| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is thrB [H]
Identifier: 158312861
GI number: 158312861
Start: 1188091
End: 1189044
Strand: Direct
Name: thrB [H]
Synonym: Franean1_1007
Alternate gene names: 158312861
Gene position: 1188091-1189044 (Clockwise)
Preceding gene: 158312860
Following gene: 158312862
Centisome position: 13.23
GC content: 75.89
Gene sequence:
>954_bases GTGAGCACCACCGGGCCGGGTGGAGGCCGTCCGCCGGGCGCGGTCCGCCTGCGGGTCCCGGCCACGAGCGCCAACCTGGG TCCGGGCTTCGACGCGCTGGGCCTGGCACTCGGGCTGTACGACGAGGTGTCCGTGCGGCTGACGCCGTCCGGGCTCTCCA TCGACGCGGTCGGCCCGGACGCTGTCCCCGCGGACGAGGCGCATCTGGTGGTCCGGGCGATCCGCGCCACCTTCGACGAG CTGGAGTGGGCGCAACCCGGGCTCGCGCTGCGCTGCGTGAACCGGATCCCGCACGGGCGGGGTCTCGGTTCGTCCGCCGC AGCGATTGTGGCCGGAGTCACAGCCGCCGACGCCCTCGCCGGCGGGCCGCTCGGTCCGGCCGGGCGGCTGCGGGTGGCCA ACGCGATCGAAGGGCATCCGGACAACGTCGCGGCGGCCCTGCTCGGTGGCCTCACCGTCGCCTGGTACGAGGGCGATGTG CCGCGGTCCCTCCGGGTGGCACCGCTCGGCGAGCTACGGCCCGTGGTGTTCGTCCCATCGCGACGCCAGTCGACCGAGCA GGCCCGGGGCGCTCTCCCGAAGCAGGTCCCGCATGCCGACGCCGCGGTGAACATCGGCCGCGCGGCGCTGCTCGCGCTCG CGCTGTCCGGCGCGGAACCGGCGGCCGGCGCTGGCGAGGAACGCTCGCGGCTGCTGCTGACCGCGACCGAGGACCGGATG CACCAGCCGTACCGCCTTCCCGCCATGCCCGCCTCCGCGGATCTGGTCGGACGGCTGCGCGCCGCCGGCATACCGGCCGC GCTGTCGGGTTCCGGGCCGTCCGTGGTGGCGCTCGGGGTCGGTGGCGGACAGGCCGCGGCGGCGATCGGCGTTGCCGCCC CGGGCTTCTCGGTCGTCCCGCTGGCTGTCGACACCGAGGGTGTTCGAGTCGAGGCGGTCGACTCCTCGGAGTGA
Upstream 100 bases:
>100_bases CGCCGGCAGCGCCTCGGGAAGCGGTACGGCCAGCGCGTCGGCGAATGCCTCCGTCAGCACACGGGTGAGCACGATCGTCA GTGCGTCGGCGAGCGTGACG
Downstream 100 bases:
>100_bases TTATGGTACTCCGCTGCGTTCCTGGATGCTGGCTCAGGGGTCGCGCGGACCCCCGCGGAGGGCTCCAAGCTGTCATCAGG GAGTCCCTCGTGGTGTCATC
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSTTGPGGGRPPGAVRLRVPATSANLGPGFDALGLALGLYDEVSVRLTPSGLSIDAVGPDAVPADEAHLVVRAIRATFDE LEWAQPGLALRCVNRIPHGRGLGSSAAAIVAGVTAADALAGGPLGPAGRLRVANAIEGHPDNVAAALLGGLTVAWYEGDV PRSLRVAPLGELRPVVFVPSRRQSTEQARGALPKQVPHADAAVNIGRAALLALALSGAEPAAGAGEERSRLLLTATEDRM HQPYRLPAMPASADLVGRLRAAGIPAALSGSGPSVVALGVGGGQAAAAIGVAAPGFSVVPLAVDTEGVRVEAVDSSE
Sequences:
>Translated_317_residues MSTTGPGGGRPPGAVRLRVPATSANLGPGFDALGLALGLYDEVSVRLTPSGLSIDAVGPDAVPADEAHLVVRAIRATFDE LEWAQPGLALRCVNRIPHGRGLGSSAAAIVAGVTAADALAGGPLGPAGRLRVANAIEGHPDNVAAALLGGLTVAWYEGDV PRSLRVAPLGELRPVVFVPSRRQSTEQARGALPKQVPHADAAVNIGRAALLALALSGAEPAAGAGEERSRLLLTATEDRM HQPYRLPAMPASADLVGRLRAAGIPAALSGSGPSVVALGVGGGQAAAAIGVAAPGFSVVPLAVDTEGVRVEAVDSSE >Mature_316_residues STTGPGGGRPPGAVRLRVPATSANLGPGFDALGLALGLYDEVSVRLTPSGLSIDAVGPDAVPADEAHLVVRAIRATFDEL EWAQPGLALRCVNRIPHGRGLGSSAAAIVAGVTAADALAGGPLGPAGRLRVANAIEGHPDNVAAALLGGLTVAWYEGDVP RSLRVAPLGELRPVVFVPSRRQSTEQARGALPKQVPHADAAVNIGRAALLALALSGAEPAAGAGEERSRLLLTATEDRMH QPYRLPAMPASADLVGRLRAAGIPAALSGSGPSVVALGVGGGQAAAAIGVAAPGFSVVPLAVDTEGVRVEAVDSSE
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=281, Percent_Identity=29.8932384341637, Blast_Score=85, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6321814, Length=321, Percent_Identity=29.595015576324, Blast_Score=125, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 31644; Mature: 31513
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTGPGGGRPPGAVRLRVPATSANLGPGFDALGLALGLYDEVSVRLTPSGLSIDAVGPD CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCC AVPADEAHLVVRAIRATFDELEWAQPGLALRCVNRIPHGRGLGSSAAAIVAGVTAADALA CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC GGPLGPAGRLRVANAIEGHPDNVAAALLGGLTVAWYEGDVPRSLRVAPLGELRPVVFVPS CCCCCCCCCEEEEHHCCCCCCHHHHHHHCCEEEEEECCCCCCCEEECCCCCCCCEEEECC RRQSTEQARGALPKQVPHADAAVNIGRAALLALALSGAEPAAGAGEERSRLLLTATEDRM CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHC HQPYRLPAMPASADLVGRLRAAGIPAALSGSGPSVVALGVGGGQAAAAIGVAAPGFSVVP CCCEECCCCCCCHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCHHHEEEECCCCCEEEE LAVDTEGVRVEAVDSSE EEECCCCCEEEEECCCC >Mature Secondary Structure STTGPGGGRPPGAVRLRVPATSANLGPGFDALGLALGLYDEVSVRLTPSGLSIDAVGPD CCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCC AVPADEAHLVVRAIRATFDELEWAQPGLALRCVNRIPHGRGLGSSAAAIVAGVTAADALA CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC GGPLGPAGRLRVANAIEGHPDNVAAALLGGLTVAWYEGDVPRSLRVAPLGELRPVVFVPS CCCCCCCCCEEEEHHCCCCCCHHHHHHHCCEEEEEECCCCCCCEEECCCCCCCCEEEECC RRQSTEQARGALPKQVPHADAAVNIGRAALLALALSGAEPAAGAGEERSRLLLTATEDRM CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHC HQPYRLPAMPASADLVGRLRAAGIPAALSGSGPSVVALGVGGGQAAAAIGVAAPGFSVVP CCCEECCCCCCCHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCHHHEEEECCCCCEEEE LAVDTEGVRVEAVDSSE EEECCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]