| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is wbbL [H]
Identifier: 158312615
GI number: 158312615
Start: 885942
End: 886964
Strand: Direct
Name: wbbL [H]
Synonym: Franean1_0759
Alternate gene names: 158312615
Gene position: 885942-886964 (Clockwise)
Preceding gene: 158312614
Following gene: 158312616
Centisome position: 9.86
GC content: 72.14
Gene sequence:
>1023_bases GTGTCCGTGCTGGTCGTGTCCTACAACACCGCCGAGCTGACGGTCCGGTGCCTGGAGTCCGTCCTGGCTGAGCCGGCCGG GGCCGAGATTGAGATCATCGTCGTAGACAACGCCTCGACGGACGGCTCCCCGGACGCCATTCGGGACGCGTTCCCGGCGG TGCGGCTGATCGAGTCGGCGACGAACCTCGGATTCGGCCGCGCGATCAACCTGGCGGCCTCCCACGCCGGCGGGGACTAT CTGCTCCTGCTGAACCCCGACGCCGTCGTCCTCGATCGGGCGGTCGCCGAGATCCTCACCTTCGCCCGCGGGAACCCGGC CTGCGGGCTCTACGGCGGGCGGACGCTGCGGCCAGACGGATCGGTCGACCCGAGCTCCTGCTGGGGGGCACCCAGCCTGT GGAGCCTGGCGTGCTTCGGGGTCGGCCTGTCGACGATGTTCCGCGGATCGAGGATCTTCGATCCGGAGTCGCTCGGGCGC TGGCAGCGCGACAGCGTCCGCGAGGTCGGTGTCGTCACCGGATGCCTGCTGCTGGTCAGACGCGACCTCTTCGAACGGCT GGGCGGGTTCGACCCCCGGTTCTTCATGTACGGGGAGGACACCGACCTGTCGATGCGGGCGCGGGCCGCCGGCTACCGCC CCACGATCGTCCCGACCGCGGCGATCGTGCACCACGTCGGGGCCTCGTCCTCGAACTGGGCGGCCAAGCACGTGCTCGTC CTCCGCGGGAAGACCACGTTGGCGAGGAAGCACTGGACGGGGTGGCGGCAGGGGTTCTGCCTGGCGATGATCGTTCTTGG GGTGGCGCTGCGGGCCCTGGCCGATCTGGGGTCGGGGCTGGCCCGTGGGCGGCCGCGGGCGCGTGCGAGCGACTGGCGCG CGCTCTGGCGCCGGCGGCGGGACTGGTGGCCCGGCTACCCCCCGTACACCGAGCCCACGGGCGGCGTCCCCAGCCAGTCG CGCGTCCCGCCCGAGCCCGCATCCGGCACGTGTCACCCGTCCCGACATCTGACGAGGCCATGA
Upstream 100 bases:
>100_bases CCGTCCAGGCGGACCGGCCTGAGCAGAACGGCCGTACCGGTGCGGACGGCACCGGGCGGCGTCCCGGCTCCCACCCGGCG GGTGAGCAGTGACCGTCGAG
Downstream 100 bases:
>100_bases GCAGTTCGCTACCCGAGCGGTCCCTCGACCTGTGGCGCAGGGCCCGGAGCCGGGCCTTCACCCGGTTCCTGGCCGGGTCG TTCGGGGCGCTCGGCCCGCG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSVLVVSYNTAELTVRCLESVLAEPAGAEIEIIVVDNASTDGSPDAIRDAFPAVRLIESATNLGFGRAINLAASHAGGDY LLLLNPDAVVLDRAVAEILTFARGNPACGLYGGRTLRPDGSVDPSSCWGAPSLWSLACFGVGLSTMFRGSRIFDPESLGR WQRDSVREVGVVTGCLLLVRRDLFERLGGFDPRFFMYGEDTDLSMRARAAGYRPTIVPTAAIVHHVGASSSNWAAKHVLV LRGKTTLARKHWTGWRQGFCLAMIVLGVALRALADLGSGLARGRPRARASDWRALWRRRRDWWPGYPPYTEPTGGVPSQS RVPPEPASGTCHPSRHLTRP
Sequences:
>Translated_340_residues MSVLVVSYNTAELTVRCLESVLAEPAGAEIEIIVVDNASTDGSPDAIRDAFPAVRLIESATNLGFGRAINLAASHAGGDY LLLLNPDAVVLDRAVAEILTFARGNPACGLYGGRTLRPDGSVDPSSCWGAPSLWSLACFGVGLSTMFRGSRIFDPESLGR WQRDSVREVGVVTGCLLLVRRDLFERLGGFDPRFFMYGEDTDLSMRARAAGYRPTIVPTAAIVHHVGASSSNWAAKHVLV LRGKTTLARKHWTGWRQGFCLAMIVLGVALRALADLGSGLARGRPRARASDWRALWRRRRDWWPGYPPYTEPTGGVPSQS RVPPEPASGTCHPSRHLTRP >Mature_339_residues SVLVVSYNTAELTVRCLESVLAEPAGAEIEIIVVDNASTDGSPDAIRDAFPAVRLIESATNLGFGRAINLAASHAGGDYL LLLNPDAVVLDRAVAEILTFARGNPACGLYGGRTLRPDGSVDPSSCWGAPSLWSLACFGVGLSTMFRGSRIFDPESLGRW QRDSVREVGVVTGCLLLVRRDLFERLGGFDPRFFMYGEDTDLSMRARAAGYRPTIVPTAAIVHHVGASSSNWAAKHVLVL RGKTTLARKHWTGWRQGFCLAMIVLGVALRALADLGSGLARGRPRARASDWRALWRRRRDWWPGYPPYTEPTGGVPSQSR VPPEPASGTCHPSRHLTRP
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 36874; Mature: 36742
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLVVSYNTAELTVRCLESVLAEPAGAEIEIIVVDNASTDGSPDAIRDAFPAVRLIESA CEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH TNLGFGRAINLAASHAGGDYLLLLNPDAVVLDRAVAEILTFARGNPACGLYGGRTLRPDG HCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCCCCEECCCC SVDPSSCWGAPSLWSLACFGVGLSTMFRGSRIFDPESLGRWQRDSVREVGVVTGCLLLVR CCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH RDLFERLGGFDPRFFMYGEDTDLSMRARAAGYRPTIVPTAAIVHHVGASSSNWAAKHVLV HHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEE LRGKTTLARKHWTGWRQGFCLAMIVLGVALRALADLGSGLARGRPRARASDWRALWRRRR EECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH DWWPGYPPYTEPTGGVPSQSRVPPEPASGTCHPSRHLTRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVLVVSYNTAELTVRCLESVLAEPAGAEIEIIVVDNASTDGSPDAIRDAFPAVRLIESA EEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH TNLGFGRAINLAASHAGGDYLLLLNPDAVVLDRAVAEILTFARGNPACGLYGGRTLRPDG HCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCCCCEECCCC SVDPSSCWGAPSLWSLACFGVGLSTMFRGSRIFDPESLGRWQRDSVREVGVVTGCLLLVR CCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH RDLFERLGGFDPRFFMYGEDTDLSMRARAAGYRPTIVPTAAIVHHVGASSSNWAAKHVLV HHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEE LRGKTTLARKHWTGWRQGFCLAMIVLGVALRALADLGSGLARGRPRARASDWRALWRRRR EECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH DWWPGYPPYTEPTGGVPSQSRVPPEPASGTCHPSRHLTRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]