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The map label for this gene is yogA [H]

Identifier: 158312836

GI number: 158312836

Start: 1146256

End: 1147230

Strand: Direct

Name: yogA [H]

Synonym: Franean1_0982

Alternate gene names: 158312836

Gene position: 1146256-1147230 (Clockwise)

Preceding gene: 158312834

Following gene: 158312839

Centisome position: 12.76

GC content: 73.03

Gene sequence:

>975_bases
GTGCTTGCCGCCGCCGCCGTCTCCATCAACCCGGACGACCCGCTGGCCGGCCTCGTGGTCGGCGACCAGCCGGAACCGGC
CGTGCCCGAGGGCTGGACCACGGTCACCGTACGGGCCGCCGCGCTCAACCACCACGACCTGTTCAGCCTGCGCGGAGTTG
GGCTGCCGCCCGAGCGCCTGCCCATGATCCTGGGCTGCGACGCGGCCGGGGTCAGCGCGGACGGCGACGAGGTGATCGTC
CACGCCGTCATCGGTGACCCGGCTCGCGGGGGCGGTGACGAGACCCTGGACCCGAAGCGGACCCTGCTCTCCGAGCTGCA
TCCTGGCACGCTCGCGGAGCGGATCGCCGTCCCGCGGGGGAACCTTGTGCCCAAGCCGGCGGCGCTGTCGTGGGAGGATG
CGGCCTGCCTGCCCACGGCCTGGCTCACGGCGTACCGCATGGTGGTCAACCGGGCGGGCCTGCCGGCGGGTGGTGGCGGG
ACGCTGCTCGTCCAGGGAGCCGGTGGCGGAGTGTCCACCGCGGCCCTGATGATCGGCAAGGCGGCCGGTCACACCGTGTT
CGTCACCTCTCGGGACGAGTCCAAGCGTAGGCGGGCGCTCGAGCTCGGGGCCGATCTCGCCGTCGAGTCGGGCGCGCGCC
TGCCGAAGCGCGTGGACGCAGTGATCGAGACGGTCGGGGCCGCGACCTGGTCGCACTCGGTGCGGTCACTGCGCCCGGGT
GGACGGATCGTCTGCTCCGGCGCCACCAGCGGCCCGAACCCGCCGGCCGAGCTCAACCGGATCTTCTTCCTTCAGCTCTC
GGTGATCGGTTCGACGATGGGCACGCGCACCGAGCTCGCCGAACTGGTCGACCTCCTGGCGCGCACGGGCACCCGCCCGC
TCGTCGACGATGTCCGCCCGCTCGCCGACGCTCGTGTCTCCTTCGGACGTCTCGCGGACGGCGAGGTCTTCGGCAAGCTC
GTCCTGACCCCCTAG

Upstream 100 bases:

>100_bases
CGTTCACCGGAACCGGACACGGATCGGACACGGATCGGACCGAGCATGGAGCGGACGGTTCGGTGGCGTTGGTGGGGAGC
GTCATCCTAGGGTTACCCTC

Downstream 100 bases:

>100_bases
CCCCGCGCGCGGCCGGTGCCCCGGGGGACACCCCGGGGGACAGCGGCGACGGGGGTCAGAGGTCTGGGTCGTCGTCGGGG
CGGGCCAGCCAGGTCGCGAG

Product: alcohol dehydrogenase

Products: aldehyde; ketone; NADH; H+

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MLAAAAVSINPDDPLAGLVVGDQPEPAVPEGWTTVTVRAAALNHHDLFSLRGVGLPPERLPMILGCDAAGVSADGDEVIV
HAVIGDPARGGGDETLDPKRTLLSELHPGTLAERIAVPRGNLVPKPAALSWEDAACLPTAWLTAYRMVVNRAGLPAGGGG
TLLVQGAGGGVSTAALMIGKAAGHTVFVTSRDESKRRRALELGADLAVESGARLPKRVDAVIETVGAATWSHSVRSLRPG
GRIVCSGATSGPNPPAELNRIFFLQLSVIGSTMGTRTELAELVDLLARTGTRPLVDDVRPLADARVSFGRLADGEVFGKL
VLTP

Sequences:

>Translated_324_residues
MLAAAAVSINPDDPLAGLVVGDQPEPAVPEGWTTVTVRAAALNHHDLFSLRGVGLPPERLPMILGCDAAGVSADGDEVIV
HAVIGDPARGGGDETLDPKRTLLSELHPGTLAERIAVPRGNLVPKPAALSWEDAACLPTAWLTAYRMVVNRAGLPAGGGG
TLLVQGAGGGVSTAALMIGKAAGHTVFVTSRDESKRRRALELGADLAVESGARLPKRVDAVIETVGAATWSHSVRSLRPG
GRIVCSGATSGPNPPAELNRIFFLQLSVIGSTMGTRTELAELVDLLARTGTRPLVDDVRPLADARVSFGRLADGEVFGKL
VLTP
>Mature_324_residues
MLAAAAVSINPDDPLAGLVVGDQPEPAVPEGWTTVTVRAAALNHHDLFSLRGVGLPPERLPMILGCDAAGVSADGDEVIV
HAVIGDPARGGGDETLDPKRTLLSELHPGTLAERIAVPRGNLVPKPAALSWEDAACLPTAWLTAYRMVVNRAGLPAGGGG
TLLVQGAGGGVSTAALMIGKAAGHTVFVTSRDESKRRRALELGADLAVESGARLPKRVDAVIETVGAATWSHSVRSLRPG
GRIVCSGATSGPNPPAELNRIFFLQLSVIGSTMGTRTELAELVDLLARTGTRPLVDDVRPLADARVSFGRLADGEVFGKL
VLTP

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=331, Percent_Identity=27.190332326284, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI22538444, Length=331, Percent_Identity=27.190332326284, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI18379349, Length=326, Percent_Identity=25.4601226993865, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: 1.1.1.1

Molecular weight: Translated: 33469; Mature: 33469

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAAAVSINPDDPLAGLVVGDQPEPAVPEGWTTVTVRAAALNHHDLFSLRGVGLPPERL
CCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHEECCCCCCHHHC
PMILGCDAAGVSADGDEVIVHAVIGDPARGGGDETLDPKRTLLSELHPGTLAERIAVPRG
CEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCC
NLVPKPAALSWEDAACLPTAWLTAYRMVVNRAGLPAGGGGTLLVQGAGGGVSTAALMIGK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCC
AAGHTVFVTSRDESKRRRALELGADLAVESGARLPKRVDAVIETVGAATWSHSVRSLRPG
CCCCEEEEECCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GRIVCSGATSGPNPPAELNRIFFLQLSVIGSTMGTRTELAELVDLLARTGTRPLVDDVRP
CEEEECCCCCCCCCHHHHCEEEEEEEEEHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
LADARVSFGRLADGEVFGKLVLTP
HHHHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLAAAAVSINPDDPLAGLVVGDQPEPAVPEGWTTVTVRAAALNHHDLFSLRGVGLPPERL
CCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHEECCCCCCHHHC
PMILGCDAAGVSADGDEVIVHAVIGDPARGGGDETLDPKRTLLSELHPGTLAERIAVPRG
CEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCC
NLVPKPAALSWEDAACLPTAWLTAYRMVVNRAGLPAGGGGTLLVQGAGGGVSTAALMIGK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCC
AAGHTVFVTSRDESKRRRALELGADLAVESGARLPKRVDAVIETVGAATWSHSVRSLRPG
CCCCEEEEECCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GRIVCSGATSGPNPPAELNRIFFLQLSVIGSTMGTRTELAELVDLLARTGTRPLVDDVRP
CEEEECCCCCCCCCHHHHCEEEEEEEEEHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
LADARVSFGRLADGEVFGKLVLTP
HHHHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: alcohol; NAD+

Specific reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]