| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312612
Identifier: 158312612
GI number: 158312612
Start: 883050
End: 884387
Strand: Direct
Name: 158312612
Synonym: Franean1_0756
Alternate gene names: NA
Gene position: 883050-884387 (Clockwise)
Preceding gene: 158312609
Following gene: 158312613
Centisome position: 9.83
GC content: 66.52
Gene sequence:
>1338_bases GTGACGTTGAGTAATCGCGTGCTGATCATAGTGCAGAACCTGCCGGTACCGCTCGACCGACGGGTCTGGCTGGAATGTCA GGCCCTGGTGGGCGCCGGTTACGATGTGCGGGTCATATGCCCCAAGGGGCCGGGTGACCCGGACTGTGAGCTACTCGACG ACGTATACCTCTACAAGTACGATCCGTACGTCGCCACGTCCGGCGTAATCTCATACATGAAAGAGTTTTTTGTTTGCTGG ATGCGTACCGCCCGGCTGGCGCGCAAGGTCTACCGGGAACGCGGCTTCGACGTTATCCAGGTGTGCAACCCGCCGGACAC CTACGCGTTGCTCGCGTTATTCTATCGGCGGCGCGGTGTGCGCCTCGTGTACGACCAGCACGACCTCTGCCCGGAGGTCT ACCAGTCCCGTTTCGAGCGCCCGTCGCGGATTCTGCTCGCCTTCCTTTTCGCGCTCGAGCGCATCACCTACGGGCTGTCG CACCACGTCATCTCCACCAATGACTCCTACCGTGAGATCGCGATCCGCCGTGGCGGCCGGACCAGGCAGGACACGACGGT CGTGCGCAGCGGCCCGGACACCGATCGGATGCGGCCCGGCGCCGTCCACCCGGAACTGCGGAAAGGCCGCGAGTTCCTGC TCTGCTATCTCGGGGTGATGGGCCCGCAGGACGGAGTGGACAACGCGCTGCGTGCCCTCGACATCCTCGTCCACCAGCAC GGTCGCACCGACGTCCACATGGCCCTGCTCGGTTTCGGCGACTGCTATGACGATCTGCGCGCGCTCGCCACGGAGCTGGA TCTTGACGACCACGTGACCTTCACCGGTCGCGCGGACCACGAGATGATCGACAAATACCTCTCGACCGCCGACCTGGCGG TCGGACCGGACCCGATGAACCCGCTCAACAACGTGTCGACCATGAACAAGACCATGGAATACATGGCCTACGGCCTGCCC GTGGTCACGTTCGATCTCGTCGAGACCAGGGTCACCGCCGCGGACATCGCGGAATACGTCGAACCCGGCGACATCGATGG GTTCGCCGCCGCGATCGAGCGGCTGCTCGATGACCCGGAGCGGCGGGCCGACCTGTCCAAGCGGGGCCGGCAGCGCGCGG TCGAGGTACTGGACTGGAGCCTGCAGGTCCCCGGCTACGTGGATGTCTTCGACCGCATCACCGGGCGGGAGCGCCCGGCC GGCGAGCGGGTCCGCCCGAGGCCGGTTGACTGTGCCGTCCCGGCGCCACGCCGCCGCGAGCAGGCCGGCTCCCACACGTC GGCGGCGGCACCTGGCGGCGACCACGAGGGCGACGAGCTCAGATCGGCGACGGGGTGA
Upstream 100 bases:
>100_bases CCGGACGGATCGAACAACATCTGTTCTAGTATGTCGTCAGTGGGGGGCGTGTCCAGCAGCGGCGCTCACCGCAGGTTCAC TTGGTCAATCTGGGGGAGCA
Downstream 100 bases:
>100_bases CGGCACCGCTCTCCGCGGGCTCCGCCCCGGCGCCGCACGGCGCCGGCGATGTCCCAGCCAGCGTCGTCCTGGCCAGCGTC GTCGTGCCGGCGCACAACGA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Group Glycosyltransferase; Glycosyl Transferase Family Protein; Membrane-Anchored Group 1 Glycosyltransferase
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTLSNRVLIIVQNLPVPLDRRVWLECQALVGAGYDVRVICPKGPGDPDCELLDDVYLYKYDPYVATSGVISYMKEFFVCW MRTARLARKVYRERGFDVIQVCNPPDTYALLALFYRRRGVRLVYDQHDLCPEVYQSRFERPSRILLAFLFALERITYGLS HHVISTNDSYREIAIRRGGRTRQDTTVVRSGPDTDRMRPGAVHPELRKGREFLLCYLGVMGPQDGVDNALRALDILVHQH GRTDVHMALLGFGDCYDDLRALATELDLDDHVTFTGRADHEMIDKYLSTADLAVGPDPMNPLNNVSTMNKTMEYMAYGLP VVTFDLVETRVTAADIAEYVEPGDIDGFAAAIERLLDDPERRADLSKRGRQRAVEVLDWSLQVPGYVDVFDRITGRERPA GERVRPRPVDCAVPAPRRREQAGSHTSAAAPGGDHEGDELRSATG
Sequences:
>Translated_445_residues MTLSNRVLIIVQNLPVPLDRRVWLECQALVGAGYDVRVICPKGPGDPDCELLDDVYLYKYDPYVATSGVISYMKEFFVCW MRTARLARKVYRERGFDVIQVCNPPDTYALLALFYRRRGVRLVYDQHDLCPEVYQSRFERPSRILLAFLFALERITYGLS HHVISTNDSYREIAIRRGGRTRQDTTVVRSGPDTDRMRPGAVHPELRKGREFLLCYLGVMGPQDGVDNALRALDILVHQH GRTDVHMALLGFGDCYDDLRALATELDLDDHVTFTGRADHEMIDKYLSTADLAVGPDPMNPLNNVSTMNKTMEYMAYGLP VVTFDLVETRVTAADIAEYVEPGDIDGFAAAIERLLDDPERRADLSKRGRQRAVEVLDWSLQVPGYVDVFDRITGRERPA GERVRPRPVDCAVPAPRRREQAGSHTSAAAPGGDHEGDELRSATG >Mature_444_residues TLSNRVLIIVQNLPVPLDRRVWLECQALVGAGYDVRVICPKGPGDPDCELLDDVYLYKYDPYVATSGVISYMKEFFVCWM RTARLARKVYRERGFDVIQVCNPPDTYALLALFYRRRGVRLVYDQHDLCPEVYQSRFERPSRILLAFLFALERITYGLSH HVISTNDSYREIAIRRGGRTRQDTTVVRSGPDTDRMRPGAVHPELRKGREFLLCYLGVMGPQDGVDNALRALDILVHQHG RTDVHMALLGFGDCYDDLRALATELDLDDHVTFTGRADHEMIDKYLSTADLAVGPDPMNPLNNVSTMNKTMEYMAYGLPV VTFDLVETRVTAADIAEYVEPGDIDGFAAAIERLLDDPERRADLSKRGRQRAVEVLDWSLQVPGYVDVFDRITGRERPAG ERVRPRPVDCAVPAPRRREQAGSHTSAAAPGGDHEGDELRSATG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50162; Mature: 50030
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSNRVLIIVQNLPVPLDRRVWLECQALVGAGYDVRVICPKGPGDPDCELLDDVYLYKY CCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCEEEEEE DPYVATSGVISYMKEFFVCWMRTARLARKVYRERGFDVIQVCNPPDTYALLALFYRRRGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC RLVYDQHDLCPEVYQSRFERPSRILLAFLFALERITYGLSHHVISTNDSYREIAIRRGGR EEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHCCCC TRQDTTVVRSGPDTDRMRPGAVHPELRKGREFLLCYLGVMGPQDGVDNALRALDILVHQH CCCCCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC GRTDVHMALLGFGDCYDDLRALATELDLDDHVTFTGRADHEMIDKYLSTADLAVGPDPMN CCCCEEEHHHHCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCC PLNNVSTMNKTMEYMAYGLPVVTFDLVETRVTAADIAEYVEPGDIDGFAAAIERLLDDPE HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCH RRADLSKRGRQRAVEVLDWSLQVPGYVDVFDRITGRERPAGERVRPRPVDCAVPAPRRRE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH QAGSHTSAAAPGGDHEGDELRSATG HCCCCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure TLSNRVLIIVQNLPVPLDRRVWLECQALVGAGYDVRVICPKGPGDPDCELLDDVYLYKY CCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCEEEEEE DPYVATSGVISYMKEFFVCWMRTARLARKVYRERGFDVIQVCNPPDTYALLALFYRRRGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC RLVYDQHDLCPEVYQSRFERPSRILLAFLFALERITYGLSHHVISTNDSYREIAIRRGGR EEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHCCCC TRQDTTVVRSGPDTDRMRPGAVHPELRKGREFLLCYLGVMGPQDGVDNALRALDILVHQH CCCCCEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC GRTDVHMALLGFGDCYDDLRALATELDLDDHVTFTGRADHEMIDKYLSTADLAVGPDPMN CCCCEEEHHHHCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCC PLNNVSTMNKTMEYMAYGLPVVTFDLVETRVTAADIAEYVEPGDIDGFAAAIERLLDDPE HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCH RRADLSKRGRQRAVEVLDWSLQVPGYVDVFDRITGRERPAGERVRPRPVDCAVPAPRRRE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH QAGSHTSAAAPGGDHEGDELRSATG HCCCCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA