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The map label for this gene is rutD [H]

Identifier: 158312675

GI number: 158312675

Start: 957568

End: 958506

Strand: Direct

Name: rutD [H]

Synonym: Franean1_0819

Alternate gene names: 158312675

Gene position: 957568-958506 (Clockwise)

Preceding gene: 158312672

Following gene: 158312682

Centisome position: 10.66

GC content: 71.35

Gene sequence:

>939_bases
ATGAGAATCGTTCCCGTCAACGGCCTCGAGCTGGCCGTCGAGGTGCACGGTGATCCGGACGGACTGCCGTTGGTACTCGT
GAGCGGGATGGGACAGCATCTCGTCGGTTGGCATCCCGAGCTGCTCGCGAGCATGGTCCGGCGCGGCTACCGGGTGATCG
TCTTCGACAACCGGGACGTCGGGCACTCCACCCACCTCGACTGGCACGGCGAGCCCGACCTGCTGGCCATCGTGAACGGC
GAGACGGAGCTCGCGCCCTACCGGCTCGAGGACCTGGCCGCCGACACGCTGGGCCTGATGGACGTCCTCGGGCTCGACTC
CGCCCACGTCCTGGGCCTCTCTCTGGGCGGGATGGTGGCGCAGATCCTCGCGCTGACCAGCCCCGAGCGGGTGCGCAGCA
TCACCTCGGTGATGTCACACCCCGGCGATCCCACCGTGAAGCCGACGGACGAGGCCGTCGACCTGCTGCTGCGCCCCAGT
CCGACCAACCTGGCGGAGTTCGTCCTCGCCGCCGAGGAGTCCGCCCGGGTCATCGGCTCGCCGGAGTTCGCGCTCGACGT
CGAATGGCTGCGCACCCGCTCGGCGGTGCTCTGGGAGCGGCGGCAGAACCCCGCGGGGGTCGCCCGGCAGCTCGCCGCCG
TCCTGGTGGCGCCGAACCGCACCGAGGCGCTGCGCGCGCTGCGGGTGCCGGCCCTCGTCGTACACGGCACGCTCGATCCG
CTGATCCCCGTCCGCGGTGGACGGCTGACCGCGGCCGCGATCCCGTCCGCGGAGCTGATGGAGATTGACGGGATGGGGCA
CGACCTGCCCAGACAGATCTGGAGCCGGCTGCTGGACCGGCTGGAGGACGTCACACACCACGGCGAGACCGTGCGCGCGG
ATGCGGCGCGCACGCGGGCCCCGGACAGCATGGTCAGGACCCCGGTTTCACCACCATGA

Upstream 100 bases:

>100_bases
CCGAGGGCACGTGGATCACCCCTGTGTGACGCGGGTGACATGAAGCCGATTCGCGGCCGTGCACTGACGAAACGGCGGGG
TGGTCGCTACCGTCCCGGGC

Downstream 100 bases:

>100_bases
GCGCGATCACCACGACCCAGCAGGTGACGGCGGCCGCGGCCCCGATGGTGATCATCGGGAGCTGGCGGCGCGCGTCACCG
CCGCGTTCGATCTCGTGGAC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRIVPVNGLELAVEVHGDPDGLPLVLVSGMGQHLVGWHPELLASMVRRGYRVIVFDNRDVGHSTHLDWHGEPDLLAIVNG
ETELAPYRLEDLAADTLGLMDVLGLDSAHVLGLSLGGMVAQILALTSPERVRSITSVMSHPGDPTVKPTDEAVDLLLRPS
PTNLAEFVLAAEESARVIGSPEFALDVEWLRTRSAVLWERRQNPAGVARQLAAVLVAPNRTEALRALRVPALVVHGTLDP
LIPVRGGRLTAAAIPSAELMEIDGMGHDLPRQIWSRLLDRLEDVTHHGETVRADAARTRAPDSMVRTPVSPP

Sequences:

>Translated_312_residues
MRIVPVNGLELAVEVHGDPDGLPLVLVSGMGQHLVGWHPELLASMVRRGYRVIVFDNRDVGHSTHLDWHGEPDLLAIVNG
ETELAPYRLEDLAADTLGLMDVLGLDSAHVLGLSLGGMVAQILALTSPERVRSITSVMSHPGDPTVKPTDEAVDLLLRPS
PTNLAEFVLAAEESARVIGSPEFALDVEWLRTRSAVLWERRQNPAGVARQLAAVLVAPNRTEALRALRVPALVVHGTLDP
LIPVRGGRLTAAAIPSAELMEIDGMGHDLPRQIWSRLLDRLEDVTHHGETVRADAARTRAPDSMVRTPVSPP
>Mature_312_residues
MRIVPVNGLELAVEVHGDPDGLPLVLVSGMGQHLVGWHPELLASMVRRGYRVIVFDNRDVGHSTHLDWHGEPDLLAIVNG
ETELAPYRLEDLAADTLGLMDVLGLDSAHVLGLSLGGMVAQILALTSPERVRSITSVMSHPGDPTVKPTDEAVDLLLRPS
PTNLAEFVLAAEESARVIGSPEFALDVEWLRTRSAVLWERRQNPAGVARQLAAVLVAPNRTEALRALRVPALVVHGTLDP
LIPVRGGRLTAAAIPSAELMEIDGMGHDLPRQIWSRLLDRLEDVTHHGETVRADAARTRAPDSMVRTPVSPP

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 33767; Mature: 33767

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVPVNGLELAVEVHGDPDGLPLVLVSGMGQHLVGWHPELLASMVRRGYRVIVFDNRDV
CEEECCCCEEEEEEECCCCCCCCEEEECCCCCHHCCCCHHHHHHHHHCCCEEEEECCCCC
GHSTHLDWHGEPDLLAIVNGETELAPYRLEDLAADTLGLMDVLGLDSAHVLGLSLGGMVA
CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QILALTSPERVRSITSVMSHPGDPTVKPTDEAVDLLLRPSPTNLAEFVLAAEESARVIGS
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCCCCHHHHHHHHCCCCCEECC
PEFALDVEWLRTRSAVLWERRQNPAGVARQLAAVLVAPNRTEALRALRVPALVVHGTLDP
CCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCC
LIPVRGGRLTAAAIPSAELMEIDGMGHDLPRQIWSRLLDRLEDVTHHGETVRADAARTRA
CCCCCCCEEEEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHCCC
PDSMVRTPVSPP
CHHHHCCCCCCC
>Mature Secondary Structure
MRIVPVNGLELAVEVHGDPDGLPLVLVSGMGQHLVGWHPELLASMVRRGYRVIVFDNRDV
CEEECCCCEEEEEEECCCCCCCCEEEECCCCCHHCCCCHHHHHHHHHCCCEEEEECCCCC
GHSTHLDWHGEPDLLAIVNGETELAPYRLEDLAADTLGLMDVLGLDSAHVLGLSLGGMVA
CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QILALTSPERVRSITSVMSHPGDPTVKPTDEAVDLLLRPSPTNLAEFVLAAEESARVIGS
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCCCCHHHHHHHHCCCCCEECC
PEFALDVEWLRTRSAVLWERRQNPAGVARQLAAVLVAPNRTEALRALRVPALVVHGTLDP
CCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCC
LIPVRGGRLTAAAIPSAELMEIDGMGHDLPRQIWSRLLDRLEDVTHHGETVRADAARTRA
CCCCCCCEEEEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHCCC
PDSMVRTPVSPP
CHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA