| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yaeL [C]
Identifier: 158313021
GI number: 158313021
Start: 1392720
End: 1393901
Strand: Direct
Name: yaeL [C]
Synonym: Franean1_1169
Alternate gene names: 158313021
Gene position: 1392720-1393901 (Clockwise)
Preceding gene: 158313020
Following gene: 158313022
Centisome position: 15.51
GC content: 68.95
Gene sequence:
>1182_bases ATGGCAACTCTGGGCATCGTCGCCTTCGTCCTCGCCCTGTTCGTCTCGGTCGTCCTGCACGAGGCGGGGCACTTCGTCAC CGCCCGCTACTTCGGGATGAAGGCGTCCCGTTTCTTCGTCGGCTTCGGCCCCACCCTGTGGTCGAAGCAGCGCGGGGAGA CCGAGTACGGCATCAAGGCCATCCCCGCTGGCGGGTTCGTCAAGATCGAGGGAATGACCTCCCTCGAGGAGATCGACCCG GCGGACGAGCCCCGTGCCTTCTACAAGGCGCGGGCGCACGCCCGGCTGGTGGTGATGTCGGCGGGCTCGTTCGTGCACTT CGTCATCGCGATCGTGCTCATCTACGGGGTGCTGGTCACCATCGGCACCACCCAGACGAGCCAGACGAAGATCGGGCGCA TGAGCTGCGTGGCGACGACGGCCGACTGCACGGGCCCGGGGCCGGCGGCGGCAGCCGGGCTGCGGGTCGGCGACCGGGTG GTGAGCTTCGACGGTGTGGCCGTCACCACCTGGGACGGGTTCACCCAGCTCGTGCGCAATCACGGGCCGGGCCCGGCGGT GCTCGTGGTCTCCCGTGACGGCGCGGACGTGACGCTGCGGCCCGACCTGGTCGAGGTGCTGCGCGACCGCAGGACCGGCC TCGCGGGCACGGACCGGGTGGGCGCACTGGGGGTCAGGCCCGGTCAGGAGACCATCGACTACGGCCCGCTCTCGGCGGTT CCCGAGACCTTCCAGGTCATCGGCTCCGGGTTCACCGGGATGTACGACACGTTCGCGCACCGGATCGGTGACATCGGCCG CATCTTCGGTGACAACCGGGACGAGAGCGGCTTCATCAGCGTGGTCGGCGCCGCCCGGATCGGCGGCGAGGTGGCCGCCG CGGACCAGGGCTGGACCGACCGGATCCGCGGTTTCCTGATCCTCGTCGCCGCGATCAACCTCGCCATCGGGATCTTCAAC CTGCTGCCGCTGCTCCCGCTCGACGGCGGGCACATCGCGGTGCTCGGTTTCGAGCAGGCCCGACACGGCCTGCGTCGGCT GCGTGGCTATCGAGGCCCGGTGCAGCCGGTGGACTTCGCCAAGCTGTTACCAGCCACGTACGCCACGGTCGTCGTTCTTG TCGGGTTCAGTCTGATCATTCTGTCCGCCGACATCGTCAACCCCATCCGCATCAATCAGTAG
Upstream 100 bases:
>100_bases TGGACGAGGTGTTCGCCGTCGAACGTGAGGCCCGCGCCGCCGCGAACCGCCTGATCGAGAAGGCCGGCGGGCATCCCGTG GCGGCCGGAGGACATGGTTG
Downstream 100 bases:
>100_bases CTGCCGTGTACCCGCGGTGGCGCGCGGTGGTGGTCTGCGGACGTCCCGGTCGCCGGTAGCTCCGGTGCGGGCGTCGCGTC TGGCCGTCGTGAGTGCGCCG
Product: peptidase M50
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MATLGIVAFVLALFVSVVLHEAGHFVTARYFGMKASRFFVGFGPTLWSKQRGETEYGIKAIPAGGFVKIEGMTSLEEIDP ADEPRAFYKARAHARLVVMSAGSFVHFVIAIVLIYGVLVTIGTTQTSQTKIGRMSCVATTADCTGPGPAAAAGLRVGDRV VSFDGVAVTTWDGFTQLVRNHGPGPAVLVVSRDGADVTLRPDLVEVLRDRRTGLAGTDRVGALGVRPGQETIDYGPLSAV PETFQVIGSGFTGMYDTFAHRIGDIGRIFGDNRDESGFISVVGAARIGGEVAAADQGWTDRIRGFLILVAAINLAIGIFN LLPLLPLDGGHIAVLGFEQARHGLRRLRGYRGPVQPVDFAKLLPATYATVVVLVGFSLIILSADIVNPIRINQ
Sequences:
>Translated_393_residues MATLGIVAFVLALFVSVVLHEAGHFVTARYFGMKASRFFVGFGPTLWSKQRGETEYGIKAIPAGGFVKIEGMTSLEEIDP ADEPRAFYKARAHARLVVMSAGSFVHFVIAIVLIYGVLVTIGTTQTSQTKIGRMSCVATTADCTGPGPAAAAGLRVGDRV VSFDGVAVTTWDGFTQLVRNHGPGPAVLVVSRDGADVTLRPDLVEVLRDRRTGLAGTDRVGALGVRPGQETIDYGPLSAV PETFQVIGSGFTGMYDTFAHRIGDIGRIFGDNRDESGFISVVGAARIGGEVAAADQGWTDRIRGFLILVAAINLAIGIFN LLPLLPLDGGHIAVLGFEQARHGLRRLRGYRGPVQPVDFAKLLPATYATVVVLVGFSLIILSADIVNPIRINQ >Mature_392_residues ATLGIVAFVLALFVSVVLHEAGHFVTARYFGMKASRFFVGFGPTLWSKQRGETEYGIKAIPAGGFVKIEGMTSLEEIDPA DEPRAFYKARAHARLVVMSAGSFVHFVIAIVLIYGVLVTIGTTQTSQTKIGRMSCVATTADCTGPGPAAAAGLRVGDRVV SFDGVAVTTWDGFTQLVRNHGPGPAVLVVSRDGADVTLRPDLVEVLRDRRTGLAGTDRVGALGVRPGQETIDYGPLSAVP ETFQVIGSGFTGMYDTFAHRIGDIGRIFGDNRDESGFISVVGAARIGGEVAAADQGWTDRIRGFLILVAAINLAIGIFNL LPLLPLDGGHIAVLGFEQARHGLRRLRGYRGPVQPVDFAKLLPATYATVVVLVGFSLIILSADIVNPIRINQ
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=224, Percent_Identity=29.9107142857143, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 41775; Mature: 41644
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLGIVAFVLALFVSVVLHEAGHFVTARYFGMKASRFFVGFGPTLWSKQRGETEYGIKA CCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCEECEEEEEECCCCCCCCCCCCCCCEEE IPAGGFVKIEGMTSLEEIDPADEPRAFYKARAHARLVVMSAGSFVHFVIAIVLIYGVLVT ECCCCEEEECCCCCHHHCCCCCCCHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHH IGTTQTSQTKIGRMSCVATTADCTGPGPAAAAGLRVGDRVVSFDGVAVTTWDGFTQLVRN HCCCCCCCHHCCCEEEEEEECCCCCCCCHHHHCCCCCCEEEEECCEEEEECHHHHHHHHC HGPGPAVLVVSRDGADVTLRPDLVEVLRDRRTGLAGTDRVGALGVRPGQETIDYGPLSAV CCCCCEEEEEECCCCCEEECHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC PETFQVIGSGFTGMYDTFAHRIGDIGRIFGDNRDESGFISVVGAARIGGEVAAADQGWTD CHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCEEEECCCCHHH RIRGFLILVAAINLAIGIFNLLPLLPLDGGHIAVLGFEQARHGLRRLRGYRGPVQPVDFA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHH KLLPATYATVVVLVGFSLIILSADIVNPIRINQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC >Mature Secondary Structure ATLGIVAFVLALFVSVVLHEAGHFVTARYFGMKASRFFVGFGPTLWSKQRGETEYGIKA CHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCEECEEEEEECCCCCCCCCCCCCCCEEE IPAGGFVKIEGMTSLEEIDPADEPRAFYKARAHARLVVMSAGSFVHFVIAIVLIYGVLVT ECCCCEEEECCCCCHHHCCCCCCCHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHH IGTTQTSQTKIGRMSCVATTADCTGPGPAAAAGLRVGDRVVSFDGVAVTTWDGFTQLVRN HCCCCCCCHHCCCEEEEEEECCCCCCCCHHHHCCCCCCEEEEECCEEEEECHHHHHHHHC HGPGPAVLVVSRDGADVTLRPDLVEVLRDRRTGLAGTDRVGALGVRPGQETIDYGPLSAV CCCCCEEEEEECCCCCEEECHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC PETFQVIGSGFTGMYDTFAHRIGDIGRIFGDNRDESGFISVVGAARIGGEVAAADQGWTD CHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCEEEECCCCHHH RIRGFLILVAAINLAIGIFNLLPLLPLDGGHIAVLGFEQARHGLRRLRGYRGPVQPVDFA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHH KLLPATYATVVVLVGFSLIILSADIVNPIRINQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]