| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pyrH [H]
Identifier: 158313015
GI number: 158313015
Start: 1385910
End: 1386707
Strand: Direct
Name: pyrH [H]
Synonym: Franean1_1163
Alternate gene names: 158313015
Gene position: 1385910-1386707 (Clockwise)
Preceding gene: 158313014
Following gene: 158313016
Centisome position: 15.43
GC content: 69.92
Gene sequence:
>798_bases GTGACCGATGACGCCGACAGTGCCGTTGGAGGGGTGGATCCCGCCGCCCGCACCGAGCCCGGGCCGCGGTGGACCCGCCT CCTGCTGAAACTCTCCGGCGAGGCCTTCGCCGGTGGTGAGCCGCTCGGGATCGACCCGGTGACGCTGGCGACGATCGCGC GCCAGATCGCCCAGGTGAGCCGCTCGGGCATCGAGGTCGCCATAGTCGTGGGGGCCGGCAACATGTTCCGCGGCCAGGCG CTCGCCGAGCGGGGCATGGACCGCGCCCGCGCCGACTACATGGGCATGCTGGGCACGGTCATCAACTGCCTGGCCCTGCA GGACGTCCTGGAGCGCGAGGGGATCGTCACCCGCGTGCAGACGGCGATCGCCATGGGCCAGGTCGCCGAGCCCTACCTCC CCCTGCGCGCGATCCGGCACCTGGAGAAGGGGCGCGTGGTCATCTTCGGCGCCGGCCTTGGGGCACCGTTCTTCTCGACG GACACCACCGCCGCCCAGCGGGCACTGGAGATCAAGGCGCAGGCGGTACTCAAGGCGACGAAGGTCGACGGGGTCTACGA CTCCGATCCGGCGACGAACGCCGGCGCCGTCCGGTTCGACAGCCTCACCTACAGCGAGGTCCTCGCGCGCGGCCTGAAGG TCATGGACGCGACCGCGATCAGCCTGTGCATGGACAACGACCTGCCCATTGTCGTTTTCGACCTCCTGACCGAGGGGAAC ATCTCCCGCGCCGTCCGGGGTGAGAAGATCGGCACGCTGGTCGGAGTCGAGACGTACGGAACGGAAGGTACGCGGTGA
Upstream 100 bases:
>100_bases ACGCGGGGCCACGGGCAGCCGTGCCGGAGTCGTGCGGCAGACTGCTGTCAGCATGAACATCCTTGGCCGCTGATCCCGGC CGCCGGCGAAGGAGCCGCCC
Downstream 100 bases:
>100_bases TCGACGACACGCTCCTCGAGGCCGAGGAGAAGATGGACAAGGCCGTCTCGGTCGCCAAGGACGACTTCGCCAACATCCGC ACGGGGCGGATCACGCCAGC
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTDDADSAVGGVDPAARTEPGPRWTRLLLKLSGEAFAGGEPLGIDPVTLATIARQIAQVSRSGIEVAIVVGAGNMFRGQA LAERGMDRARADYMGMLGTVINCLALQDVLEREGIVTRVQTAIAMGQVAEPYLPLRAIRHLEKGRVVIFGAGLGAPFFST DTTAAQRALEIKAQAVLKATKVDGVYDSDPATNAGAVRFDSLTYSEVLARGLKVMDATAISLCMDNDLPIVVFDLLTEGN ISRAVRGEKIGTLVGVETYGTEGTR
Sequences:
>Translated_265_residues MTDDADSAVGGVDPAARTEPGPRWTRLLLKLSGEAFAGGEPLGIDPVTLATIARQIAQVSRSGIEVAIVVGAGNMFRGQA LAERGMDRARADYMGMLGTVINCLALQDVLEREGIVTRVQTAIAMGQVAEPYLPLRAIRHLEKGRVVIFGAGLGAPFFST DTTAAQRALEIKAQAVLKATKVDGVYDSDPATNAGAVRFDSLTYSEVLARGLKVMDATAISLCMDNDLPIVVFDLLTEGN ISRAVRGEKIGTLVGVETYGTEGTR >Mature_264_residues TDDADSAVGGVDPAARTEPGPRWTRLLLKLSGEAFAGGEPLGIDPVTLATIARQIAQVSRSGIEVAIVVGAGNMFRGQAL AERGMDRARADYMGMLGTVINCLALQDVLEREGIVTRVQTAIAMGQVAEPYLPLRAIRHLEKGRVVIFGAGLGAPFFSTD TTAAQRALEIKAQAVLKATKVDGVYDSDPATNAGAVRFDSLTYSEVLARGLKVMDATAISLCMDNDLPIVVFDLLTEGNI SRAVRGEKIGTLVGVETYGTEGTR
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=237, Percent_Identity=48.5232067510549, Blast_Score=219, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 27964; Mature: 27833
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDADSAVGGVDPAARTEPGPRWTRLLLKLSGEAFAGGEPLGIDPVTLATIARQIAQVS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RSGIEVAIVVGAGNMFRGQALAERGMDRARADYMGMLGTVINCLALQDVLEREGIVTRVQ HCCCEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TAIAMGQVAEPYLPLRAIRHLEKGRVVIFGAGLGAPFFSTDTTAAQRALEIKAQAVLKAT HHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KVDGVYDSDPATNAGAVRFDSLTYSEVLARGLKVMDATAISLCMDNDLPIVVFDLLTEGN HCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCC ISRAVRGEKIGTLVGVETYGTEGTR HHHHHCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure TDDADSAVGGVDPAARTEPGPRWTRLLLKLSGEAFAGGEPLGIDPVTLATIARQIAQVS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RSGIEVAIVVGAGNMFRGQALAERGMDRARADYMGMLGTVINCLALQDVLEREGIVTRVQ HCCCEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TAIAMGQVAEPYLPLRAIRHLEKGRVVIFGAGLGAPFFSTDTTAAQRALEIKAQAVLKAT HHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KVDGVYDSDPATNAGAVRFDSLTYSEVLARGLKVMDATAISLCMDNDLPIVVFDLLTEGN HCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCC ISRAVRGEKIGTLVGVETYGTEGTR HHHHHCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA