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The map label for this gene is 158312890

Identifier: 158312890

GI number: 158312890

Start: 1215785

End: 1216447

Strand: Direct

Name: 158312890

Synonym: Franean1_1036

Alternate gene names: NA

Gene position: 1215785-1216447 (Clockwise)

Preceding gene: 158312889

Following gene: 158312891

Centisome position: 13.54

GC content: 69.53

Gene sequence:

>663_bases
ATGCGGCTCGTTATCGCTCGGTGCAGTGTCGACTACATCGGCCGGCTCAAGGCGCACCTGCCCAGCGCCGTCCGGTTGCT
CCTGGTGAAGGCCGACGGCTCTGTCTCCATCCACGCCGACGGACGTGCCTACAAGCCGCTGAACTGGATGAGCCCGCCCT
GCGTCATCGCCGAGGAGGAGGGCGTCTGGCGGGTCACCAACAAGGCCGAGGAACAGCTCGTCATCTCGATCGAGCAGATC
CTGCACGACTCCACGCACGAGCTCGGTGTCGACCCCGGCCTGCGCAAGGACGGCGTGGAGGCGCACCTGCAGGTGCTGCT
GGCCGACCGGCCGGACGCCGTCCGCGAGGGCCTGACGCTGGTCCGCCGGGAGTACGAGACCGGCATCGGCCCGGTCGACC
TGCTCTGCCGCGACGCCGACGGCTCCACCGTGGCCGTGGAGATCAAGCGCAAGGGTGAGATCGACGGGGTGGAGCAGCTC
ACCCGCTACCTCTCCCGCCTGGACGATGATCCGGCCCTTCCGCATCCGGTGCGGGGCATTCTGTGCGCCCAGTCGATCAC
GCCGCAGGCACGCCTGCTGGCCGCCGACCGCGGCATCGCCTGCTCGGTGGTCGACTACGACGCCCTGCGCGGCCTCGAGC
CTTCCATCCCCACCCTGTTCTGA

Upstream 100 bases:

>100_bases
CACCCGCTACGCGGGCCGCCGCCGGCTGCTCGACGACCTCGTCCTGCGGAACGCGGGTACCCGGTCCAGGTGAGGCGACC
GGGCACGGTACGGTCGCGAC

Downstream 100 bases:

>100_bases
CCCGGTTCCGTCCCTCCCGGACGATGCGTGGCCGCTGGGTGAGTTCTGCCTGCCACTGAGCCGCCACGCCTTTTTGGCTG
TCGCCGTCCGTGGTCCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRLVIARCSVDYIGRLKAHLPSAVRLLLVKADGSVSIHADGRAYKPLNWMSPPCVIAEEEGVWRVTNKAEEQLVISIEQI
LHDSTHELGVDPGLRKDGVEAHLQVLLADRPDAVREGLTLVRREYETGIGPVDLLCRDADGSTVAVEIKRKGEIDGVEQL
TRYLSRLDDDPALPHPVRGILCAQSITPQARLLAADRGIACSVVDYDALRGLEPSIPTLF

Sequences:

>Translated_220_residues
MRLVIARCSVDYIGRLKAHLPSAVRLLLVKADGSVSIHADGRAYKPLNWMSPPCVIAEEEGVWRVTNKAEEQLVISIEQI
LHDSTHELGVDPGLRKDGVEAHLQVLLADRPDAVREGLTLVRREYETGIGPVDLLCRDADGSTVAVEIKRKGEIDGVEQL
TRYLSRLDDDPALPHPVRGILCAQSITPQARLLAADRGIACSVVDYDALRGLEPSIPTLF
>Mature_220_residues
MRLVIARCSVDYIGRLKAHLPSAVRLLLVKADGSVSIHADGRAYKPLNWMSPPCVIAEEEGVWRVTNKAEEQLVISIEQI
LHDSTHELGVDPGLRKDGVEAHLQVLLADRPDAVREGLTLVRREYETGIGPVDLLCRDADGSTVAVEIKRKGEIDGVEQL
TRYLSRLDDDPALPHPVRGILCAQSITPQARLLAADRGIACSVVDYDALRGLEPSIPTLF

Specific function: Unknown

COG id: COG1637

COG function: function code L; Predicted nuclease of the RecB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0286 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1036_FRASN (A8L3X7)

Other databases:

- EMBL:   CP000820
- RefSeq:   YP_001505398.1
- GeneID:   5669450
- GenomeReviews:   CP000820_GR
- KEGG:   fre:Franean1_1036
- HOGENOM:   HBG322466
- OMA:   VDYVGRL
- ProtClustDB:   PRK03298
- BioCyc:   FSP1855:FRANEAN1_1036-MONOMER
- HAMAP:   MF_00722
- InterPro:   IPR002793

Pfam domain/function: PF01939 DUF91

EC number: NA

Molecular weight: Translated: 24110; Mature: 24110

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVIARCSVDYIGRLKAHLPSAVRLLLVKADGSVSIHADGRAYKPLNWMSPPCVIAEEE
CEEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCEECCCCCCCCCEEEECCC
GVWRVTNKAEEQLVISIEQILHDSTHELGVDPGLRKDGVEAHLQVLLADRPDAVREGLTL
CEEEECCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHH
VRREYETGIGPVDLLCRDADGSTVAVEIKRKGEIDGVEQLTRYLSRLDDDPALPHPVRGI
HHHHHHCCCCCHHEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
LCAQSITPQARLLAADRGIACSVVDYDALRGLEPSIPTLF
HHHCCCCCHHHEEECCCCCEEEEECHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRLVIARCSVDYIGRLKAHLPSAVRLLLVKADGSVSIHADGRAYKPLNWMSPPCVIAEEE
CEEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCEECCCCCCCCCEEEECCC
GVWRVTNKAEEQLVISIEQILHDSTHELGVDPGLRKDGVEAHLQVLLADRPDAVREGLTL
CEEEECCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHH
VRREYETGIGPVDLLCRDADGSTVAVEIKRKGEIDGVEQLTRYLSRLDDDPALPHPVRGI
HHHHHHCCCCCHHEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
LCAQSITPQARLLAADRGIACSVVDYDALRGLEPSIPTLF
HHHCCCCCHHHEEECCCCCEEEEECHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA