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The map label for this gene is yfhP [C]

Identifier: 158313027

GI number: 158313027

Start: 1399575

End: 1400030

Strand: Direct

Name: yfhP [C]

Synonym: Franean1_1175

Alternate gene names: 158313027

Gene position: 1399575-1400030 (Clockwise)

Preceding gene: 158313026

Following gene: 158313028

Centisome position: 15.58

GC content: 72.59

Gene sequence:

>456_bases
ATGCAGATCTCCGCCCGGGCCGACTACGCACTGCGGGCCCTGCTCACGCTCGCCGCGTCGGACGGCAGCCTCGTGAAGGG
GGAGACGCTCGCCTCGGCCCAGGATCTTCCCCTGCGCTTCCTCGAGAACATCCTCACCGACCTGCGCCGCAGCGGCCTCG
TGCAGAGCCGCCGCGGCGCCGACGGCGGCTACCAGCTGTGCCGCCCAGCCGAGGAGATCACGATCGCGACCGTGATCCGG
GCGACCGACGGCCCGCTCGCCAGCGTGCGCGGCCGCCCTCCGGAGAACGCCCAGTACGAGGGCGCGGCCAAGCACCTGCA
GGACGTCTGGATCGCCGTCCGGGTCAACCTGCGCCGGGTGCTCGAGTCGGTGACCCTCGCGGACGTCGCCAGCGGGAAGC
TGCCCGACATCGTCCGTGACCTGAGGGACGAGCCCGACGCCTGGGTCACCCGATAG

Upstream 100 bases:

>100_bases
GCGGCGACTCGAGCAGCTGACGGGCACCCGGACCTCGGCCGGCGGCATCTCGGACAGACCAGAGGGAGCCCTGCCGACGT
TCGGGCGGCAAGATGGGGAC

Downstream 100 bases:

>100_bases
CGCGGGCGCCGGTGGGCTTCTCCTGGTTCGCCCCGGACGCGGTGCCGGCCGTCGACGGGACACCCCTCCCGGACGACCGC
AAGCCGCTCGCGGCCGTGGT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MQISARADYALRALLTLAASDGSLVKGETLASAQDLPLRFLENILTDLRRSGLVQSRRGADGGYQLCRPAEEITIATVIR
ATDGPLASVRGRPPENAQYEGAAKHLQDVWIAVRVNLRRVLESVTLADVASGKLPDIVRDLRDEPDAWVTR

Sequences:

>Translated_151_residues
MQISARADYALRALLTLAASDGSLVKGETLASAQDLPLRFLENILTDLRRSGLVQSRRGADGGYQLCRPAEEITIATVIR
ATDGPLASVRGRPPENAQYEGAAKHLQDVWIAVRVNLRRVLESVTLADVASGKLPDIVRDLRDEPDAWVTR
>Mature_151_residues
MQISARADYALRALLTLAASDGSLVKGETLASAQDLPLRFLENILTDLRRSGLVQSRRGADGGYQLCRPAEEITIATVIR
ATDGPLASVRGRPPENAQYEGAAKHLQDVWIAVRVNLRRVLESVTLADVASGKLPDIVRDLRDEPDAWVTR

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16473; Mature: 16473

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISARADYALRALLTLAASDGSLVKGETLASAQDLPLRFLENILTDLRRSGLVQSRRGA
CCCCCHHHHHHHHHHHHHCCCCCEECCCHHCCCCCCCHHHHHHHHHHHHHHCCHHHCCCC
DGGYQLCRPAEEITIATVIRATDGPLASVRGRPPENAQYEGAAKHLQDVWIAVRVNLRRV
CCCHHHHCCHHHHHHHHHEECCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LESVTLADVASGKLPDIVRDLRDEPDAWVTR
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQISARADYALRALLTLAASDGSLVKGETLASAQDLPLRFLENILTDLRRSGLVQSRRGA
CCCCCHHHHHHHHHHHHHCCCCCEECCCHHCCCCCCCHHHHHHHHHHHHHHCCHHHCCCC
DGGYQLCRPAEEITIATVIRATDGPLASVRGRPPENAQYEGAAKHLQDVWIAVRVNLRRV
CCCHHHHCCHHHHHHHHHEECCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LESVTLADVASGKLPDIVRDLRDEPDAWVTR
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]