| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is gph [C]
Identifier: 158313028
GI number: 158313028
Start: 1400042
End: 1401055
Strand: Direct
Name: gph [C]
Synonym: Franean1_1176
Alternate gene names: 158313028
Gene position: 1400042-1401055 (Clockwise)
Preceding gene: 158313027
Following gene: 158313031
Centisome position: 15.59
GC content: 74.95
Gene sequence:
>1014_bases GTGGGCTTCTCCTGGTTCGCCCCGGACGCGGTGCCGGCCGTCGACGGGACACCCCTCCCGGACGACCGCAAGCCGCTCGC GGCCGTGGTGTTCGACTGGGGCGGGACGCTCACCCTCTTCCACGACGTCGACCTGCTCGACCTGTGGCGGATGACCGCGC TGGAGATCTCGTCCGCACACGCCGACGAGATCACCGCGATCCTGGCTGGCCTGGAGACGACCTGGTGGCATGCCCGGGAC GGCAGCGACGGCCTGGCCGGCAACGGCGCGGCGGGCGGTATGACCGGGTCGGTCACCGAACTGCTTGCGGCCGCCTCCGC GGCCCTCGGCGTGGACGTGGCCGCGGCCGTGCTGCGCGCGGTCAGCCGGCGCGACCTCGCAGCCTGGACCCCGCACACGG TGTGCGATCCCGAGGCACTGCTGCTCGTGCACCTCGTGCGTGCCCGCGGCCTGCTCGTCGGCCTGCTCACCAACACCCGC TGGCCACGGGCCTGGCACGAGCGCCTACTCGAACGCGACGGCCTGCTCGACCTCTTCCACGCCAGGATCTACACGAGCGA CCTCCCTTTCGACAAGCCACACCCGATCGCCTTCCAGGCGGTGCTGGCCGCACTGGGCGTCACCGACCCGTCCCGGGTGC TCTTCGTCGGCGACCGGCTGCGGACGGACATCCGCGGCGCGCGGGCGGCCGGCATGCGGGCTGTGCTGGTCGCGGACGGT GGCTTCGCGGACGGCGGATTGGCGGACGGCGCCGCGGCGGGCCTCGGCGGTGGTCCCGGCGGCGTGGTCCTCGATCCGCG TGATCCCCTTGGGCTGGCGGTGGCGGGCCGCGATCTCGCAGGGCGGGCCGACCTGGGCCGAGACCCCGCCGCGCGGGATC TGCCCGGTGCGGACGGGGCCGGGGCGTCCGCGTCGATGCTCGCGGATGCGGTGATCGGCCGCCTCGGCCACCTGCTCGAG GTCCTCGACCTGCTCGGCGCCCCCGGGCCTGGGTCACCCGCCCCACGTCGCTGA
Upstream 100 bases:
>100_bases CGGTGACCCTCGCGGACGTCGCCAGCGGGAAGCTGCCCGACATCGTCCGTGACCTGAGGGACGAGCCCGACGCCTGGGTC ACCCGATAGCGCGGGCGCCG
Downstream 100 bases:
>100_bases ACGGCCTCTCCGGATGCGCCCGGCGGGAGAGCCGCCGAGCGTGTTGTCCGGGCCGGGTTGTGTGCTGCTCGTGTGACTCG CTTCGGGGCGGGCGCGGGTC
Product: HAD family hydrolase
Products: Glycolate; Phosphate [C]
Alternate protein names: HAD-Superfamily Hydrolase
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MGFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAHADEITAILAGLETTWWHARD GSDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRAVSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTR WPRAWHERLLERDGLLDLFHARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADG GFADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGAGASASMLADAVIGRLGHLLE VLDLLGAPGPGSPAPRR
Sequences:
>Translated_337_residues MGFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAHADEITAILAGLETTWWHARD GSDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRAVSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTR WPRAWHERLLERDGLLDLFHARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADG GFADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGAGASASMLADAVIGRLGHLLE VLDLLGAPGPGSPAPRR >Mature_336_residues GFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAHADEITAILAGLETTWWHARDG SDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRAVSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTRW PRAWHERLLERDGLLDLFHARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADGG FADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGAGASASMLADAVIGRLGHLLEV LDLLGAPGPGSPAPRR
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 34785; Mature: 34654
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAH CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCC ADEITAILAGLETTWWHARDGSDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRA HHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTRWPRAWHERLLERDGLLDLFH HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCHHHHHHHHHHCCHHHHHH ARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADG HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCEEEEEECC GFADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGA CCCCCCCCCCHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GASASMLADAVIGRLGHLLEVLDLLGAPGPGSPAPRR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAH CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCC ADEITAILAGLETTWWHARDGSDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRA HHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTRWPRAWHERLLERDGLLDLFH HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCHHHHHHHHHHCCHHHHHH ARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADG HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCEEEEEECC GFADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGA CCCCCCCCCCHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GASASMLADAVIGRLGHLLEVLDLLGAPGPGSPAPRR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA