Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312609

Identifier: 158312609

GI number: 158312609

Start: 878437

End: 879867

Strand: Direct

Name: 158312609

Synonym: Franean1_0753

Alternate gene names: NA

Gene position: 878437-879867 (Clockwise)

Preceding gene: 158312608

Following gene: 158312612

Centisome position: 9.78

GC content: 71.84

Gene sequence:

>1431_bases
GTGACGCTGCCCGGACGGGCGGCGCTCCGGACGGTGGCGGCGCTCCCGATCGCCAGGTGGCGGCCGGACGCGGTGAGCGT
GCTGACACTCCTCGGCGTGCTGCTGTTCGTCATCCCGGCGCGCAACACCCTGCAGTCGCTCGGCGCCGCGGGCCGGCCGG
TGTTCCTGCTCGGCCTGGTGCTGGCCTGCGCCTGGCTGTGCACCTGGCTGCATCCCGGCCTGGTCCGCCGTGGCCGCCAG
CCGGTCCGGGGCCTGTTGCTCATCTATCTGGGTGCGCTGCTCGCCGCCTATGTGGCCGGTCAGCGCCGCGGGCTCGACGG
CGTGGAGGCCCGTGCCTCGGACCGGTCGATCCTGGCTGTCCTGGCGCTCGTCGGCATCGCGCTCGCGGCAGCCGACGGAA
TTCCCTCGCGGGCCCGGCTCGAGGTCCTGATCTCGCGCATCATGTGCTTCGGGGCCGTGATGGCGCTGTTCGGAATCGTC
CAGTACCTGACGCACGAGGACTACAGCAGGTACCTGCGGCTTCCCGGGTTCGTGATGTGGTCCCCGGCGCTCGAGTCCGT
CTCACGAGGGGGCGGCACCTCCCGGGTCGCCGGCACGGCGTCGCACTACATCGAGTTCGGTGTGGTCGTCGCCATGGTCG
TCCCGCTGGCGCTGTACCGGACTTCTCACGCTGTCACCAAGGGCGCCCGGCAGCGTGCCGCCGGGGCGCTGGTGCTGACC
GCGGCGGCCGCCCCTCTCTCCGTCTCCCGGACGGCGATCATCGGGCTTGGCTGCGTGCTGCTGGTCCAGAGCATCGTGTG
GAGCTGGCGGCGGCGGTTCAACGTGTTCGTCTGGCTGGTGATCGGGGTCGGCGCGTTCGGTGCCGCCGTGCCCGGCGTGC
TCGGCACGCTGCGCAGTCTGTTCCTGAACTACAAGACTGATCCCAGCTATCAGGGACGGATCGCGGACTACGCGGTCGCG
CAGGCCTACATCAGCGAGCGGCCGTGGTTCGGGCGCGGGCCGGGCACCTTCATCCCGGCGAAGTACTTCTTCCTCGACAA
CCAGTACCTCGGGACCATCCTCACCTCCGGATACGTGGGTCTGGCCGCGCTCGTCATCGTCATGCTCGGCGGGATCACGA
TGGCGTTCGGGGTGGCCCGGCGCGCCGCCGACGCGGCGACCCGAGAACTGGCCCAGGCCCTCGCCGCGATGCTCGTCGCC
GTCGCGGCGGCCTCGTACAGCTTCGACTCACTGTCGTTCCCGGCCTTCGCCGGCCTGTTCTACCTGACGCTGGGTGTCAC
CGGCGCGTTGTGGCGACTCGAACAGCGGCCCGTGCCCACACCGGCCGGGCCTGCCGCGGCGGCACCCGTCCAGTGGCGGG
ACCCGCGCGGTGACCAGCCAAGCGTGGCGGAGCTGGTCCCGGCGGCCCGGCAGCCCGCCGGCATCGCGTGA

Upstream 100 bases:

>100_bases
AGACCGCGGCGGTCAATGAGGACACGGTGACCATTCGGACGGGCAGCCGACTCGGGGCGGGGCCCGTCCCGCCGGACCTC
GACCGAAGCGGCCGCCCGCG

Downstream 100 bases:

>100_bases
ACCAGCGCCGCGAGGGCCGGCCGCGGGTACGCCGGCCCTCGCGGGTGCCGGTCTCACGTCGCCTCGCCGGCCCTCGCTGA
CGTCGCCCTAGCGTGGCCTT

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase Family Protein

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MTLPGRAALRTVAALPIARWRPDAVSVLTLLGVLLFVIPARNTLQSLGAAGRPVFLLGLVLACAWLCTWLHPGLVRRGRQ
PVRGLLLIYLGALLAAYVAGQRRGLDGVEARASDRSILAVLALVGIALAAADGIPSRARLEVLISRIMCFGAVMALFGIV
QYLTHEDYSRYLRLPGFVMWSPALESVSRGGGTSRVAGTASHYIEFGVVVAMVVPLALYRTSHAVTKGARQRAAGALVLT
AAAAPLSVSRTAIIGLGCVLLVQSIVWSWRRRFNVFVWLVIGVGAFGAAVPGVLGTLRSLFLNYKTDPSYQGRIADYAVA
QAYISERPWFGRGPGTFIPAKYFFLDNQYLGTILTSGYVGLAALVIVMLGGITMAFGVARRAADAATRELAQALAAMLVA
VAAASYSFDSLSFPAFAGLFYLTLGVTGALWRLEQRPVPTPAGPAAAAPVQWRDPRGDQPSVAELVPAARQPAGIA

Sequences:

>Translated_476_residues
MTLPGRAALRTVAALPIARWRPDAVSVLTLLGVLLFVIPARNTLQSLGAAGRPVFLLGLVLACAWLCTWLHPGLVRRGRQ
PVRGLLLIYLGALLAAYVAGQRRGLDGVEARASDRSILAVLALVGIALAAADGIPSRARLEVLISRIMCFGAVMALFGIV
QYLTHEDYSRYLRLPGFVMWSPALESVSRGGGTSRVAGTASHYIEFGVVVAMVVPLALYRTSHAVTKGARQRAAGALVLT
AAAAPLSVSRTAIIGLGCVLLVQSIVWSWRRRFNVFVWLVIGVGAFGAAVPGVLGTLRSLFLNYKTDPSYQGRIADYAVA
QAYISERPWFGRGPGTFIPAKYFFLDNQYLGTILTSGYVGLAALVIVMLGGITMAFGVARRAADAATRELAQALAAMLVA
VAAASYSFDSLSFPAFAGLFYLTLGVTGALWRLEQRPVPTPAGPAAAAPVQWRDPRGDQPSVAELVPAARQPAGIA
>Mature_475_residues
TLPGRAALRTVAALPIARWRPDAVSVLTLLGVLLFVIPARNTLQSLGAAGRPVFLLGLVLACAWLCTWLHPGLVRRGRQP
VRGLLLIYLGALLAAYVAGQRRGLDGVEARASDRSILAVLALVGIALAAADGIPSRARLEVLISRIMCFGAVMALFGIVQ
YLTHEDYSRYLRLPGFVMWSPALESVSRGGGTSRVAGTASHYIEFGVVVAMVVPLALYRTSHAVTKGARQRAAGALVLTA
AAAPLSVSRTAIIGLGCVLLVQSIVWSWRRRFNVFVWLVIGVGAFGAAVPGVLGTLRSLFLNYKTDPSYQGRIADYAVAQ
AYISERPWFGRGPGTFIPAKYFFLDNQYLGTILTSGYVGLAALVIVMLGGITMAFGVARRAADAATRELAQALAAMLVAV
AAASYSFDSLSFPAFAGLFYLTLGVTGALWRLEQRPVPTPAGPAAAAPVQWRDPRGDQPSVAELVPAARQPAGIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50437; Mature: 50306

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPGRAALRTVAALPIARWRPDAVSVLTLLGVLLFVIPARNTLQSLGAAGRPVFLLGLV
CCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHH
LACAWLCTWLHPGLVRRGRQPVRGLLLIYLGALLAAYVAGQRRGLDGVEARASDRSILAV
HHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHH
LALVGIALAAADGIPSRARLEVLISRIMCFGAVMALFGIVQYLTHEDYSRYLRLPGFVMW
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SPALESVSRGGGTSRVAGTASHYIEFGVVVAMVVPLALYRTSHAVTKGARQRAAGALVLT
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
AAAAPLSVSRTAIIGLGCVLLVQSIVWSWRRRFNVFVWLVIGVGAFGAAVPGVLGTLRSL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLNYKTDPSYQGRIADYAVAQAYISERPWFGRGPGTFIPAKYFFLDNQYLGTILTSGYVG
HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCHHH
LAALVIVMLGGITMAFGVARRAADAATRELAQALAAMLVAVAAASYSFDSLSFPAFAGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YLTLGVTGALWRLEQRPVPTPAGPAAAAPVQWRDPRGDQPSVAELVPAARQPAGIA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TLPGRAALRTVAALPIARWRPDAVSVLTLLGVLLFVIPARNTLQSLGAAGRPVFLLGLV
CCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHH
LACAWLCTWLHPGLVRRGRQPVRGLLLIYLGALLAAYVAGQRRGLDGVEARASDRSILAV
HHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHH
LALVGIALAAADGIPSRARLEVLISRIMCFGAVMALFGIVQYLTHEDYSRYLRLPGFVMW
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SPALESVSRGGGTSRVAGTASHYIEFGVVVAMVVPLALYRTSHAVTKGARQRAAGALVLT
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
AAAAPLSVSRTAIIGLGCVLLVQSIVWSWRRRFNVFVWLVIGVGAFGAAVPGVLGTLRSL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLNYKTDPSYQGRIADYAVAQAYISERPWFGRGPGTFIPAKYFFLDNQYLGTILTSGYVG
HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCHHH
LAALVIVMLGGITMAFGVARRAADAATRELAQALAAMLVAVAAASYSFDSLSFPAFAGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YLTLGVTGALWRLEQRPVPTPAGPAAAAPVQWRDPRGDQPSVAELVPAARQPAGIA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA