| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312854
Identifier: 158312854
GI number: 158312854
Start: 1180019
End: 1181437
Strand: Direct
Name: 158312854
Synonym: Franean1_1000
Alternate gene names: NA
Gene position: 1180019-1181437 (Clockwise)
Preceding gene: 158312852
Following gene: 158312855
Centisome position: 13.14
GC content: 69.84
Gene sequence:
>1419_bases ATGCCATTGCGGCATGGTGATCGTTTGGGTGTCGCGCACAGGACAGCGACCAGGCCAGATCGGCCCCAGACCGTTCGTGC CCCCGCGCAAGCGTCCCGGGCTCCCTCGCGCATACTGCGGAGCCCCGAGCCGGGGCTCTCCCCACGCCGCCGGCCCTCTC CTGGAGGCCACGTGAGTACGACAGCCGACCGGACGTCCCACGCGCGCAACGAGCACATGACATTCCGGGCGAACCGGGGT GTAGGGCGGCATGGCTGGCTGCGGCTCACGCCCGCCTACGGAGTCCGGCTCGTACGGGGGCGTATCTCCCACCTGCCCGC CGGCTCGGTCATCACCGACCCGTTCTCCGGAACGGGGACGACCCCGCTCGCCGCGGCCGAGCTCGGCCATCACGGCCAGA GCGCCGATCTCAATCCCTTCCTCGTCTGGTTGGGGCGGGCCAAGGTCCGCCAATACCCGCGGCAGACCCTTGCGGACGCG GCCACCGCGGCCGCCGATGCCGGGGACGCCGCCGCCCGCATGGGCCGTGACACCGAGTTGTGGCAGCCGAACATCTTCCG GATCGAGAAATGGTGGAGCCCCGGGGCGCTGCACGCGCTGCGCGCACTCCGGGCGGCGCTCGACGCATATTCAGGACCGG CGGGTGATCTCCTGCAGATCGCACTGTGTCGGGTACTGATCTCCGTCAGCAACGCGGCCTTCAATCATCAGTCCATGTCG TTCAAGGCCGCCGCCGGCGAGACCCGGCCCGGCTCCTTCGACCCGGACGCGGCCGCGGCCACCATCGCGCTGTTCGGCAC CGAGGCGGCAGCCCTGATCGAATCCGCCCGGGTCGACCTGCCGGGCTCCGCCGCCGTCCACGAGGGCGACTCGCGCTCCG TCGTGCCGGACCTGCGCGAAACCGATCTCGTGCTGACCAGCCCGCCCTACGTGAACCGGATGTCCTACATCCGCGAGCTC CGGCCGTACATGTACTGGCTGCGCTACCTCGACCGCGCCGGCGACGCCGGTGAGCTGGACTGGCGCGCGATCGGTGGCAC CTGGGGGAGCGCCACGTCCAACCTGCGCTCCTGGACGCCGGCCACGCCCACCCCGGTCGACGAGGCGCTGGAGGCCGTCT GCGCGCGGATCGCGGCCGACGGCGACCGGAACGGGCCGCTGCTGGCGACCTATGTGCGGAAATACCACCACGACATGTGG CTGCACTTCCAGACCGTCACACCACTGGTGAAACGCGGCGGGCAGGTTTCCTACATCGTGGGGAACTCGACGTTCTACGG CCACGGTGTCCCTGCTCAGGACTGGTATGCGTTGATGCTGCGCGAGCTCGGCTACGCCGACGTCGAGGTGGAGGTTATTC GCAAGCGGAACTCAAACAAGGCCCTGTTCGAATTCGACGTCCGGGCCCGCCGGCCTTGA
Upstream 100 bases:
>100_bases CTCCGCGACGGCCCTCGTCAGGGTCCGTCGCTTTCTGAAGGGCTTTTGGGAACTACGCACCGGAGGTGGCAAGGCACCAC CGAAATCACCCGATCGGGCT
Downstream 100 bases:
>100_bases TCAGTAGTCCCGGCCCGGGGGGTGCCAGTCCGCGCTCGCCAGCTGCCCCGTGCCTCGTCGCCACTCGTCTAGCATCGAAT CGGCCGGCGGTACCGGTCCG
Product: DNA methyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MPLRHGDRLGVAHRTATRPDRPQTVRAPAQASRAPSRILRSPEPGLSPRRRPSPGGHVSTTADRTSHARNEHMTFRANRG VGRHGWLRLTPAYGVRLVRGRISHLPAGSVITDPFSGTGTTPLAAAELGHHGQSADLNPFLVWLGRAKVRQYPRQTLADA ATAAADAGDAAARMGRDTELWQPNIFRIEKWWSPGALHALRALRAALDAYSGPAGDLLQIALCRVLISVSNAAFNHQSMS FKAAAGETRPGSFDPDAAAATIALFGTEAAALIESARVDLPGSAAVHEGDSRSVVPDLRETDLVLTSPPYVNRMSYIREL RPYMYWLRYLDRAGDAGELDWRAIGGTWGSATSNLRSWTPATPTPVDEALEAVCARIAADGDRNGPLLATYVRKYHHDMW LHFQTVTPLVKRGGQVSYIVGNSTFYGHGVPAQDWYALMLRELGYADVEVEVIRKRNSNKALFEFDVRARRP
Sequences:
>Translated_472_residues MPLRHGDRLGVAHRTATRPDRPQTVRAPAQASRAPSRILRSPEPGLSPRRRPSPGGHVSTTADRTSHARNEHMTFRANRG VGRHGWLRLTPAYGVRLVRGRISHLPAGSVITDPFSGTGTTPLAAAELGHHGQSADLNPFLVWLGRAKVRQYPRQTLADA ATAAADAGDAAARMGRDTELWQPNIFRIEKWWSPGALHALRALRAALDAYSGPAGDLLQIALCRVLISVSNAAFNHQSMS FKAAAGETRPGSFDPDAAAATIALFGTEAAALIESARVDLPGSAAVHEGDSRSVVPDLRETDLVLTSPPYVNRMSYIREL RPYMYWLRYLDRAGDAGELDWRAIGGTWGSATSNLRSWTPATPTPVDEALEAVCARIAADGDRNGPLLATYVRKYHHDMW LHFQTVTPLVKRGGQVSYIVGNSTFYGHGVPAQDWYALMLRELGYADVEVEVIRKRNSNKALFEFDVRARRP >Mature_471_residues PLRHGDRLGVAHRTATRPDRPQTVRAPAQASRAPSRILRSPEPGLSPRRRPSPGGHVSTTADRTSHARNEHMTFRANRGV GRHGWLRLTPAYGVRLVRGRISHLPAGSVITDPFSGTGTTPLAAAELGHHGQSADLNPFLVWLGRAKVRQYPRQTLADAA TAAADAGDAAARMGRDTELWQPNIFRIEKWWSPGALHALRALRAALDAYSGPAGDLLQIALCRVLISVSNAAFNHQSMSF KAAAGETRPGSFDPDAAAATIALFGTEAAALIESARVDLPGSAAVHEGDSRSVVPDLRETDLVLTSPPYVNRMSYIRELR PYMYWLRYLDRAGDAGELDWRAIGGTWGSATSNLRSWTPATPTPVDEALEAVCARIAADGDRNGPLLATYVRKYHHDMWL HFQTVTPLVKRGGQVSYIVGNSTFYGHGVPAQDWYALMLRELGYADVEVEVIRKRNSNKALFEFDVRARRP
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51631; Mature: 51500
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRHGDRLGVAHRTATRPDRPQTVRAPAQASRAPSRILRSPEPGLSPRRRPSPGGHVST CCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCEEC TADRTSHARNEHMTFRANRGVGRHGWLRLTPAYGVRLVRGRISHLPAGSVITDPFSGTGT CCHHHHHCCCCCEEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEECCCCCCCC TPLAAAELGHHGQSADLNPFLVWLGRAKVRQYPRQTLADAATAAADAGDAAARMGRDTEL CCHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC WQPNIFRIEKWWSPGALHALRALRAALDAYSGPAGDLLQIALCRVLISVSNAAFNHQSMS CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE FKAAAGETRPGSFDPDAAAATIALFGTEAAALIESARVDLPGSAAVHEGDSRSVVPDLRE EEECCCCCCCCCCCCCHHHEEEEEECCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCC TDLVLTSPPYVNRMSYIRELRPYMYWLRYLDRAGDAGELDWRAIGGTWGSATSNLRSWTP CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCC ATPTPVDEALEAVCARIAADGDRNGPLLATYVRKYHHDMWLHFQTVTPLVKRGGQVSYIV CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEHHHHHHHHCCCEEEEEE GNSTFYGHGVPAQDWYALMLRELGYADVEVEVIRKRNSNKALFEFDVRARRP ECCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCC >Mature Secondary Structure PLRHGDRLGVAHRTATRPDRPQTVRAPAQASRAPSRILRSPEPGLSPRRRPSPGGHVST CCCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCEEC TADRTSHARNEHMTFRANRGVGRHGWLRLTPAYGVRLVRGRISHLPAGSVITDPFSGTGT CCHHHHHCCCCCEEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEECCCCCCCC TPLAAAELGHHGQSADLNPFLVWLGRAKVRQYPRQTLADAATAAADAGDAAARMGRDTEL CCHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC WQPNIFRIEKWWSPGALHALRALRAALDAYSGPAGDLLQIALCRVLISVSNAAFNHQSMS CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE FKAAAGETRPGSFDPDAAAATIALFGTEAAALIESARVDLPGSAAVHEGDSRSVVPDLRE EEECCCCCCCCCCCCCHHHEEEEEECCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCC TDLVLTSPPYVNRMSYIRELRPYMYWLRYLDRAGDAGELDWRAIGGTWGSATSNLRSWTP CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCC ATPTPVDEALEAVCARIAADGDRNGPLLATYVRKYHHDMWLHFQTVTPLVKRGGQVSYIV CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEHHHHHHHHCCCEEEEEE GNSTFYGHGVPAQDWYALMLRELGYADVEVEVIRKRNSNKALFEFDVRARRP ECCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA