGGTCCGGAGACC GCCTACCGCCGGTTGCTGCT
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family Protein; PadR Family Transcriptional Regulator; Transcriptional Regulator-Like Protein
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MAMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVRVEREEVVNGRLRRYYSLTDD GAGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARVTRLAPPSVPAIG
Sequences:
>Translated_132_residues MAMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVRVEREEVVNGRLRRYYSLTDD GAGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARVTRLAPPSVPAIG >Mature_131_residues AMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVRVEREEVVNGRLRRYYSLTDDG AGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARVTRLAPPSVPAIG
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14388; Mature: 14257
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVR CCCCHHCCCHHEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCEEE VEREEVVNGRLRRYYSLTDDGAGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARV EHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH TRLAPPSVPAIG HHCCCCCCCCCC >Mature Secondary Structure AMEDMREPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVR CCCHHCCCHHEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCEEE VEREEVVNGRLRRYYSLTDDGAGALTEQTERLRANVAEADRRLRLRVRPATGPATAFARV EHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH TRLAPPSVPAIG HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA