| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312841
Identifier: 158312841
GI number: 158312841
Start: 1155756
End: 1157195
Strand: Direct
Name: 158312841
Synonym: Franean1_0987
Alternate gene names: NA
Gene position: 1155756-1157195 (Clockwise)
Preceding gene: 158312839
Following gene: 158312844
Centisome position: 12.87
GC content: 72.71
Gene sequence:
>1440_bases GTGGCCCTGCAACCCGGACGAGGAAAGATCGAGGGCCGGCACTATCTGCCCTCCACCCCCGAGACAATCAGCTGGGGTGC CCTCCCGACCGCGCGGACGCGGCCGGTCCTCAGCATCGACCCCGGCACGACCGTCACCATCGACACCGTCAGCCAGGAAG GGATCCTCGAGGACCAGGGGCGGGACCCGGACACGTTCTTCCGCGGTTTCGGCGTGGCGCCGTCCGAGGTGCTCGAGGAC GCGCGGGCGATCGCCGCGTCCGGGATACCGCACCGCTTCGGCCGCGACGGCGCGCACATCGTGACGGGCCCGGTGTACGT CCGGGGCGCCGAACCCGGCGACGTGCTGCGGATCGACGTCATCTCACTGCACCCGCGCGCCCGCTACGGCGTGATCTCCA CCCGGCACGGCGCCGGCCTGCTCGCCGGCGAGTTTCCCGAGACCCCGGCGCCGGACCTCGACGCCGACGCCCGGCGCTGG CAGGCATATCGGACGGCTACGTCCTTCTGCGCGGTCGAACGCCGCCGCGGCCGGCTCTTCGGATCCATGCCGAGCGGCCG CGACACCCGGATCCGCTTTCCGCTCAACCCGTCGCTGGGCATCATGACCGTTGCCGCGGACGTCCCCGACGGCCCGGTCT CCTCCAATTCGGTAGGCCGGCACGGTGGCGCGCTGGACTGCCGTGATCTCGGCCCGGGCTCACATCTCTACCTGCCGATC CAGGCGCCGGGCGCGCTTTTCGCCGTCGGCGACCCCCATTACGCCATCGGCGACGGCATGATCGGCGCGACCGCTCTGGA AGGTCCGCTGCGAGCCACCCTCCGCCTGGTGACCCTGCGGGACGCGGCGGCCCGGGCCGCCCTCGGCGCGCTGCGGGAGC CGTTCATCGAGACCGACGAGCTGTGGATAACGTCGGGATTCGACCCTGATCCACGGGAGGCCCTGCGCCGGGCGGCGCGT GCGGCGGTGATGTTCCTCCAGACGAAGGTCGGGCTGGAACGGGCGGCCGCGCTCGCCTACCTGTCCTCGGCGGCGGACTT CGGGGTCGGCCGGCTGGCGGGCGGCCCGGAATCGGGGTACTGCCGAATCCGGCGCGCGGACTTCAGCGAGCCGATGCCGG TGAAGGCCCGGCTGCCCCGAGCCGGTTTCGCCCGCATCGTCGGCGGCACGGACGGCGACACCGACCGGGACCATGACACC GACCGGGACCATGACACCGACCGCGACGCCGGCCTCGGCGGTGATGGTGACCCTGGGGTCGGCAGCGACCGCGGTGGTGC CGGCCGTGGTCATGGCAGCGACGGTGACCACGGCGCTCACCACGGCCACGGGGATGACCAGGATGTCGGCCGTGACGAGG CTCGCGTCCCTGAGCAGGATCGTGTTCCTGACCGGGACCGTTCCCCTGAGCCGGACCGTTCCCGTGAGCCGGACCGGTAA
Upstream 100 bases:
>100_bases TCCGCTGTCCCGTCCGCCGGTGCGCCCTCCGATCCGGAGCGCCGAGCGACGACCAGGACGATTCCGGCCTACGCCGGTCG CCGGCACGGGTAGAACGCGA
Downstream 100 bases:
>100_bases CCACGAGCGGGACCGCGGGCTGAAGCGGTGCGGTATCCCGGACGCGGCGATCGCCCGCGCGTCCTCGAGCACCTCGGACG GCGCCACGCCGAATCCGCGG
Product: acetamidase/formamidase
Products: NA
Alternate protein names: Formamidase; Acetamidase/Formamidase Family Protein; Acetamidase; Amidase; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Acetamidase/Formamidase Family; Formamidase/Acetamidase; Transcriptional Regulatory Protein
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQGRDPDTFFRGFGVAPSEVLED ARAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDVISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRW QAYRTATSFCAVERRRGRLFGSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPI QAPGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDELWITSGFDPDPREALRRAAR AAVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGYCRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDT DRDHDTDRDAGLGGDGDPGVGSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR
Sequences:
>Translated_479_residues MALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQGRDPDTFFRGFGVAPSEVLED ARAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDVISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRW QAYRTATSFCAVERRRGRLFGSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPI QAPGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDELWITSGFDPDPREALRRAAR AAVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGYCRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDT DRDHDTDRDAGLGGDGDPGVGSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR >Mature_478_residues ALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQGRDPDTFFRGFGVAPSEVLEDA RAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDVISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRWQ AYRTATSFCAVERRRGRLFGSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPIQ APGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDELWITSGFDPDPREALRRAARA AVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGYCRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDTD RDHDTDRDAGLGGDGDPGVGSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51008; Mature: 50877
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQG CCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCC RDPDTFFRGFGVAPSEVLEDARAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDV CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCEEEECCCCCCEEEEEE ISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRWQAYRTATSFCAVERRRGRLF EEECCCCCCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE GSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPI CCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEE QAPGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDE ECCCEEEEECCCCEEECCCCCCHHHHCCHHEEEEEEEEHHHHHHHHHHHHHHCCCCCCCC LWITSGFDPDPREALRRAARAAVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGY EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCE CRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDTDRDHDTDRDAGLGGDGDPGV EEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALQPGRGKIEGRHYLPSTPETISWGALPTARTRPVLSIDPGTTVTIDTVSQEGILEDQG CCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCC RDPDTFFRGFGVAPSEVLEDARAIAASGIPHRFGRDGAHIVTGPVYVRGAEPGDVLRIDV CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCEEEECCCCCCEEEEEE ISLHPRARYGVISTRHGAGLLAGEFPETPAPDLDADARRWQAYRTATSFCAVERRRGRLF EEECCCCCCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE GSMPSGRDTRIRFPLNPSLGIMTVAADVPDGPVSSNSVGRHGGALDCRDLGPGSHLYLPI CCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEE QAPGALFAVGDPHYAIGDGMIGATALEGPLRATLRLVTLRDAAARAALGALREPFIETDE ECCCEEEEECCCCEEECCCCCCHHHHCCHHEEEEEEEEHHHHHHHHHHHHHHCCCCCCCC LWITSGFDPDPREALRRAARAAVMFLQTKVGLERAAALAYLSSAADFGVGRLAGGPESGY EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCE CRIRRADFSEPMPVKARLPRAGFARIVGGTDGDTDRDHDTDRDHDTDRDAGLGGDGDPGV EEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSDRGGAGRGHGSDGDHGAHHGHGDDQDVGRDEARVPEQDRVPDRDRSPEPDRSREPDR CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA