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The map label for this gene is tsf [H]

Identifier: 158313014

GI number: 158313014

Start: 1384846

End: 1385625

Strand: Direct

Name: tsf [H]

Synonym: Franean1_1162

Alternate gene names: 158313014

Gene position: 1384846-1385625 (Clockwise)

Preceding gene: 158313013

Following gene: 158313015

Centisome position: 15.42

GC content: 68.97

Gene sequence:

>780_bases
GTGCGACTGTCGGGGCGGGCGACCCCTGGGAGGACGGACGTCGACCGCCGCGGGCGGGCGACGAGCGGCCCCGGGGGCGC
CTCTGCGCGGCGGCGTCGCGTGTGTTTCGGCGCCGAGACAGAACGCCCACCATCGCCAGCAATCGGAACTGACGAGAAGA
GCACCATGGCAGACATCACAGCCGCCGACATCCGCAAGCTCCGGGAACTGACCGGCGCGGGGATGAGCGACGTCAAGAAG
GCGCTCGTCGACCACGACGGTGACTTCGAGAAGGCCAAGTCCTGGCTGCGCGAGAAGGGCCTCGCGCAGGTCGCCAAGCG
GGCGGGCCGCAGCACGGCGAACGGGCTGGTCGAGTCGTACCTGCACCGTACCGACCCGCAGCTCCCGCCGACGCTCGGCG
TGCTCATCGAGCTGCGTTGCGAGACCGACTTCGTCGCCAAGACCGACGACTTCAAGCAGCTCGCGCGGGACCTCGCCCAG
CACATCGCCGCGGCGGACCCGCTGTACGTGACCGCCGAGCAGATCCCGAACGAGGTGCTCGAGCAGGAGCGGAAGATCTA
CGAGGCGGCCGCCCGCGAAGAGGGCAAGAACGACAAGGCCATCCCGAAGATCGTCGAGGGTCGGGTCAACGGCTACGTCA
AGAGCGTCGTCCTGCTGGACCAGCCCTGGGTCAAGGACGGCAAGCTCACGATCCGCGCGCTGCTGGAGCAGGCCGGGTCC
GCGCTGGGTGAGAAGATCGAAGTGGGCCGGTTCGCCCGGTTCAACATCAAGCAGGCCTGA

Upstream 100 bases:

>100_bases
GCGGTCGGCACCGCGGTCTGACACATCCTGGTCTCACGCGGGTCTCCGGGGGCGTGACCACGTCCCCGGAGACCCCGTTC
CAGCCCCGGTAGGGCCGTCC

Downstream 100 bases:

>100_bases
GCGCGAGCGCACCGCGCCGGGCGACGTGACACGGCCGGGCACCCGGTGGGGGAGGACCTCCGCGGGCGTCCGGCCGCCAG
TCCGTGCGGCCCGGGTGCGG

Product: translation elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRLSGRATPGRTDVDRRGRATSGPGGASARRRRVCFGAETERPPSPAIGTDEKSTMADITAADIRKLRELTGAGMSDVKK
ALVDHDGDFEKAKSWLREKGLAQVAKRAGRSTANGLVESYLHRTDPQLPPTLGVLIELRCETDFVAKTDDFKQLARDLAQ
HIAAADPLYVTAEQIPNEVLEQERKIYEAAAREEGKNDKAIPKIVEGRVNGYVKSVVLLDQPWVKDGKLTIRALLEQAGS
ALGEKIEVGRFARFNIKQA

Sequences:

>Translated_259_residues
MRLSGRATPGRTDVDRRGRATSGPGGASARRRRVCFGAETERPPSPAIGTDEKSTMADITAADIRKLRELTGAGMSDVKK
ALVDHDGDFEKAKSWLREKGLAQVAKRAGRSTANGLVESYLHRTDPQLPPTLGVLIELRCETDFVAKTDDFKQLARDLAQ
HIAAADPLYVTAEQIPNEVLEQERKIYEAAAREEGKNDKAIPKIVEGRVNGYVKSVVLLDQPWVKDGKLTIRALLEQAGS
ALGEKIEVGRFARFNIKQA
>Mature_259_residues
MRLSGRATPGRTDVDRRGRATSGPGGASARRRRVCFGAETERPPSPAIGTDEKSTMADITAADIRKLRELTGAGMSDVKK
ALVDHDGDFEKAKSWLREKGLAQVAKRAGRSTANGLVESYLHRTDPQLPPTLGVLIELRCETDFVAKTDDFKQLARDLAQ
HIAAADPLYVTAEQIPNEVLEQERKIYEAAAREEGKNDKAIPKIVEGRVNGYVKSVVLLDQPWVKDGKLTIRALLEQAGS
ALGEKIEVGRFARFNIKQA

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Escherichia coli, GI1786366, Length=100, Percent_Identity=41, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 28358; Mature: 28358

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS01126 EF_TS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSGRATPGRTDVDRRGRATSGPGGASARRRRVCFGAETERPPSPAIGTDEKSTMADIT
CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHH
AADIRKLRELTGAGMSDVKKALVDHDGDFEKAKSWLREKGLAQVAKRAGRSTANGLVESY
HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LHRTDPQLPPTLGVLIELRCETDFVAKTDDFKQLARDLAQHIAAADPLYVTAEQIPNEVL
HHHCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
EQERKIYEAAAREEGKNDKAIPKIVEGRVNGYVKSVVLLDQPWVKDGKLTIRALLEQAGS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH
ALGEKIEVGRFARFNIKQA
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRLSGRATPGRTDVDRRGRATSGPGGASARRRRVCFGAETERPPSPAIGTDEKSTMADIT
CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHH
AADIRKLRELTGAGMSDVKKALVDHDGDFEKAKSWLREKGLAQVAKRAGRSTANGLVESY
HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LHRTDPQLPPTLGVLIELRCETDFVAKTDDFKQLARDLAQHIAAADPLYVTAEQIPNEVL
HHHCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
EQERKIYEAAAREEGKNDKAIPKIVEGRVNGYVKSVVLLDQPWVKDGKLTIRALLEQAGS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH
ALGEKIEVGRFARFNIKQA
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA