Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158312733

Identifier: 158312733

GI number: 158312733

Start: 1024185

End: 1024352

Strand: Direct

Name: 158312733

Synonym: Franean1_0879

Alternate gene names: NA

Gene position: 1024185-1024352 (Clockwise)

Preceding gene: 158312732

Following gene: 158312734

Centisome position: 11.4

GC content: 69.05

Gene sequence:

>168_bases
ATGGCGGCCATGAAGCCGCGGACGGGTGACGGTCCGCTCGAGGTCACCAAGGAGGGGCGCGGCATTGTCATGCGCGTCCC
GCTCGAAGGGGGCGGCCGACTCGTCGTCGAACTCACAGCCGACGAGGCGAGCGCGCTGGGAGACGCTCTCAAGATCGCGG
TCGGTTAG

Upstream 100 bases:

>100_bases
GACCGTTGTGATTCCCCGCAGGGACGTGTTTCGGTTTGCGGGTCGGTCTCCGGGATAATCGTCGTCAGACGCAGGTCCGA
CGGCAGGAAGAGGTGCACCG

Downstream 100 bases:

>100_bases
GCTCGGTGGTCACCTACCCCCGGCCCGGCGGACGGGTCCGCGGGGCGGAGGCGTCCGCGTGACGACCGCCGCTCCCACCC
AGGACGCCGACCTCATCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MAAMKPRTGDGPLEVTKEGRGIVMRVPLEGGGRLVVELTADEASALGDALKIAVG

Sequences:

>Translated_55_residues
MAAMKPRTGDGPLEVTKEGRGIVMRVPLEGGGRLVVELTADEASALGDALKIAVG
>Mature_54_residues
AAMKPRTGDGPLEVTKEGRGIVMRVPLEGGGRLVVELTADEASALGDALKIAVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5605; Mature: 5473

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAMKPRTGDGPLEVTKEGRGIVMRVPLEGGGRLVVELTADEASALGDALKIAVG
CCCCCCCCCCCCEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
AAMKPRTGDGPLEVTKEGRGIVMRVPLEGGGRLVVELTADEASALGDALKIAVG
CCCCCCCCCCCEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA