| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312839
Identifier: 158312839
GI number: 158312839
Start: 1151733
End: 1153913
Strand: Direct
Name: 158312839
Synonym: Franean1_0985
Alternate gene names: NA
Gene position: 1151733-1153913 (Clockwise)
Preceding gene: 158312836
Following gene: 158312841
Centisome position: 12.82
GC content: 76.71
Gene sequence:
>2181_bases GTGGAAAGCCGAGTGGTCGATCACGAGGAGTCATCCGCCGGCCGGGTCCGTCCAAGCGGCAAGATCCGCCTCGGGGTGGA CGTCGGCGGTACCTTCACCGACCTGGTCGCCGTCGACCCGGACGGCGCGGTGCGGTTCGCCAAGGTTCCCTCGGTGCCCG CCGACCCGTCCGACGGAGTGCTCGCCGCCCTCACCGCCGCGGGGCTGGACGGACCACTCGTGGGCACGTTCGCCCACGGC ACCACCGTCGCCACGAACGCGCTGCTGGAGCGGGCCGGTGCCCGCACGGCCCTGGTGACCACCCGCGGGTTCCGGGACGT GATCGAGATCGGCCGGCAGAACCGGCCGTCGCTCTACGACCTGACCCTCGACCGGCCGCCCGCCCTCGTCCCGCGCGAGC TGCGCTTCACCGTGGCGGAACGGTGCGGCCCGCACGGGGTGCTCGAGCCGCTGCGGGCCGCCGAGGTGGACCGGGTCGTC GAGGAGGTCGCGGCCGTCCCCGGCCTCGACGCGGTCGCCGTGTGCCTGCTGTTCTCCTTCGCCCACCCCGACCACGAACG CACCGTCGCGGCCGCCCTGCGCGCCCGGCTGCCCGGGGTCACGGTGGTGGCCTCCAGCGAGGTCCTGCCGGTCTTCCGCG AGTACGAACGGTTCACCACGGCCGTCGCCGACGCCTACCTGACCCCGCGGCTGTCGTCCTATCTGCGGGCGCTCGAGCGG CGCTGCGCCGCCCGGGACGTCACCGTCCCGATGATCATGCAGTCCTCGGGCGGGGTCACCGAGCTGGCAGAGGCGGCCGG CCACGCCGCCCGCTGCGTGCTCTCCGGGCCGGCCGGGGGAGTGGTCGGCGCCGCGTACGTGGCCGGCCTGTCCGGCGTGC GCGACCTGCTGACCTTCGACATGGGCGGCACCTCCACCGACGTGGCGCCGGTCCTCGACGGCCGCGCGCTGACCACCTCC GAGTCGGTGCTCGCCGGGGTACCGATCGTGCTGCCCACTGTGGACGTCCACTCGGTCAGCGCCGGCGGCGGGTCGATCGC CTGGGTCGACGCCGGCGGCGCGCTGCGCGTCGGCCCGCGCTCCGCCGGCGCGGACCCGGGACCGGCCTGCTACGGCCGCG GCGGCACGCGGCCCACGGTGACCGACGCCGACCTCTGCCTCGGCTACCTCGCCGACGGCGCCGGGCTCGGCGGCGAGGTC ACCCTCTCGCGGACGGCGGCCGAGGCCGCGCTGGGCGCGCTGGGCGCCCCCCTCGGGCTCTCACCGGTCGAGGCCGCCGC CGGGGTGGTGGCGGTCGCGGACGCCGAGATGACCCGTGCCCTGCGCGTCGTCTCCGTTGAGCGCGGGCTCGACCCGCGCG AGCTCGTGCTGGTCGCCTTCGGTGGAGCCGGCGGGACGCATGCCTGCGCGCTCGCCGAGGAGCTCGGGATGACCCGGGTC CTCGTCCCGCTCGCGGCCGGCGTCCTCTCCGCACTGGGCCTGGCGATCGGCGACGTCCGGCGCGACTACGCCCGCCCGCT GATCGGCCGTCTGGGCGAGGTCGACCTGACGGCCGCGTTCGCCGGCCTCGTCGCGAGCGCCGGCCTCGTCGCGAGCGCCG GCCTCGCTGCAAGCGCCGGCCTGGCCGGGGGCCACGATTCCGCGGGCGCGGTCGTGCTCCAACACCGGCTGGACTGCCGC TACGTGGGGCAGTCCCACGAGCTGACCATCGACGTGGCGGAGCCCGGGGGCGGCGGCAGCGAGGCCGCGGGCGGCAGCGG TGCGGCAAACAGCAGCGGTGCGGCGGGCGGCTGGGCGGCGGGGGCCGGCGGGCTCGTTGACGCCGTCCGTGCTGCCTTCG AGGCCGAGCACCTGCGCCGCTACGGGCACATCGCGGCGGGCCGCGAGATCGAGACGGTGGCCGTCCGCCTGGTGGTGACC GTGCCCGGGCCCAGACCGAGACCGGTCGCCCCGCGCCCCGATCCCACGGCGCGCCGCGGCCGGCGCCGGGCCTGGACGGA CAGCGCGTGGCACGAGATCGACGTGATCCCCCGGGCAGCCCTCGGACCGGGAGACACGGTGACCGGCCCGGCCGTCGTGG AGTTCGCCGAGGCGACCTGCCTGCTCCGCCGTGGTTGGACCGGCGTCGTGGACGACATCGGGACGATCGTCCTCACCCAC ACGACGCCGTCCGCCGTCTGA
Upstream 100 bases:
>100_bases TCACCGGCCGATCGGGAGGCCCGGCGCCGTCGCTCTGGGTGACTACCTGCCGGAGGGTGGCGGGCGCGGGAGTGAGCACG TCAGGGGAGCCGTCAGAGGG
Downstream 100 bases:
>100_bases ACCCGTCTGGCCGTCTGGCCATCCGCCGTCTGACGGAGTCGGGTGGGCGGCGCTGGATTGTTTGACGGGTATCCAGCGAA CGGGAACAGGGCCGGGGTGT
Product: 5-oxoprolinase
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MESRVVDHEESSAGRVRPSGKIRLGVDVGGTFTDLVAVDPDGAVRFAKVPSVPADPSDGVLAALTAAGLDGPLVGTFAHG TTVATNALLERAGARTALVTTRGFRDVIEIGRQNRPSLYDLTLDRPPALVPRELRFTVAERCGPHGVLEPLRAAEVDRVV EEVAAVPGLDAVAVCLLFSFAHPDHERTVAAALRARLPGVTVVASSEVLPVFREYERFTTAVADAYLTPRLSSYLRALER RCAARDVTVPMIMQSSGGVTELAEAAGHAARCVLSGPAGGVVGAAYVAGLSGVRDLLTFDMGGTSTDVAPVLDGRALTTS ESVLAGVPIVLPTVDVHSVSAGGGSIAWVDAGGALRVGPRSAGADPGPACYGRGGTRPTVTDADLCLGYLADGAGLGGEV TLSRTAAEAALGALGAPLGLSPVEAAAGVVAVADAEMTRALRVVSVERGLDPRELVLVAFGGAGGTHACALAEELGMTRV LVPLAAGVLSALGLAIGDVRRDYARPLIGRLGEVDLTAAFAGLVASAGLVASAGLAASAGLAGGHDSAGAVVLQHRLDCR YVGQSHELTIDVAEPGGGGSEAAGGSGAANSSGAAGGWAAGAGGLVDAVRAAFEAEHLRRYGHIAAGREIETVAVRLVVT VPGPRPRPVAPRPDPTARRGRRRAWTDSAWHEIDVIPRAALGPGDTVTGPAVVEFAEATCLLRRGWTGVVDDIGTIVLTH TTPSAV
Sequences:
>Translated_726_residues MESRVVDHEESSAGRVRPSGKIRLGVDVGGTFTDLVAVDPDGAVRFAKVPSVPADPSDGVLAALTAAGLDGPLVGTFAHG TTVATNALLERAGARTALVTTRGFRDVIEIGRQNRPSLYDLTLDRPPALVPRELRFTVAERCGPHGVLEPLRAAEVDRVV EEVAAVPGLDAVAVCLLFSFAHPDHERTVAAALRARLPGVTVVASSEVLPVFREYERFTTAVADAYLTPRLSSYLRALER RCAARDVTVPMIMQSSGGVTELAEAAGHAARCVLSGPAGGVVGAAYVAGLSGVRDLLTFDMGGTSTDVAPVLDGRALTTS ESVLAGVPIVLPTVDVHSVSAGGGSIAWVDAGGALRVGPRSAGADPGPACYGRGGTRPTVTDADLCLGYLADGAGLGGEV TLSRTAAEAALGALGAPLGLSPVEAAAGVVAVADAEMTRALRVVSVERGLDPRELVLVAFGGAGGTHACALAEELGMTRV LVPLAAGVLSALGLAIGDVRRDYARPLIGRLGEVDLTAAFAGLVASAGLVASAGLAASAGLAGGHDSAGAVVLQHRLDCR YVGQSHELTIDVAEPGGGGSEAAGGSGAANSSGAAGGWAAGAGGLVDAVRAAFEAEHLRRYGHIAAGREIETVAVRLVVT VPGPRPRPVAPRPDPTARRGRRRAWTDSAWHEIDVIPRAALGPGDTVTGPAVVEFAEATCLLRRGWTGVVDDIGTIVLTH TTPSAV >Mature_726_residues MESRVVDHEESSAGRVRPSGKIRLGVDVGGTFTDLVAVDPDGAVRFAKVPSVPADPSDGVLAALTAAGLDGPLVGTFAHG TTVATNALLERAGARTALVTTRGFRDVIEIGRQNRPSLYDLTLDRPPALVPRELRFTVAERCGPHGVLEPLRAAEVDRVV EEVAAVPGLDAVAVCLLFSFAHPDHERTVAAALRARLPGVTVVASSEVLPVFREYERFTTAVADAYLTPRLSSYLRALER RCAARDVTVPMIMQSSGGVTELAEAAGHAARCVLSGPAGGVVGAAYVAGLSGVRDLLTFDMGGTSTDVAPVLDGRALTTS ESVLAGVPIVLPTVDVHSVSAGGGSIAWVDAGGALRVGPRSAGADPGPACYGRGGTRPTVTDADLCLGYLADGAGLGGEV TLSRTAAEAALGALGAPLGLSPVEAAAGVVAVADAEMTRALRVVSVERGLDPRELVLVAFGGAGGTHACALAEELGMTRV LVPLAAGVLSALGLAIGDVRRDYARPLIGRLGEVDLTAAFAGLVASAGLVASAGLAASAGLAGGHDSAGAVVLQHRLDCR YVGQSHELTIDVAEPGGGGSEAAGGSGAANSSGAAGGWAAGAGGLVDAVRAAFEAEHLRRYGHIAAGREIETVAVRLVVT VPGPRPRPVAPRPDPTARRGRRRAWTDSAWHEIDVIPRAALGPGDTVTGPAVVEFAEATCLLRRGWTGVVDDIGTIVLTH TTPSAV
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=517, Percent_Identity=40.4255319148936, Blast_Score=250, Evalue=4e-66, Organism=Caenorhabditis elegans, GI133901900, Length=523, Percent_Identity=32.887189292543, Blast_Score=226, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6322634, Length=609, Percent_Identity=33.4975369458128, Blast_Score=258, Evalue=2e-69, Organism=Drosophila melanogaster, GI45550492, Length=549, Percent_Identity=38.4335154826958, Blast_Score=272, Evalue=6e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.14
Molecular weight: Translated: 73588; Mature: 73588
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESRVVDHEESSAGRVRPSGKIRLGVDVGGTFTDLVAVDPDGAVRFAKVPSVPADPSDGV CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCCH LAALTAAGLDGPLVGTFAHGTTVATNALLERAGARTALVTTRGFRDVIEIGRQNRPSLYD HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCCEEE LTLDRPPALVPRELRFTVAERCGPHGVLEPLRAAEVDRVVEEVAAVPGLDAVAVCLLFSF EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AHPDHERTVAAALRARLPGVTVVASSEVLPVFREYERFTTAVADAYLTPRLSSYLRALER CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCAARDVTVPMIMQSSGGVTELAEAAGHAARCVLSGPAGGVVGAAYVAGLSGVRDLLTFD HHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC MGGTSTDVAPVLDGRALTTSESVLAGVPIVLPTVDVHSVSAGGGSIAWVDAGGALRVGPR CCCCCCCCHHHCCCCEEECCCHHHHCCCEEEECCEEEEECCCCCEEEEEECCCEEEECCC SAGADPGPACYGRGGTRPTVTDADLCLGYLADGAGLGGEVTLSRTAAEAALGALGAPLGL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCC SPVEAAAGVVAVADAEMTRALRVVSVERGLDPRELVLVAFGGAGGTHACALAEELGMTRV CHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHH LVPLAAGVLSALGLAIGDVRRDYARPLIGRLGEVDLTAAFAGLVASAGLVASAGLAASAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCC LAGGHDSAGAVVLQHRLDCRYVGQSHELTIDVAEPGGGGSEAAGGSGAANSSGAAGGWAA CCCCCCCCCCEEEEECCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GAGGLVDAVRAAFEAEHLRRYGHIAAGREIETVAVRLVVTVPGPRPRPVAPRPDPTARRG CCCHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHC RRRAWTDSAWHEIDVIPRAALGPGDTVTGPAVVEFAEATCLLRRGWTGVVDDIGTIVLTH CCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEE TTPSAV CCCCCC >Mature Secondary Structure MESRVVDHEESSAGRVRPSGKIRLGVDVGGTFTDLVAVDPDGAVRFAKVPSVPADPSDGV CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCCH LAALTAAGLDGPLVGTFAHGTTVATNALLERAGARTALVTTRGFRDVIEIGRQNRPSLYD HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCCEEE LTLDRPPALVPRELRFTVAERCGPHGVLEPLRAAEVDRVVEEVAAVPGLDAVAVCLLFSF EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AHPDHERTVAAALRARLPGVTVVASSEVLPVFREYERFTTAVADAYLTPRLSSYLRALER CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCAARDVTVPMIMQSSGGVTELAEAAGHAARCVLSGPAGGVVGAAYVAGLSGVRDLLTFD HHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC MGGTSTDVAPVLDGRALTTSESVLAGVPIVLPTVDVHSVSAGGGSIAWVDAGGALRVGPR CCCCCCCCHHHCCCCEEECCCHHHHCCCEEEECCEEEEECCCCCEEEEEECCCEEEECCC SAGADPGPACYGRGGTRPTVTDADLCLGYLADGAGLGGEVTLSRTAAEAALGALGAPLGL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCC SPVEAAAGVVAVADAEMTRALRVVSVERGLDPRELVLVAFGGAGGTHACALAEELGMTRV CHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHH LVPLAAGVLSALGLAIGDVRRDYARPLIGRLGEVDLTAAFAGLVASAGLVASAGLAASAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCC LAGGHDSAGAVVLQHRLDCRYVGQSHELTIDVAEPGGGGSEAAGGSGAANSSGAAGGWAA CCCCCCCCCCEEEEECCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GAGGLVDAVRAAFEAEHLRRYGHIAAGREIETVAVRLVVTVPGPRPRPVAPRPDPTARRG CCCHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHC RRRAWTDSAWHEIDVIPRAALGPGDTVTGPAVVEFAEATCLLRRGWTGVVDDIGTIVLTH CCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEE TTPSAV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]