| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is glgP [H]
Identifier: 158312923
GI number: 158312923
Start: 1261820
End: 1264384
Strand: Direct
Name: glgP [H]
Synonym: Franean1_1069
Alternate gene names: 158312923
Gene position: 1261820-1264384 (Clockwise)
Preceding gene: 158312922
Following gene: 158312925
Centisome position: 14.05
GC content: 72.55
Gene sequence:
>2565_bases GTGAGAGCGCTGCGCCGATTCACTGTCCGTGCCCAGCTCCCGGAGCAGCTCGCTGCGCTGGGCGAGCTGGTTCTGAACCT TCGCTGGTCGTGGCATCCGGAGACCCTCGACCTGTTCGAGTCGGTCGATCCGGAGCTGTGGCGGGCCTGTGAGGGCGATC CCGTCCGGCTGCTCGGCGAGGTCGACCACGATCGGCTCGTGGCGCTCTCCGCCGACCGGAAGTTCCTGCGCCGGCTCTCC GACGCCGCCGACGACCTGCAGGAGTACCTGACCTCCGACCTCTGGTACCAGAAGCAGGCGATCCCGGGCGCACCCAGCGC CATCGCCTACTTCTCGCCGGAGTTCGGGATCACCGAGGTCCTCCCGCAGTACTCGGGCGGCCTGGGCATCCTCGCCGGCG ACCACCTGAAGACCGCCAGCGACCTCGGGGTGCCGATCATCGGGGTCGGCCTGCTCTACCGGGCCGGCTACTTCGTCCAG TCGCTGTCGCGGGACGGCTGGCAGCAGGAGCGCTACCCCGGTATCGACCCGCACGGCCTGCCGCTGACGCAGCTCACCGA CGACGAGGGCGCCCCGGTGAAGGTCGCCGTCGGCCTGCCCGAGGGGCGCACCCTGCACGCCCAGATCTGGAAGGCGCAGG TCGGACGGGTCCCGCTGCTGCTGCTCGACTCCGACGTCGAGGACAACCAGTCCGCCGAGCGGGGCGTCACCGACCGCCTC TACGGCGGCGGGACCGACCACCGGCTCCTCCAGGAGATGCTGCTGGGGATCGGCGGCGTCCGCGCGCTGCGCGCCTACGC GGCCGTCACCGGCTCGCCGGCGCCGGAGGTCTACCACACCAACGAGGGCCACGCCGGCTTCCTCGGGCTGGAGCGCATCC GCGAGCTCACCGAGACCGGGCTGAGCTTCGACGAGGCGCTGGAGGCCGCCCGCGCCGGCACGCTGTTCACCACCCACACG CCCGTGCCCGCCGGTATCGACCGGTTCCCGAAGGACCTGGTGGCCCGCCACTTCGGCGGCGACAACAGCTGGCCCGGCGT CCCGGTCGACCGGGTGCTCGAGCTCGGCGCCGAGCCCGACCCCAACGTGTTCAACATGGCCCACATGGGCCTGCGGCTGG CCCAGCGCTCCAACGGCGTCAGCAGCCTGCACGGCATCGTCAGCCGGGAGATGTTCGCCGGCCTGTGGCCCGGCTTCGAC CACGCCGAGGTGCCGATCGGCTCGGTGACCAACGGCGTGCACGCCCCGACCTGGGTCTCCCGCTCGATCACCGAGCTGGC CGACCGCCAGCCCGGCCCCGGCCTGCTCAGCGGCGGCGCCGAGGCCTTCACCCGGTTCGACAAGGTGTCCGACGAGGCCA TCTGGGCGACCCGGCGGGAACTGCGCGAGCAGCTCGTCGCCGAGATCCGGCGCCGGGTCCGCGTCTCCTGGCTGCAGCGC GGCGCGGCCCCCGGCGAGCTCGACTGGGTCGAGTCCGTCTTCGACCCGGACGTGCTCACCATCGGGTTCGCCCGCCGGGT GCCGTCCTACAAGCGGCTCACGCTGATGCTGCGCGACTCCGAGCGCCTCAAGCGGCTCCTGCTGCACGCCGACCGCCCCG TCCAGATGGTCATCGCGGGCAAGGCCCACCCGGCCGACGACGGCGGCAAGCTGCTCGTCCAGCAGATCGTCCAGTTCGCC GACAATCCGGCCGTGCGCCACCGGATCGTCTTCCTGCCCGACTACGACATCGGCATGGCCCGCTTCCTCTACGCCGGCTG CGACGTCTGGCTGAACAACCCGCTGCGCCCGCTCGAGGCGTGCGGCACGTCCGGGATGAAGGCGGCGCTCAACGGCTGCC TGAACCTCTCCATCCGGGACGGCTGGTGGGACGAGATGTTCGACGGTCAGAACGGTTGGGCCATCCCGACCGCGGACGGC GTCGAGGACCCCGACCGCCGCGACGACATCGAGTCGGCGGCCCTGTACGACCTGCTCGAGAACACGGTGACGGCGCGCTT CTACGACCGGGCGACGCCGACGTCCGCCCCGCCGCGGTGGACGGCGATGGTCAAGCACACCCTCTCCACGCTCGGCCCGC AGGTGCTGGCGACCCGGATGGTGCGCGAGTACGTCGAGCGTTACTACGTGCCCGCCGGGGTGTCGGCCCGCCAGGCCACC GAGGGCGACCTCGCCGGGGCGCGCGACCTCGCGGCCTGGAAGCACCGAGTGCGCAGCGCCTGGTCGGGCGTCCAGGTGCT CAACGTCGACTCGGCCGGGCTCGGGGACACCCCCCAGGTGGGCCAGTCGCTGGTCGTGCGGGCGACGGTCGACCTCGGCG GGCTCGACCCGGCCGACGTCGAGGTGATCGCCTCCTACGGCCGGGTGGACGAGACCGACCGCATCATGGCGCCCGGCACG CTCTCGCTGACCGACGTGGGCGAGGGGGAGGGCGGCCACGGCCACCGGTACGAGGGCACGATCCCGCTCGGCCGGACCGG CCCCTTCGGCTACACGGTGCGAGTCCTGCCCCGCCACCGCCTCACCGCAAGCCCAGCCGAACTCGGCCTGGTCACAAACC CCTGA
Upstream 100 bases:
>100_bases CCGTCTTGGGGGGATCGTGGAGAAGTTGTTGCGGCTCGGTAACCGGCGGGCCGAACCCGGGTGCGGCGAGTTCATGCACC CTGTTTAGGCTTCCCGTCTC
Downstream 100 bases:
>100_bases CCCACCCCCGCGCCCTGGGCCTCCGGCCTCCGGGCCCAGGGCGGCCGGCGTGGTTGCTGAGTGTCATCATGAACTCACTC AGCCGCCACACTGCGATCGG
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 854
Protein sequence:
>854_residues MRALRRFTVRAQLPEQLAALGELVLNLRWSWHPETLDLFESVDPELWRACEGDPVRLLGEVDHDRLVALSADRKFLRRLS DAADDLQEYLTSDLWYQKQAIPGAPSAIAYFSPEFGITEVLPQYSGGLGILAGDHLKTASDLGVPIIGVGLLYRAGYFVQ SLSRDGWQQERYPGIDPHGLPLTQLTDDEGAPVKVAVGLPEGRTLHAQIWKAQVGRVPLLLLDSDVEDNQSAERGVTDRL YGGGTDHRLLQEMLLGIGGVRALRAYAAVTGSPAPEVYHTNEGHAGFLGLERIRELTETGLSFDEALEAARAGTLFTTHT PVPAGIDRFPKDLVARHFGGDNSWPGVPVDRVLELGAEPDPNVFNMAHMGLRLAQRSNGVSSLHGIVSREMFAGLWPGFD HAEVPIGSVTNGVHAPTWVSRSITELADRQPGPGLLSGGAEAFTRFDKVSDEAIWATRRELREQLVAEIRRRVRVSWLQR GAAPGELDWVESVFDPDVLTIGFARRVPSYKRLTLMLRDSERLKRLLLHADRPVQMVIAGKAHPADDGGKLLVQQIVQFA DNPAVRHRIVFLPDYDIGMARFLYAGCDVWLNNPLRPLEACGTSGMKAALNGCLNLSIRDGWWDEMFDGQNGWAIPTADG VEDPDRRDDIESAALYDLLENTVTARFYDRATPTSAPPRWTAMVKHTLSTLGPQVLATRMVREYVERYYVPAGVSARQAT EGDLAGARDLAAWKHRVRSAWSGVQVLNVDSAGLGDTPQVGQSLVVRATVDLGGLDPADVEVIASYGRVDETDRIMAPGT LSLTDVGEGEGGHGHRYEGTIPLGRTGPFGYTVRVLPRHRLTASPAELGLVTNP
Sequences:
>Translated_854_residues MRALRRFTVRAQLPEQLAALGELVLNLRWSWHPETLDLFESVDPELWRACEGDPVRLLGEVDHDRLVALSADRKFLRRLS DAADDLQEYLTSDLWYQKQAIPGAPSAIAYFSPEFGITEVLPQYSGGLGILAGDHLKTASDLGVPIIGVGLLYRAGYFVQ SLSRDGWQQERYPGIDPHGLPLTQLTDDEGAPVKVAVGLPEGRTLHAQIWKAQVGRVPLLLLDSDVEDNQSAERGVTDRL YGGGTDHRLLQEMLLGIGGVRALRAYAAVTGSPAPEVYHTNEGHAGFLGLERIRELTETGLSFDEALEAARAGTLFTTHT PVPAGIDRFPKDLVARHFGGDNSWPGVPVDRVLELGAEPDPNVFNMAHMGLRLAQRSNGVSSLHGIVSREMFAGLWPGFD HAEVPIGSVTNGVHAPTWVSRSITELADRQPGPGLLSGGAEAFTRFDKVSDEAIWATRRELREQLVAEIRRRVRVSWLQR GAAPGELDWVESVFDPDVLTIGFARRVPSYKRLTLMLRDSERLKRLLLHADRPVQMVIAGKAHPADDGGKLLVQQIVQFA DNPAVRHRIVFLPDYDIGMARFLYAGCDVWLNNPLRPLEACGTSGMKAALNGCLNLSIRDGWWDEMFDGQNGWAIPTADG VEDPDRRDDIESAALYDLLENTVTARFYDRATPTSAPPRWTAMVKHTLSTLGPQVLATRMVREYVERYYVPAGVSARQAT EGDLAGARDLAAWKHRVRSAWSGVQVLNVDSAGLGDTPQVGQSLVVRATVDLGGLDPADVEVIASYGRVDETDRIMAPGT LSLTDVGEGEGGHGHRYEGTIPLGRTGPFGYTVRVLPRHRLTASPAELGLVTNP >Mature_854_residues MRALRRFTVRAQLPEQLAALGELVLNLRWSWHPETLDLFESVDPELWRACEGDPVRLLGEVDHDRLVALSADRKFLRRLS DAADDLQEYLTSDLWYQKQAIPGAPSAIAYFSPEFGITEVLPQYSGGLGILAGDHLKTASDLGVPIIGVGLLYRAGYFVQ SLSRDGWQQERYPGIDPHGLPLTQLTDDEGAPVKVAVGLPEGRTLHAQIWKAQVGRVPLLLLDSDVEDNQSAERGVTDRL YGGGTDHRLLQEMLLGIGGVRALRAYAAVTGSPAPEVYHTNEGHAGFLGLERIRELTETGLSFDEALEAARAGTLFTTHT PVPAGIDRFPKDLVARHFGGDNSWPGVPVDRVLELGAEPDPNVFNMAHMGLRLAQRSNGVSSLHGIVSREMFAGLWPGFD HAEVPIGSVTNGVHAPTWVSRSITELADRQPGPGLLSGGAEAFTRFDKVSDEAIWATRRELREQLVAEIRRRVRVSWLQR GAAPGELDWVESVFDPDVLTIGFARRVPSYKRLTLMLRDSERLKRLLLHADRPVQMVIAGKAHPADDGGKLLVQQIVQFA DNPAVRHRIVFLPDYDIGMARFLYAGCDVWLNNPLRPLEACGTSGMKAALNGCLNLSIRDGWWDEMFDGQNGWAIPTADG VEDPDRRDDIESAALYDLLENTVTARFYDRATPTSAPPRWTAMVKHTLSTLGPQVLATRMVREYVERYYVPAGVSARQAT EGDLAGARDLAAWKHRVRSAWSGVQVLNVDSAGLGDTPQVGQSLVVRATVDLGGLDPADVEVIASYGRVDETDRIMAPGT LSLTDVGEGEGGHGHRYEGTIPLGRTGPFGYTVRVLPRHRLTASPAELGLVTNP
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93538; Mature: 93538
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALRRFTVRAQLPEQLAALGELVLNLRWSWHPETLDLFESVDPELWRACEGDPVRLLGE CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHCCCCCEEEEEC VDHDRLVALSADRKFLRRLSDAADDLQEYLTSDLWYQKQAIPGAPSAIAYFSPEFGITEV CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHH LPQYSGGLGILAGDHLKTASDLGVPIIGVGLLYRAGYFVQSLSRDGWQQERYPGIDPHGL HHHHCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCC PLTQLTDDEGAPVKVAVGLPEGRTLHAQIWKAQVGRVPLLLLDSDVEDNQSAERGVTDRL CCCEECCCCCCCEEEEEECCCCCEEHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCHHH YGGGTDHRLLQEMLLGIGGVRALRAYAAVTGSPAPEVYHTNEGHAGFLGLERIRELTETG CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHC LSFDEALEAARAGTLFTTHTPVPAGIDRFPKDLVARHFGGDNSWPGVPVDRVLELGAEPD CCHHHHHHHHHCCCEEEECCCCCCCHHHCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC PNVFNMAHMGLRLAQRSNGVSSLHGIVSREMFAGLWPGFDHAEVPIGSVTNGVHAPTWVS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH RSITELADRQPGPGLLSGGAEAFTRFDKVSDEAIWATRRELREQLVAEIRRRVRVSWLQR HHHHHHHCCCCCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAAPGELDWVESVFDPDVLTIGFARRVPSYKRLTLMLRDSERLKRLLLHADRPVQMVIAG CCCCCCHHHHHHHCCCCEEEEHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEEEEEEC KAHPADDGGKLLVQQIVQFADNPAVRHRIVFLPDYDIGMARFLYAGCDVWLNNPLRPLEA CCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCHHHCCCCCCHHHH CGTSGMKAALNGCLNLSIRDGWWDEMFDGQNGWAIPTADGVEDPDRRDDIESAALYDLLE CCCCCHHHHHHHHEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NTVTARFYDRATPTSAPPRWTAMVKHTLSTLGPQVLATRMVREYVERYYVPAGVSARQAT HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCC EGDLAGARDLAAWKHRVRSAWSGVQVLNVDSAGLGDTPQVGQSLVVRATVDLGGLDPADV CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCEEEEEEEECCCCCCCHHH EVIASYGRVDETDRIMAPGTLSLTDVGEGEGGHGHRYEGTIPLGRTGPFGYTVRVLPRHR HHHHHCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC LTASPAELGLVTNP CCCCHHHCCCCCCC >Mature Secondary Structure MRALRRFTVRAQLPEQLAALGELVLNLRWSWHPETLDLFESVDPELWRACEGDPVRLLGE CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHCCCCCEEEEEC VDHDRLVALSADRKFLRRLSDAADDLQEYLTSDLWYQKQAIPGAPSAIAYFSPEFGITEV CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHH LPQYSGGLGILAGDHLKTASDLGVPIIGVGLLYRAGYFVQSLSRDGWQQERYPGIDPHGL HHHHCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCC PLTQLTDDEGAPVKVAVGLPEGRTLHAQIWKAQVGRVPLLLLDSDVEDNQSAERGVTDRL CCCEECCCCCCCEEEEEECCCCCEEHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCHHH YGGGTDHRLLQEMLLGIGGVRALRAYAAVTGSPAPEVYHTNEGHAGFLGLERIRELTETG CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHC LSFDEALEAARAGTLFTTHTPVPAGIDRFPKDLVARHFGGDNSWPGVPVDRVLELGAEPD CCHHHHHHHHHCCCEEEECCCCCCCHHHCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC PNVFNMAHMGLRLAQRSNGVSSLHGIVSREMFAGLWPGFDHAEVPIGSVTNGVHAPTWVS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH RSITELADRQPGPGLLSGGAEAFTRFDKVSDEAIWATRRELREQLVAEIRRRVRVSWLQR HHHHHHHCCCCCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAAPGELDWVESVFDPDVLTIGFARRVPSYKRLTLMLRDSERLKRLLLHADRPVQMVIAG CCCCCCHHHHHHHCCCCEEEEHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEEEEEEC KAHPADDGGKLLVQQIVQFADNPAVRHRIVFLPDYDIGMARFLYAGCDVWLNNPLRPLEA CCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCHHHCCCCCCHHHH CGTSGMKAALNGCLNLSIRDGWWDEMFDGQNGWAIPTADGVEDPDRRDDIESAALYDLLE CCCCCHHHHHHHHEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NTVTARFYDRATPTSAPPRWTAMVKHTLSTLGPQVLATRMVREYVERYYVPAGVSARQAT HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCC EGDLAGARDLAAWKHRVRSAWSGVQVLNVDSAGLGDTPQVGQSLVVRATVDLGGLDPADV CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCEEEEEEEECCCCCCCHHH EVIASYGRVDETDRIMAPGTLSLTDVGEGEGGHGHRYEGTIPLGRTGPFGYTVRVLPRHR HHHHHCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC LTASPAELGLVTNP CCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]