Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is gph [C]

Identifier: 158313028

GI number: 158313028

Start: 1400042

End: 1401055

Strand: Direct

Name: gph [C]

Synonym: Franean1_1176

Alternate gene names: 158313028

Gene position: 1400042-1401055 (Clockwise)

Preceding gene: 158313027

Following gene: 158313031

Centisome position: 15.59

GC content: 74.95

Gene sequence:

>1014_bases
GTGGGCTTCTCCTGGTTCGCCCCGGACGCGGTGCCGGCCGTCGACGGGACACCCCTCCCGGACGACCGCAAGCCGCTCGC
GGCCGTGGTGTTCGACTGGGGCGGGACGCTCACCCTCTTCCACGACGTCGACCTGCTCGACCTGTGGCGGATGACCGCGC
TGGAGATCTCGTCCGCACACGCCGACGAGATCACCGCGATCCTGGCTGGCCTGGAGACGACCTGGTGGCATGCCCGGGAC
GGCAGCGACGGCCTGGCCGGCAACGGCGCGGCGGGCGGTATGACCGGGTCGGTCACCGAACTGCTTGCGGCCGCCTCCGC
GGCCCTCGGCGTGGACGTGGCCGCGGCCGTGCTGCGCGCGGTCAGCCGGCGCGACCTCGCAGCCTGGACCCCGCACACGG
TGTGCGATCCCGAGGCACTGCTGCTCGTGCACCTCGTGCGTGCCCGCGGCCTGCTCGTCGGCCTGCTCACCAACACCCGC
TGGCCACGGGCCTGGCACGAGCGCCTACTCGAACGCGACGGCCTGCTCGACCTCTTCCACGCCAGGATCTACACGAGCGA
CCTCCCTTTCGACAAGCCACACCCGATCGCCTTCCAGGCGGTGCTGGCCGCACTGGGCGTCACCGACCCGTCCCGGGTGC
TCTTCGTCGGCGACCGGCTGCGGACGGACATCCGCGGCGCGCGGGCGGCCGGCATGCGGGCTGTGCTGGTCGCGGACGGT
GGCTTCGCGGACGGCGGATTGGCGGACGGCGCCGCGGCGGGCCTCGGCGGTGGTCCCGGCGGCGTGGTCCTCGATCCGCG
TGATCCCCTTGGGCTGGCGGTGGCGGGCCGCGATCTCGCAGGGCGGGCCGACCTGGGCCGAGACCCCGCCGCGCGGGATC
TGCCCGGTGCGGACGGGGCCGGGGCGTCCGCGTCGATGCTCGCGGATGCGGTGATCGGCCGCCTCGGCCACCTGCTCGAG
GTCCTCGACCTGCTCGGCGCCCCCGGGCCTGGGTCACCCGCCCCACGTCGCTGA

Upstream 100 bases:

>100_bases
CGGTGACCCTCGCGGACGTCGCCAGCGGGAAGCTGCCCGACATCGTCCGTGACCTGAGGGACGAGCCCGACGCCTGGGTC
ACCCGATAGCGCGGGCGCCG

Downstream 100 bases:

>100_bases
ACGGCCTCTCCGGATGCGCCCGGCGGGAGAGCCGCCGAGCGTGTTGTCCGGGCCGGGTTGTGTGCTGCTCGTGTGACTCG
CTTCGGGGCGGGCGCGGGTC

Product: HAD family hydrolase

Products: Glycolate; Phosphate [C]

Alternate protein names: HAD-Superfamily Hydrolase

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MGFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAHADEITAILAGLETTWWHARD
GSDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRAVSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTR
WPRAWHERLLERDGLLDLFHARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADG
GFADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGAGASASMLADAVIGRLGHLLE
VLDLLGAPGPGSPAPRR

Sequences:

>Translated_337_residues
MGFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAHADEITAILAGLETTWWHARD
GSDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRAVSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTR
WPRAWHERLLERDGLLDLFHARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADG
GFADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGAGASASMLADAVIGRLGHLLE
VLDLLGAPGPGSPAPRR
>Mature_336_residues
GFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAHADEITAILAGLETTWWHARDG
SDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRAVSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTRW
PRAWHERLLERDGLLDLFHARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADGG
FADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGAGASASMLADAVIGRLGHLLEV
LDLLGAPGPGSPAPRR

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.18 [C]

Molecular weight: Translated: 34785; Mature: 34654

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAH
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCC
ADEITAILAGLETTWWHARDGSDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRA
HHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTRWPRAWHERLLERDGLLDLFH
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCHHHHHHHHHHCCHHHHHH
ARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADG
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCEEEEEECC
GFADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGA
CCCCCCCCCCHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
GASASMLADAVIGRLGHLLEVLDLLGAPGPGSPAPRR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GFSWFAPDAVPAVDGTPLPDDRKPLAAVVFDWGGTLTLFHDVDLLDLWRMTALEISSAH
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCC
ADEITAILAGLETTWWHARDGSDGLAGNGAAGGMTGSVTELLAAASAALGVDVAAAVLRA
HHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VSRRDLAAWTPHTVCDPEALLLVHLVRARGLLVGLLTNTRWPRAWHERLLERDGLLDLFH
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCHHHHHHHHHHCCHHHHHH
ARIYTSDLPFDKPHPIAFQAVLAALGVTDPSRVLFVGDRLRTDIRGARAAGMRAVLVADG
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCEEEEEECC
GFADGGLADGAAAGLGGGPGGVVLDPRDPLGLAVAGRDLAGRADLGRDPAARDLPGADGA
CCCCCCCCCCHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
GASASMLADAVIGRLGHLLEVLDLLGAPGPGSPAPRR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.57 {phosphoglycolate}} [C]

Substrates: D-Glycerate 2-phosphatelyc; H2O [C]

Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]

General reaction: Additional information:

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA