| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ybaZ [C]
Identifier: 158312777
GI number: 158312777
Start: 1074333
End: 1074752
Strand: Direct
Name: ybaZ [C]
Synonym: Franean1_0923
Alternate gene names: 158312777
Gene position: 1074333-1074752 (Clockwise)
Preceding gene: 158312776
Following gene: 158312779
Centisome position: 11.96
GC content: 78.57
Gene sequence:
>420_bases ATGGAGCGGGCGACGGACGGGCCTGGTGGACGTCGGCGGGGGCGGTCGCCGGACACCGTGTCGGCCGGTGCCGGGACGCG GATCCACCTCGGGGGCCGGCCGAGCCCGCACGCGATGGCCGTCCTCGAGGCGGTCACCCGGATCCCGGCGGGCAAAGTCA TGACCTACGGTGACGTCGCCGAGTTCGTCGGCGCCGGCACCGGGCGCACCGTGGGCGCGGTGCTCTCGCGGCACGGCCAC GAGGACGACGTTCCGTGGCACCGGGTGATCCGTGCCTCCGGGGAGCCGAATCCCGTCGCCCCCGCCGAGGCGCTGCGCCG CCTGCGCGCGGACGGCACCCCGCTGCGCCCGGCCGGCGACCGGGTCGACCTCGCGGCGGCCCGCTGGGACGGCGACGTCA CCCGCCCCGGCCAGCGCTGA
Upstream 100 bases:
>100_bases GAAGGATGCGAAAGGGCGAGCGGGTCACCCCGACAGCTGGGTGCTTTGTCCGATAGATGACTGTTTGGTGGTCTGGCGAG GGGACGGGAGGTCGGTGGGC
Downstream 100 bases:
>100_bases TCTCCAGCCTGGGCTGTGCCTCGGCCCGGGCTGAACCCCGTCCGGGGTAGGTACCGGGCGGGTGTGGTCAGCGGGCGGTG AATCCCCCGTCGGCGGAGTA
Product: DNA binding methylated-DNA-(protein)-cysteine S-methyltransferase
Products: NA
Alternate protein names: Methylated-DNA-Protein-Cysteine Methyltransferase
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MERATDGPGGRRRGRSPDTVSAGAGTRIHLGGRPSPHAMAVLEAVTRIPAGKVMTYGDVAEFVGAGTGRTVGAVLSRHGH EDDVPWHRVIRASGEPNPVAPAEALRRLRADGTPLRPAGDRVDLAAARWDGDVTRPGQR
Sequences:
>Translated_139_residues MERATDGPGGRRRGRSPDTVSAGAGTRIHLGGRPSPHAMAVLEAVTRIPAGKVMTYGDVAEFVGAGTGRTVGAVLSRHGH EDDVPWHRVIRASGEPNPVAPAEALRRLRADGTPLRPAGDRVDLAAARWDGDVTRPGQR >Mature_139_residues MERATDGPGGRRRGRSPDTVSAGAGTRIHLGGRPSPHAMAVLEAVTRIPAGKVMTYGDVAEFVGAGTGRTVGAVLSRHGH EDDVPWHRVIRASGEPNPVAPAEALRRLRADGTPLRPAGDRVDLAAARWDGDVTRPGQR
Specific function: Unknown
COG id: COG3695
COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14623; Mature: 14623
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERATDGPGGRRRGRSPDTVSAGAGTRIHLGGRPSPHAMAVLEAVTRIPAGKVMTYGDVA CCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEHHHHH EFVGAGTGRTVGAVLSRHGHEDDVPWHRVIRASGEPNPVAPAEALRRLRADGTPLRPAGD HHHCCCCCHHHHHHHHHCCCCCCCCHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCCCCC RVDLAAARWDGDVTRPGQR CEEEEEECCCCCCCCCCCC >Mature Secondary Structure MERATDGPGGRRRGRSPDTVSAGAGTRIHLGGRPSPHAMAVLEAVTRIPAGKVMTYGDVA CCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEHHHHH EFVGAGTGRTVGAVLSRHGHEDDVPWHRVIRASGEPNPVAPAEALRRLRADGTPLRPAGD HHHCCCCCHHHHHHHHHCCCCCCCCHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCCCCC RVDLAAARWDGDVTRPGQR CEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA