Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312619

Identifier: 158312619

GI number: 158312619

Start: 889061

End: 889609

Strand: Direct

Name: 158312619

Synonym: Franean1_0763

Alternate gene names: NA

Gene position: 889061-889609 (Clockwise)

Preceding gene: 158312616

Following gene: 158312622

Centisome position: 9.9

GC content: 71.95

Gene sequence:

>549_bases
GTGATCACAGACGCACAGCAGGCGCGGTCGCGGTGGCGGCGCGCGCTGCGCTCCGGGGCGCTCGGTGCGGCGCTTCTGAT
CGCCGTGCTGAACGTGCGAATGATCGTCTTCCCGAAGATCGACAAGCCGCGTCCCGTGGACGCGATCTTCATGCTCGGGG
GTCCGGGCGAACGGCGGGACAAGGCCGTCGAGCTGGCCAGGTCCGGCATCGCCCCGGTTCTGGTGGTCTCGATGCCCGGC
ACCCGGCGGTGCCCCGACGCGGCCGAGGTCGGCCGGGACATCCAGGTCATCTGCTTCTGGCCGGACCCGGTGACCACCCA
GGGCGAGGCTCGCGAGGCCGGCCGCCTGGCCAGGATCCACGGCTGGCGCTCGATCCTGTTCGTCACGGACCGCTCCCAGG
ACAGCCGGGCCAGGCTGCGCATCGAGCGCTGCTACGACGGTGAGGTCCTGGTGGACGCCGTCGGGACCCCCCGACGGCAG
TGGCCGTACCTGATCGCCTACCAGACCGCGGCGACCGTCAAGGCGCTGGTCTGGCAGCGCGGCTGCTGA

Upstream 100 bases:

>100_bases
CCGCGTCGGGTGATTCACCGCGGGGGGTGGTCGGGGAACGTGAAGCAGAGCACGTCTCGACCGGTCCGCGGCCACAGGTA
CGCCGTCTACAGTCACGAGT

Downstream 100 bases:

>100_bases
TCGACAGGCGGGCCGGCAGCGATCAGCCGAGATCGGCGGCCAGGTCGGCAGCGGTCAGCAGTCCCGCTGGAAGATCAGCG
CCTTGCCCATCGCGGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MITDAQQARSRWRRALRSGALGAALLIAVLNVRMIVFPKIDKPRPVDAIFMLGGPGERRDKAVELARSGIAPVLVVSMPG
TRRCPDAAEVGRDIQVICFWPDPVTTQGEAREAGRLARIHGWRSILFVTDRSQDSRARLRIERCYDGEVLVDAVGTPRRQ
WPYLIAYQTAATVKALVWQRGC

Sequences:

>Translated_182_residues
MITDAQQARSRWRRALRSGALGAALLIAVLNVRMIVFPKIDKPRPVDAIFMLGGPGERRDKAVELARSGIAPVLVVSMPG
TRRCPDAAEVGRDIQVICFWPDPVTTQGEAREAGRLARIHGWRSILFVTDRSQDSRARLRIERCYDGEVLVDAVGTPRRQ
WPYLIAYQTAATVKALVWQRGC
>Mature_182_residues
MITDAQQARSRWRRALRSGALGAALLIAVLNVRMIVFPKIDKPRPVDAIFMLGGPGERRDKAVELARSGIAPVLVVSMPG
TRRCPDAAEVGRDIQVICFWPDPVTTQGEAREAGRLARIHGWRSILFVTDRSQDSRARLRIERCYDGEVLVDAVGTPRRQ
WPYLIAYQTAATVKALVWQRGC

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20305; Mature: 20305

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDAQQARSRWRRALRSGALGAALLIAVLNVRMIVFPKIDKPRPVDAIFMLGGPGERRD
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEECCCCCHHH
KAVELARSGIAPVLVVSMPGTRRCPDAAEVGRDIQVICFWPDPVTTQGEAREAGRLARIH
HHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCHHHCCEEEEE
GWRSILFVTDRSQDSRARLRIERCYDGEVLVDAVGTPRRQWPYLIAYQTAATVKALVWQR
CCEEEEEEECCCCCCHHHEEEEECCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHC
GC
CC
>Mature Secondary Structure
MITDAQQARSRWRRALRSGALGAALLIAVLNVRMIVFPKIDKPRPVDAIFMLGGPGERRD
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEECCCCCHHH
KAVELARSGIAPVLVVSMPGTRRCPDAAEVGRDIQVICFWPDPVTTQGEAREAGRLARIH
HHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCHHHCCEEEEE
GWRSILFVTDRSQDSRARLRIERCYDGEVLVDAVGTPRRQWPYLIAYQTAATVKALVWQR
CCEEEEEEECCCCCCHHHEEEEECCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHC
GC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA