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The map label for this gene is 158312775

Identifier: 158312775

GI number: 158312775

Start: 1071711

End: 1072667

Strand: Direct

Name: 158312775

Synonym: Franean1_0921

Alternate gene names: NA

Gene position: 1071711-1072667 (Clockwise)

Preceding gene: 158312771

Following gene: 158312776

Centisome position: 11.93

GC content: 71.37

Gene sequence:

>957_bases
ATGCGTTCGATTTGGAAGGGTGTGATCTCTTTCGGTCTGGTGTCGATCCCGATCCGGCTCTACCCCGCGGCCCAGGAGCG
TGACGTCTCGTTCCACCAGGTCAGGCGTTCGGACGGCGCTCGGGTCAGGTACCGGCGGGTCGCCGCGACCGACGGCGAGG
AGGTCGCCTACGCCGACATCGCGAAAGGCTACGAGCTCCCCGACGGGGAGATGGTCGTCCTCACCGACGACGACTTCACG
AACCTGCCGCTGACGACGTCCCGCTCGATCGACGTGCTGGGGTTCGTCCCCCTCGAGCAGGTCGATCCGATCTACTTCGC
GAAGAGCTACTACCTCGAGCCGGACCGCACCGGCCTCAAGCCGTACGTCCTGCTGCGCGAGGCGCTCGCCGGCTCGGGGC
GGGTCGCACTGGTCAAGATCGCGCTGCGCCAGCGCGAGCAGCTCGCGACGCTGCGGGTCCGCGACGACGTCTTCGTCCTG
GAAACAATGCTGTGGCCGGACGAGGTCCGCGAGCCCGAGTTCGACGTCCTCGACGAGCAGGTGGACGTCCGGCCGCAGGA
GCTGGCGATGGCGAGCTCACTGATCGACACCCTCGCCGCCGACTTCGACCCCACGAAGTTCCGCGACGGGTACCGCGAGG
CGCTCCAGGCCGTGATCGACGCCAAGATCGCCGGCCGGGACGTCGTCGCACCTCCCTCCGAGCAGCCCGGCGTCGACGCG
GCCGGTGACCTGATGGCGGCGCTGCGAGCAAGCATCGAGGCGGCCCGGACCGGCCGTGACGGCCAGAGCTCCGGCTCCGC
GCGGGCGGCCCCGGCCGAGGCTGACTCCGCCCGGGCCGGGGCTGACTCCGCCCGGGCCGGGGCCCGGAAGGGCCAGCCGA
GCCGGAGCCGGAAGAAGAAGGCGGACACGGCGGCCGACGACGTCGTCAGCTCCCGGCCCACCCGCCGCTCGGCCTGA

Upstream 100 bases:

>100_bases
GATTCCCGTCGACGGGGCCGCCGGTGACGTTTCGTCCGCATGGCTTCCCAGTGGGCTTCTGGTGGGTCACTATTGGGTTG
AGCTGACGTGAGGGGTGAAC

Downstream 100 bases:

>100_bases
CCCCCGCGCGGGTGCCGGACGTCCCGGGCGGGGCGGGGAACACCCGGGCCCGGGGACGCGCTGCACCATGTGGAGCGTCC
GCTGCGGCGGCCCGTCCGGA

Product: Ku family containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRSIWKGVISFGLVSIPIRLYPAAQERDVSFHQVRRSDGARVRYRRVAATDGEEVAYADIAKGYELPDGEMVVLTDDDFT
NLPLTTSRSIDVLGFVPLEQVDPIYFAKSYYLEPDRTGLKPYVLLREALAGSGRVALVKIALRQREQLATLRVRDDVFVL
ETMLWPDEVREPEFDVLDEQVDVRPQELAMASSLIDTLAADFDPTKFRDGYREALQAVIDAKIAGRDVVAPPSEQPGVDA
AGDLMAALRASIEAARTGRDGQSSGSARAAPAEADSARAGADSARAGARKGQPSRSRKKKADTAADDVVSSRPTRRSA

Sequences:

>Translated_318_residues
MRSIWKGVISFGLVSIPIRLYPAAQERDVSFHQVRRSDGARVRYRRVAATDGEEVAYADIAKGYELPDGEMVVLTDDDFT
NLPLTTSRSIDVLGFVPLEQVDPIYFAKSYYLEPDRTGLKPYVLLREALAGSGRVALVKIALRQREQLATLRVRDDVFVL
ETMLWPDEVREPEFDVLDEQVDVRPQELAMASSLIDTLAADFDPTKFRDGYREALQAVIDAKIAGRDVVAPPSEQPGVDA
AGDLMAALRASIEAARTGRDGQSSGSARAAPAEADSARAGADSARAGARKGQPSRSRKKKADTAADDVVSSRPTRRSA
>Mature_318_residues
MRSIWKGVISFGLVSIPIRLYPAAQERDVSFHQVRRSDGARVRYRRVAATDGEEVAYADIAKGYELPDGEMVVLTDDDFT
NLPLTTSRSIDVLGFVPLEQVDPIYFAKSYYLEPDRTGLKPYVLLREALAGSGRVALVKIALRQREQLATLRVRDDVFVL
ETMLWPDEVREPEFDVLDEQVDVRPQELAMASSLIDTLAADFDPTKFRDGYREALQAVIDAKIAGRDVVAPPSEQPGVDA
AGDLMAALRASIEAARTGRDGQSSGSARAAPAEADSARAGADSARAGARKGQPSRSRKKKADTAADDVVSSRPTRRSA

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 34722; Mature: 34722

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIWKGVISFGLVSIPIRLYPAAQERDVSFHQVRRSDGARVRYRRVAATDGEEVAYADI
CHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHHH
AKGYELPDGEMVVLTDDDFTNLPLTTSRSIDVLGFVPLEQVDPIYFAKSYYLEPDRTGLK
HCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHCCCEEEHHHEEECCCCCCCC
PYVLLREALAGSGRVALVKIALRQREQLATLRVRDDVFVLETMLWPDEVREPEFDVLDEQ
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHEECCCHHHHHHHHCHHHHCCCCHHHHCHH
VDVRPQELAMASSLIDTLAADFDPTKFRDGYREALQAVIDAKIAGRDVVAPPSEQPGVDA
HCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
AGDLMAALRASIEAARTGRDGQSSGSARAAPAEADSARAGADSARAGARKGQPSRSRKKK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHH
ADTAADDVVSSRPTRRSA
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRSIWKGVISFGLVSIPIRLYPAAQERDVSFHQVRRSDGARVRYRRVAATDGEEVAYADI
CHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHHH
AKGYELPDGEMVVLTDDDFTNLPLTTSRSIDVLGFVPLEQVDPIYFAKSYYLEPDRTGLK
HCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHCCCEEEHHHEEECCCCCCCC
PYVLLREALAGSGRVALVKIALRQREQLATLRVRDDVFVLETMLWPDEVREPEFDVLDEQ
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHEECCCHHHHHHHHCHHHHCCCCHHHHCHH
VDVRPQELAMASSLIDTLAADFDPTKFRDGYREALQAVIDAKIAGRDVVAPPSEQPGVDA
HCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
AGDLMAALRASIEAARTGRDGQSSGSARAAPAEADSARAGADSARAGARKGQPSRSRKKK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHH
ADTAADDVVSSRPTRRSA
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA