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The map label for this gene is dapL [H]

Identifier: 158312726

GI number: 158312726

Start: 1016766

End: 1018622

Strand: Direct

Name: dapL [H]

Synonym: Franean1_0872

Alternate gene names: 158312726

Gene position: 1016766-1018622 (Clockwise)

Preceding gene: 158312725

Following gene: 158312727

Centisome position: 11.32

GC content: 75.07

Gene sequence:

>1857_bases
GTGCGGCTGCCCGACTTCCCATGGGACCACCTGGTCTCGTACAAGGAGAAGGCGCGGTCGCATCCGTACGGGCTGGTGGA
CCTGTCGGTGGGTACCCCGGTCGACGCGACGCCGGCGGTGGTGCGCCACGCCCTCGCCGGTGCCGCGGACTCCCCGGGGT
ACCCGCTCACCACAGGCACGCCCGATCTTCGTGAGGCGGCTGCCGGCTGGCTGGCCCGCCGGCTCGGTGTGCTGGTGGAG
CCGTCCGCCGTGCTGCCGGTGCTGGGCACGAAGGAGCTGGTCGCCCAGCTTCCCTCGCAGCTCGGCCTGGAGCCCGGGGA
CCGCGTCTGGGTGCCCACCCCGGCCTACCCGACCTACGAGGTCGGCGCCCTGCTCGCGCGCTGCGAGCCGGTCGTCGGCC
CCGCCGAGGGTGTTGCCCTCGTCTGGCTGAACTCGCCCGGCAACCCGACGGGGCGTGTCCTGTCGGTGGACGAGATGCGC
GCAGTGGTCACCTGGGCGCGTGAGCGCGGCGTGATCGTCGCCAGCGACGAGTGCTACATCGAGCTGGGCTGGGAGGCCCG
CGCGGTCTCGGTGCTCCACCCGGACGTCTGCGGCGGCTCCCACGAGGGCCTGCTCGCCGTCCACTCGTTGTCCAAGCGCT
CGAACCTGGCCGGGTACCGGGCCGGGTTCGTCACCGGTGACCCCGATCTCGTCGACGGGCTGCTCCAGCTCCGCAAGCAC
GCGGGGCTGATGATGCCGTCGCCGGTGCAGGCGGCGACGACGGCCGCGCTCGCGGACGACATGCACGTCGCCGACCAGCG
CGCCCGCTACGCCAACCGGCGGGCGGTACTCGCCGCGGCGCTCGCCGTCGCGGGCTTCACGATCGACCACAGCGAGGCCG
GTCTCTATTTGTGGGCCACCCGCGGCGAGGACTGCTGGGCCACGGTGGACGCGCTGTCCAGCGTGGGTGTCCTGGTCGCG
CCGGGGAGCTTCTACGGCGAGTCCGGCCGGCGGCACGTGCGGGTCGCGCTGACCGCCCCGGACGCCCAGATCGCCACCGT
TCCGGAGCGCATGACCATGCTCCCCGCGGCAGGCGCCCCGAGCGGCGCGCAGGCCGCGCCGGGCTGGGGCCAGCAGCCGG
CCGGCTACCCGCCCGCCGGGCCGCCCGGCCCCGCGGCTTCGGGGCCGCATCCGGTGGGTGCGGGCCGCGGCGGTGACCAG
GGCTGGTCCTCCGGCCGTCCGTCCGGGTACGGAGCGGGTGAGCCGGCGCGGGCCGACCAGAGCTCTGTCGGTTCGTTCGA
CCGGTACCGGGCGAGCCAGCCCGATCCGGGCGCCCGGCCGTCCCAGGACTACCGCCCCACCCAGGACTTCGGCTCGGCCC
AGGAATACCGCCAGCCTGAGGAATACCGGCAGTCCCAGGACTTCCGGGGAGGCCGGGACATCCGCTCGGGGCAGCCCGGA
GATCCCTACCGGGACCCCCAGGGTGCCCACGGCCGGTCGGGGTCGTACTCCGGCGCCGGTGAGGGCGCCGCCGGGCAGGG
CACGCCACCGCCGTACCAGACGGGTCAGCTGCCCGTCCCCTCGTATGAGAACGGCGGCGGCAGCGCGCCGCAGCAGCAAC
CGCCGCTGCCTTACCAGACCGGGCAGATGGCCGTGCCTCCGTACCAGACGGGCCAGCTGCCGGTGCCGCCGTATGAGACC
GGCCAGCTGCCGGTGCCGCCGTATGAGACCGGCCAGCTGCCGGTGCCGCCGTATGAGACCGGCCAGCTGCCGGTCCCGCC
GTACCAGACCGGGCAGATGGCCGTCCCGCGGCCCGGTGGTGGCGAGCAGGGAGACCGGAACACGCCGGGCTGGGGCTCGG
AGCCCGACGTCCGCTGA

Upstream 100 bases:

>100_bases
CGCCCACCATCTCCGCGCTGGCTCCCCAGGGCGAGTCCTGACCGGTTCAGGGGAGTCGGCGAGACCGTCCCGGACGATCA
GATCGCCGGGACGGTCGCGG

Downstream 100 bases:

>100_bases
CCGCCGCGGCCGCGAGCGCCGCTCACCCCGAGACCCGTAGGGTCTTATCCGTGAGCAGCGTGAGCGGAGCAAACCCCAGC
CCATCGGACGCGGGTGTCAC

Product: N-succinyldiaminopimelate aminotransferase

Products: NA

Alternate protein names: DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase [H]

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MRLPDFPWDHLVSYKEKARSHPYGLVDLSVGTPVDATPAVVRHALAGAADSPGYPLTTGTPDLREAAAGWLARRLGVLVE
PSAVLPVLGTKELVAQLPSQLGLEPGDRVWVPTPAYPTYEVGALLARCEPVVGPAEGVALVWLNSPGNPTGRVLSVDEMR
AVVTWARERGVIVASDECYIELGWEARAVSVLHPDVCGGSHEGLLAVHSLSKRSNLAGYRAGFVTGDPDLVDGLLQLRKH
AGLMMPSPVQAATTAALADDMHVADQRARYANRRAVLAAALAVAGFTIDHSEAGLYLWATRGEDCWATVDALSSVGVLVA
PGSFYGESGRRHVRVALTAPDAQIATVPERMTMLPAAGAPSGAQAAPGWGQQPAGYPPAGPPGPAASGPHPVGAGRGGDQ
GWSSGRPSGYGAGEPARADQSSVGSFDRYRASQPDPGARPSQDYRPTQDFGSAQEYRQPEEYRQSQDFRGGRDIRSGQPG
DPYRDPQGAHGRSGSYSGAGEGAAGQGTPPPYQTGQLPVPSYENGGGSAPQQQPPLPYQTGQMAVPPYQTGQLPVPPYET
GQLPVPPYETGQLPVPPYETGQLPVPPYQTGQMAVPRPGGGEQGDRNTPGWGSEPDVR

Sequences:

>Translated_618_residues
MRLPDFPWDHLVSYKEKARSHPYGLVDLSVGTPVDATPAVVRHALAGAADSPGYPLTTGTPDLREAAAGWLARRLGVLVE
PSAVLPVLGTKELVAQLPSQLGLEPGDRVWVPTPAYPTYEVGALLARCEPVVGPAEGVALVWLNSPGNPTGRVLSVDEMR
AVVTWARERGVIVASDECYIELGWEARAVSVLHPDVCGGSHEGLLAVHSLSKRSNLAGYRAGFVTGDPDLVDGLLQLRKH
AGLMMPSPVQAATTAALADDMHVADQRARYANRRAVLAAALAVAGFTIDHSEAGLYLWATRGEDCWATVDALSSVGVLVA
PGSFYGESGRRHVRVALTAPDAQIATVPERMTMLPAAGAPSGAQAAPGWGQQPAGYPPAGPPGPAASGPHPVGAGRGGDQ
GWSSGRPSGYGAGEPARADQSSVGSFDRYRASQPDPGARPSQDYRPTQDFGSAQEYRQPEEYRQSQDFRGGRDIRSGQPG
DPYRDPQGAHGRSGSYSGAGEGAAGQGTPPPYQTGQLPVPSYENGGGSAPQQQPPLPYQTGQMAVPPYQTGQLPVPPYET
GQLPVPPYETGQLPVPPYETGQLPVPPYQTGQMAVPRPGGGEQGDRNTPGWGSEPDVR
>Mature_618_residues
MRLPDFPWDHLVSYKEKARSHPYGLVDLSVGTPVDATPAVVRHALAGAADSPGYPLTTGTPDLREAAAGWLARRLGVLVE
PSAVLPVLGTKELVAQLPSQLGLEPGDRVWVPTPAYPTYEVGALLARCEPVVGPAEGVALVWLNSPGNPTGRVLSVDEMR
AVVTWARERGVIVASDECYIELGWEARAVSVLHPDVCGGSHEGLLAVHSLSKRSNLAGYRAGFVTGDPDLVDGLLQLRKH
AGLMMPSPVQAATTAALADDMHVADQRARYANRRAVLAAALAVAGFTIDHSEAGLYLWATRGEDCWATVDALSSVGVLVA
PGSFYGESGRRHVRVALTAPDAQIATVPERMTMLPAAGAPSGAQAAPGWGQQPAGYPPAGPPGPAASGPHPVGAGRGGDQ
GWSSGRPSGYGAGEPARADQSSVGSFDRYRASQPDPGARPSQDYRPTQDFGSAQEYRQPEEYRQSQDFRGGRDIRSGQPG
DPYRDPQGAHGRSGSYSGAGEGAAGQGTPPPYQTGQLPVPSYENGGGSAPQQQPPLPYQTGQMAVPPYQTGQLPVPPYET
GQLPVPPYETGQLPVPPYETGQLPVPPYQTGQMAVPRPGGGEQGDRNTPGWGSEPDVR

Specific function: Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788722, Length=378, Percent_Identity=30.4232804232804, Blast_Score=142, Evalue=9e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR019881
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.83 [H]

Molecular weight: Translated: 64783; Mature: 64783

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPDFPWDHLVSYKEKARSHPYGLVDLSVGTPVDATPAVVRHALAGAADSPGYPLTTGT
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDLREAAAGWLARRLGVLVEPSAVLPVLGTKELVAQLPSQLGLEPGDRVWVPTPAYPTYE
HHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH
VGALLARCEPVVGPAEGVALVWLNSPGNPTGRVLSVDEMRAVVTWARERGVIVASDECYI
HHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHCCEEEECCCEEE
ELGWEARAVSVLHPDVCGGSHEGLLAVHSLSKRSNLAGYRAGFVTGDPDLVDGLLQLRKH
EECCCEEEEEEECCHHCCCCCCCEEEEEHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHH
AGLMMPSPVQAATTAALADDMHVADQRARYANRRAVLAAALAVAGFTIDHSEAGLYLWAT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEE
RGEDCWATVDALSSVGVLVAPGSFYGESGRRHVRVALTAPDAQIATVPERMTMLPAAGAP
CCCCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCEEEECCHHHHCCCCCCCC
SGAQAAPGWGQQPAGYPPAGPPGPAASGPHPVGAGRGGDQGWSSGRPSGYGAGEPARADQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
SSVGSFDRYRASQPDPGARPSQDYRPTQDFGSAQEYRQPEEYRQSQDFRGGRDIRSGQPG
HHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCHHHHHHHCCCCCCCCCCCCCC
DPYRDPQGAHGRSGSYSGAGEGAAGQGTPPPYQTGQLPVPSYENGGGSAPQQQPPLPYQT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQMAVPPYQTGQLPVPPYETGQLPVPPYETGQLPVPPYETGQLPVPPYQTGQMAVPRPGG
CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
GEQGDRNTPGWGSEPDVR
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLPDFPWDHLVSYKEKARSHPYGLVDLSVGTPVDATPAVVRHALAGAADSPGYPLTTGT
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDLREAAAGWLARRLGVLVEPSAVLPVLGTKELVAQLPSQLGLEPGDRVWVPTPAYPTYE
HHHHHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH
VGALLARCEPVVGPAEGVALVWLNSPGNPTGRVLSVDEMRAVVTWARERGVIVASDECYI
HHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHCCEEEECCCEEE
ELGWEARAVSVLHPDVCGGSHEGLLAVHSLSKRSNLAGYRAGFVTGDPDLVDGLLQLRKH
EECCCEEEEEEECCHHCCCCCCCEEEEEHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHH
AGLMMPSPVQAATTAALADDMHVADQRARYANRRAVLAAALAVAGFTIDHSEAGLYLWAT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEE
RGEDCWATVDALSSVGVLVAPGSFYGESGRRHVRVALTAPDAQIATVPERMTMLPAAGAP
CCCCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCEEEECCHHHHCCCCCCCC
SGAQAAPGWGQQPAGYPPAGPPGPAASGPHPVGAGRGGDQGWSSGRPSGYGAGEPARADQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
SSVGSFDRYRASQPDPGARPSQDYRPTQDFGSAQEYRQPEEYRQSQDFRGGRDIRSGQPG
HHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCHHHHHHHCCCCCCCCCCCCCC
DPYRDPQGAHGRSGSYSGAGEGAAGQGTPPPYQTGQLPVPSYENGGGSAPQQQPPLPYQT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQMAVPPYQTGQLPVPPYETGQLPVPPYETGQLPVPPYETGQLPVPPYQTGQMAVPRPGG
CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
GEQGDRNTPGWGSEPDVR
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA