| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312613
Identifier: 158312613
GI number: 158312613
Start: 884384
End: 885307
Strand: Direct
Name: 158312613
Synonym: Franean1_0757
Alternate gene names: NA
Gene position: 884384-885307 (Clockwise)
Preceding gene: 158312612
Following gene: 158312614
Centisome position: 9.85
GC content: 72.08
Gene sequence:
>924_bases GTGACGGCACCGCTCTCCGCGGGCTCCGCCCCGGCGCCGCACGGCGCCGGCGATGTCCCAGCCAGCGTCGTCCTGGCCAG CGTCGTCGTGCCGGCGCACAACGAGGAGTCCGTCATCGGACGGTGCCTCGCGGCGCTCAGCGTCGGGCTGCCCGCCGGAG CACTCGACGTGATCGTGGTGTGCAACGGATGCACGGACGGCACCGCCGCGGCCGCCCGTGCCCGTGGCGTCCGGGTGATC GAGACGGATCGGGCGAACAAGGCGGCCGCCCTGAACACCGGGGACGCGGCGGCCATGGCCTTCCCGCGCTTCTACGTCGA CGCCGATGTGGAGGTCGCCGGAGCGGCGCTGCTCGAGGTCGCCGACGTCCTGCGCACGGGTGCGGCACTCGCCGCGGCGC CCGCGCTGCGTCCGTGCATGACCGGGGTGGCCCGGCCCGTCCGCGACTACTACCGGATCTGGATGCGCCTGCCCTACGTC GCCGACGGGCACGTGGGCTCCGGAGTCGTCGGTGTCAGCGATGCCGGGCGGAAGCGTTTCACCCGCTTTCCCGAGGCCAT CGCCGACGATCTTTACCTCTACCACCAGTTCAGCGCGGAGGAACGGACCACGGTGGACTCCGTCCACTTCACCGTCTATC CCGCGAGGACGGTGCGGGATTTCGTCCGGAGGAAGATCCGGGTGTACGCCGGGAACATCGAACTCCGCGGCCGTGGGCTG GTGCCCGCGGAGAACCGGAACACCGGCAGCGCGTCCTGGCTGTCCGTCGTCGCCGCCGATCGCCGGCTGCTCACCGCCGC CCCCGCCTACCTCGCCATCTCGGCGGTGGCGAAGCTGCTGGCCATCCGGAAGGTCCGCCACGGCGACCTCGGTGCCTGGG AGCGTGACGACAGCAGCAGGCGCCTTCTTGAGGAGACGACGTGA
Upstream 100 bases:
>100_bases CCGTCCCGGCGCCACGCCGCCGCGAGCAGGCCGGCTCCCACACGTCGGCGGCGGCACCTGGCGGCGACCACGAGGGCGAC GAGCTCAGATCGGCGACGGG
Downstream 100 bases:
>100_bases CCAGGGTTCTCGGCTTTCTTCGTTCCCTGCTCGACGCCCGCGCCCTCCTGCACTCACTGCGGATCCTCCACTTCTACAAC TACTCGCATGTCCAGCAGGT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family; Glycosyl Transferase WecB/TagA/CpsF Family; WecB/TagA/CpsF Family Glycosyl Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTAPLSAGSAPAPHGAGDVPASVVLASVVVPAHNEESVIGRCLAALSVGLPAGALDVIVVCNGCTDGTAAAARARGVRVI ETDRANKAAALNTGDAAAMAFPRFYVDADVEVAGAALLEVADVLRTGAALAAAPALRPCMTGVARPVRDYYRIWMRLPYV ADGHVGSGVVGVSDAGRKRFTRFPEAIADDLYLYHQFSAEERTTVDSVHFTVYPARTVRDFVRRKIRVYAGNIELRGRGL VPAENRNTGSASWLSVVAADRRLLTAAPAYLAISAVAKLLAIRKVRHGDLGAWERDDSSRRLLEETT
Sequences:
>Translated_307_residues MTAPLSAGSAPAPHGAGDVPASVVLASVVVPAHNEESVIGRCLAALSVGLPAGALDVIVVCNGCTDGTAAAARARGVRVI ETDRANKAAALNTGDAAAMAFPRFYVDADVEVAGAALLEVADVLRTGAALAAAPALRPCMTGVARPVRDYYRIWMRLPYV ADGHVGSGVVGVSDAGRKRFTRFPEAIADDLYLYHQFSAEERTTVDSVHFTVYPARTVRDFVRRKIRVYAGNIELRGRGL VPAENRNTGSASWLSVVAADRRLLTAAPAYLAISAVAKLLAIRKVRHGDLGAWERDDSSRRLLEETT >Mature_306_residues TAPLSAGSAPAPHGAGDVPASVVLASVVVPAHNEESVIGRCLAALSVGLPAGALDVIVVCNGCTDGTAAAARARGVRVIE TDRANKAAALNTGDAAAMAFPRFYVDADVEVAGAALLEVADVLRTGAALAAAPALRPCMTGVARPVRDYYRIWMRLPYVA DGHVGSGVVGVSDAGRKRFTRFPEAIADDLYLYHQFSAEERTTVDSVHFTVYPARTVRDFVRRKIRVYAGNIELRGRGLV PAENRNTGSASWLSVVAADRRLLTAAPAYLAISAVAKLLAIRKVRHGDLGAWERDDSSRRLLEETT
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32457; Mature: 32326
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPLSAGSAPAPHGAGDVPASVVLASVVVPAHNEESVIGRCLAALSVGLPAGALDVIVV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEE CNGCTDGTAAAARARGVRVIETDRANKAAALNTGDAAAMAFPRFYVDADVEVAGAALLEV ECCCCCCHHHHHHHCCCEEEECCCCCCCEEECCCCHHHHHCCEEEECCCHHHHHHHHHHH ADVLRTGAALAAAPALRPCMTGVARPVRDYYRIWMRLPYVADGHVGSGVVGVSDAGRKRF HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCHHHHH TRFPEAIADDLYLYHQFSAEERTTVDSVHFTVYPARTVRDFVRRKIRVYAGNIELRGRGL HHHHHHHHHHHHEEEECCCCCCCEECEEEEEEECHHHHHHHHHHHHEEEECCEEEECCCC VPAENRNTGSASWLSVVAADRRLLTAAPAYLAISAVAKLLAIRKVRHGDLGAWERDDSSR CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH RLLEETT HHHHCCC >Mature Secondary Structure TAPLSAGSAPAPHGAGDVPASVVLASVVVPAHNEESVIGRCLAALSVGLPAGALDVIVV CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEE CNGCTDGTAAAARARGVRVIETDRANKAAALNTGDAAAMAFPRFYVDADVEVAGAALLEV ECCCCCCHHHHHHHCCCEEEECCCCCCCEEECCCCHHHHHCCEEEECCCHHHHHHHHHHH ADVLRTGAALAAAPALRPCMTGVARPVRDYYRIWMRLPYVADGHVGSGVVGVSDAGRKRF HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCHHHHH TRFPEAIADDLYLYHQFSAEERTTVDSVHFTVYPARTVRDFVRRKIRVYAGNIELRGRGL HHHHHHHHHHHHEEEECCCCCCCEECEEEEEEECHHHHHHHHHHHHEEEECCEEEECCCC VPAENRNTGSASWLSVVAADRRLLTAAPAYLAISAVAKLLAIRKVRHGDLGAWERDDSSR CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH RLLEETT HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA