Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312855

Identifier: 158312855

GI number: 158312855

Start: 1181663

End: 1182466

Strand: Direct

Name: 158312855

Synonym: Franean1_1001

Alternate gene names: NA

Gene position: 1181663-1182466 (Clockwise)

Preceding gene: 158312854

Following gene: 158312856

Centisome position: 13.16

GC content: 69.03

Gene sequence:

>804_bases
GTGACGACGACAGCGACAACCAGCTCGACCGGAAGAAATAGTGGGAAGAAGAATCGGAACACGACCGGAGAAGCGACGCC
GGACTCGTCCGTCGATACGACCACAAGCACGGCGGTGGAAACGGGCCGGGGCAGGCGGGTGAATTCGGGGCAGCGGACGC
CCGCGGCGCGGCTCGCCTTCGGCATCACCGAGGTCACCGCGCCCACCGTGCTCGTCACCGGGCTGCTGGCGGTGGTCGCC
CAGCATGACGCGCCGGACCTCGGCCACGGCGCGCTCTGGGGTGTCATCGCCGTCCTGTTCGGAACGGCCGTCCCGATGAG
TTTCGTTTTCTACGGCGTCCGCCGCCGCCGCTGGTCCGACCACCATGTGCCGGAGCGCAGCAAGCGGATGCAGCCGATGC
TGTTCGGCTGCGCGTCGGTCGCCGTCGGCTATGTGCTGCTCCGCGTGACGGATGCTCCGAAGGACATCGCCACCGTGTAC
GCCGCGATGATCACCGAAGCGCTCATCCTCACCGCCATCACACGGTTCTGGAAAATCAGCGGCCATGTCGCGGCCGCGGC
GAGCTGTGCCACCGTCCTCACGTTCGTGTACGGGCCGGCGCTCGCCCTCACCTGGGCGGCGGTGCCCGTCATCGCCTGGG
CGCGCGTCCAGACCCGGAAGGCACGGCTGGCAGAGGCCCACGCGGAGGGCTCCGCGGACGACCACGACGAGCTGGACGGC
CACACCCCCGCACAGACCGTAGCCGCCGCGCTCGTAGCAGCAGCGATAGTCACCACCGCCTACGTGACAATCGGAGGCCT
CTGA

Upstream 100 bases:

>100_bases
GTCCATCCGTGTCTGGCCGTTCTTGCCCCGGCGCCTGGCCGCCGGCGATTTTGCCGCAATCCGTCCCGCGTCGAAAAGCA
CCGACTCAGACAGGTATCCC

Downstream 100 bases:

>100_bases
CGCGACCCGGATCGCGGCGAGCCGGGTGGGGGCCGCTTCGAAGCGTGTTGCGTGAGCGGCGCGTGGAGTGGCTCAGACAA
CTCGCTTCGAGGGCGCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MTTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAFGITEVTAPTVLVTGLLAVVA
QHDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSDHHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVY
AAMITEALILTAITRFWKISGHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDG
HTPAQTVAAALVAAAIVTTAYVTIGGL

Sequences:

>Translated_267_residues
MTTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAFGITEVTAPTVLVTGLLAVVA
QHDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSDHHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVY
AAMITEALILTAITRFWKISGHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDG
HTPAQTVAAALVAAAIVTTAYVTIGGL
>Mature_266_residues
TTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAFGITEVTAPTVLVTGLLAVVAQ
HDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSDHHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVYA
AMITEALILTAITRFWKISGHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDGH
TPAQTVAAALVAAAIVTTAYVTIGGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28009; Mature: 27878

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH
GITEVTAPTVLVTGLLAVVAQHDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVYAAMITEALILTAITRFWKIS
CCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC
HTPAQTVAAALVAAAIVTTAYVTIGGL
CCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTTATTSSTGRNSGKKNRNTTGEATPDSSVDTTTSTAVETGRGRRVNSGQRTPAARLAF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH
GITEVTAPTVLVTGLLAVVAQHDAPDLGHGALWGVIAVLFGTAVPMSFVFYGVRRRRWSD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HHVPERSKRMQPMLFGCASVAVGYVLLRVTDAPKDIATVYAAMITEALILTAITRFWKIS
CCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHVAAAASCATVLTFVYGPALALTWAAVPVIAWARVQTRKARLAEAHAEGSADDHDELDG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCC
HTPAQTVAAALVAAAIVTTAYVTIGGL
CCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA