| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is marR [C]
Identifier: 158312932
GI number: 158312932
Start: 1284352
End: 1284858
Strand: Direct
Name: marR [C]
Synonym: Franean1_1078
Alternate gene names: 158312932
Gene position: 1284352-1284858 (Clockwise)
Preceding gene: 158312931
Following gene: 158312933
Centisome position: 14.3
GC content: 71.99
Gene sequence:
>507_bases GTGTCACAGCCGAAACCGCTTCCGACCGACCCGATCGCGGAGGCGCACCGGCAGTGGACCGCCCACGGATGGGGGCCCGT CGCGGACGGCATGGCCGCCGTCACCTCGCTGATGCGCGCGCAGCAGATCCTGCTCGCCCGGGTCGACGAGGTCCTGCGGC CCCTCGATCTCACCTTCGCCCGCTACGAGCTGCTCATGCTCCTGCTGTTCAGCCGCAAGGGCTCGCTGCCGCTGAGCCGC ATCGGGAGCCTGTTGCAGGTGCACCCGACCAGCGTCACCAGCGCCGTGGACAGGCTGGAGGCCCGCGGGCAGGTGCGCCG CCTGCCGCATCCGACGGATCGGCGCGCGATCCTCGCCGAGATCACCGAGGACGGGCGGTCGACGGCGCTCGCGGCCACCG AGAAGCTCAACGACACGGTGTTCGCCGACCCCGGGCTTCCTGACAGCGGTGTGCGGGACCTCGTCGAGCTGCTCACCGAC CTGCGGCGCGGTGCCGGCGACTTCTGA
Upstream 100 bases:
>100_bases GTTCCCGGATGCAACGGTCGTACGCCGGAATGGCTATTGTTGATGGCTCCGCTGTCGATGGTCTGCCGGCCCGACGATCC CGTCCTGGAGAATTGCACCC
Downstream 100 bases:
>100_bases CCCGCCCGGACCCGGACCCGGGCCAGCCGGTGCCCCGACCCGGTGTGCGGCCGGGTTCGGGCGGTCGTCCCGAGGCCGGG TGGGGCGCCCGAGTGGCGGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; Transcriptional Regulator; MarR-Transcriptional Regulator; Regulator Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator MarR Family Protein; Marr Family Transcriptional Regulator
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSQPKPLPTDPIAEAHRQWTAHGWGPVADGMAAVTSLMRAQQILLARVDEVLRPLDLTFARYELLMLLLFSRKGSLPLSR IGSLLQVHPTSVTSAVDRLEARGQVRRLPHPTDRRAILAEITEDGRSTALAATEKLNDTVFADPGLPDSGVRDLVELLTD LRRGAGDF
Sequences:
>Translated_168_residues MSQPKPLPTDPIAEAHRQWTAHGWGPVADGMAAVTSLMRAQQILLARVDEVLRPLDLTFARYELLMLLLFSRKGSLPLSR IGSLLQVHPTSVTSAVDRLEARGQVRRLPHPTDRRAILAEITEDGRSTALAATEKLNDTVFADPGLPDSGVRDLVELLTD LRRGAGDF >Mature_167_residues SQPKPLPTDPIAEAHRQWTAHGWGPVADGMAAVTSLMRAQQILLARVDEVLRPLDLTFARYELLMLLLFSRKGSLPLSRI GSLLQVHPTSVTSAVDRLEARGQVRRLPHPTDRRAILAEITEDGRSTALAATEKLNDTVFADPGLPDSGVRDLVELLTDL RRGAGDF
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18422; Mature: 18291
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPKPLPTDPIAEAHRQWTAHGWGPVADGMAAVTSLMRAQQILLARVDEVLRPLDLTFA CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYELLMLLLFSRKGSLPLSRIGSLLQVHPTSVTSAVDRLEARGQVRRLPHPTDRRAILAE HHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH ITEDGRSTALAATEKLNDTVFADPGLPDSGVRDLVELLTDLRRGAGDF HHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQPKPLPTDPIAEAHRQWTAHGWGPVADGMAAVTSLMRAQQILLARVDEVLRPLDLTFA CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYELLMLLLFSRKGSLPLSRIGSLLQVHPTSVTSAVDRLEARGQVRRLPHPTDRRAILAE HHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH ITEDGRSTALAATEKLNDTVFADPGLPDSGVRDLVELLTDLRRGAGDF HHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA