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The map label for this gene is xseB [H]

Identifier: 158312703

GI number: 158312703

Start: 993816

End: 994148

Strand: Direct

Name: xseB [H]

Synonym: Franean1_0847

Alternate gene names: 158312703

Gene position: 993816-994148 (Clockwise)

Preceding gene: 158312702

Following gene: 158312704

Centisome position: 11.06

GC content: 72.67

Gene sequence:

>333_bases
ATGACCGATCTTGACCGTCAGCGGAGCCCCACCACTGGACCCGGTTCGGGCGGTGTTCCGGAGACCACGCCAGGGACTAC
CGCGGGTACTGCGCCGGGACCGACCTCCGGGGCCGCCGCGGGTGTCACCCCGGGGACCGCTTCCGGTCTCACCTTCGAGG
CGGCTCGCGCGGAGCTGGAGGATGTCGTCCGCAGGCTGGAGGCCGGGGGATGCGCTCTCGAGGAGTCCCTCGCGCTCTGG
GAACGCGGCGAGGAACTTGCCGCCCTCTGCCAGCGCTTCCTCGACGGCGCCCGGGCCCGCCTCACCCCCGCCACGACCTC
CGAACCTTCCTGA

Upstream 100 bases:

>100_bases
CTCTCGAACGGTTCTCCCGGCGTTCCTGGCGCTCCCGGGCCCGGGAGCGTGCTCACGGCCGTCGAACGGGACAGCCGTCG
AACGGGACAGGAGAACTCAC

Downstream 100 bases:

>100_bases
ATCCCACCAGCCCTGGTGCGCACACATTCGGTGGGGTCGGTCGGGACGCCCGGGCTCCGGGGGGCCGTAGGGTCGGGTTC
CGAGGTTCGGCGGGTGATGG

Product: exodeoxyribonuclease VII, small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTDLDRQRSPTTGPGSGGVPETTPGTTAGTAPGPTSGAAAGVTPGTASGLTFEAARAELEDVVRRLEAGGCALEESLALW
ERGEELAALCQRFLDGARARLTPATTSEPS

Sequences:

>Translated_110_residues
MTDLDRQRSPTTGPGSGGVPETTPGTTAGTAPGPTSGAAAGVTPGTASGLTFEAARAELEDVVRRLEAGGCALEESLALW
ERGEELAALCQRFLDGARARLTPATTSEPS
>Mature_109_residues
TDLDRQRSPTTGPGSGGVPETTPGTTAGTAPGPTSGAAAGVTPGTASGLTFEAARAELEDVVRRLEAGGCALEESLALWE
RGEELAALCQRFLDGARARLTPATTSEPS

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761
- ProDom:   PD028235 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 11084; Mature: 10953

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLDRQRSPTTGPGSGGVPETTPGTTAGTAPGPTSGAAAGVTPGTASGLTFEAARAELE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DVVRRLEAGGCALEESLALWERGEELAALCQRFLDGARARLTPATTSEPS
HHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDLDRQRSPTTGPGSGGVPETTPGTTAGTAPGPTSGAAAGVTPGTASGLTFEAARAELE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DVVRRLEAGGCALEESLALWERGEELAALCQRFLDGARARLTPATTSEPS
HHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]