| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312589
Identifier: 158312589
GI number: 158312589
Start: 852798
End: 854588
Strand: Direct
Name: 158312589
Synonym: Franean1_0733
Alternate gene names: NA
Gene position: 852798-854588 (Clockwise)
Preceding gene: 158312588
Following gene: 158312597
Centisome position: 9.49
GC content: 70.58
Gene sequence:
>1791_bases ATGATCAAAATCGGAAGCCCGCCGGCCGAGCGGTCGGTCAACCTGCCCTACTGGACGAAGGGCGACACCAACGCGTTCTT CGGCCTGGGCATCAACGTCCTGGTCAACGTCATCGTCCTGACATCGCTGTGCCTGTTCGTGGTGAACATCCCCAAGGGGG ACGTGTTCGGCGCGATCCTGCCCGCGCTGGGCATCGCGATGCTGCTCGGCAACTTCTTCTACGCCTGGCTCGGCCGCCGG CTGGCCCTCAAGGAGGGCCGTGGCGACGTCACGGCCATGCCGTACGGGCCGAGCGTTCCGCACATGTTCATCGTCGTCTT CGTGATCATGTTGCCGATCTACCTGCAGACGAAGGACCCGGTGGCCGCCTGGCAGGCGGGCCTCGCCTGGGCGTTCATCA TCGGGATCATCGTCATGATCGGCGCCTTCGTCGGCCCGACGATCCGCCGCTACGCCCCGCGCGCGGCCATGCTCGGCACG CTCGCCGGCATCTCCATCGCGTTCATCTCGATGCGGCCGGCCGCGCAGATGTGGGACGCCGCCTGGATCGCGCTGCCGGT CTTCGGCCTGCTGCTCATCGGGCTGCTCACCGACCTGAAGCTGCCGTGGAACCTGCCGATCGGCGCGGTCGCGCTGCTGC TGGGGACGGCGATCGGCTGGATCGGCGGCTTCATGGACGCCCCCGCGGTCGGCGACGCGGCGAAGGACATCGCTGTCTCG CTGCCGACGTTCCACTTCGACAAGCTGATCGACGGCCTGTCCGACATCTCGCCGCTGCTCGCCACGGCCATCCCGCTTGG GGTCTACAACTTCACCGAGGGCATGACCAACGTGGAGAGTGCCGCGTCCGCCGGGGACAGCTACAACCTGCGGCCGATCC TGCTCGCCGACGGCCTCGGCGCGGTCGTCGGCGCGGCGCTGGGCTCCCCGTTCCCGCCCGCGGTCTACATCGGCCATCCC GGCTGGAAGGCGGCCGGCGGCCGGACGGGGTACTCGCTGGCGACCGGCGCCGTCATCGCGCTGCTGTGCTTCCTGGGGAT GTTCAGCCTGCTCAACGCGGTGCTCCCGCTGCCGGCGATCGTGCCGATCCTGCTCTACATCGGGCTGCTGATCGGTGCGC AGGCCTTCCAGGTGTCACCGAAGGCGCACGGCGCCGCGGTGGTGGCGGCGATCATCCCGAACATCGCGTCCTGGGCGGCG GGGCTCATCGACAACACGGTGACCACCGCGGTCGGCGTGGCGTCCAACCTCAACCCGTCGGTCCAGCTCACCGTCACCGA CGACGATCTCGAGGCGAACAGCGTGCTGCTGCACGGGCTGCACGTCCTCGGCGACGGGGCCGTCCTCGCCGGTCTGGTCC TGGGCACGATCGTGGCGTTCATCATCGACAAGCGGTTCGTCCACGCGACGATCGCGTCCGCGGCCGGCGCGGTGCTGGCG TTCGTCGGCCTGATCCACGGCGAGAAGGTGGAGTGGAACGCCAGCGGCCAGGTCGCGCTGGGCTATCTGTTCCTCGCGGT GGTCTGCGCGATCTGGGCCCTGACGAAGCCCGCGCCGCGGGTGCCCGACGCCGAGGAGATCGAGCTGGAACGGGTGCACG GCGTGCCCCCGCAGCGCTCCCGCAGCGACGCCGCGCCGGCAGCCGTGCCGGAACCCGTGCCGACGGCGGTGCCGGCGGCC GTGAACGGCGGGCGACCGGGCGCGGACGAGCCGTCCTCGGCTGAGCCCGCCACGGCTCAGCCCGCCACGGCTCAGCCCGC GGCCGGGAAGCCGGCAGCAGCGACGTCCTGA
Upstream 100 bases:
>100_bases CCTCCGAGCAGTTCCTCGACGCCCTCGCGGTTCTGGGCGCCTCCGCCGTCGCCTCGTCCGCCGTCGCCGCGTCCTGAATC CCAGGGAGACCGTACCCGTC
Downstream 100 bases:
>100_bases CTGCCGGGCGCCCCCTGCCACCTGGCCCGGCCGGCCAGCGTGGCCGGGGGTGTCGGCGGCCGGGGTGTCAGCGGCCGGAT CGCCCGGCGGGCGTGCTGAG
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: Permease; MFS Transporter Xanthine/Uracil Permease; Permease Subfamily Putative; Sulphate Transporter; Regulator; Transcriptional Regulator; Permease Subfamily
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MIKIGSPPAERSVNLPYWTKGDTNAFFGLGINVLVNVIVLTSLCLFVVNIPKGDVFGAILPALGIAMLLGNFFYAWLGRR LALKEGRGDVTAMPYGPSVPHMFIVVFVIMLPIYLQTKDPVAAWQAGLAWAFIIGIIVMIGAFVGPTIRRYAPRAAMLGT LAGISIAFISMRPAAQMWDAAWIALPVFGLLLIGLLTDLKLPWNLPIGAVALLLGTAIGWIGGFMDAPAVGDAAKDIAVS LPTFHFDKLIDGLSDISPLLATAIPLGVYNFTEGMTNVESAASAGDSYNLRPILLADGLGAVVGAALGSPFPPAVYIGHP GWKAAGGRTGYSLATGAVIALLCFLGMFSLLNAVLPLPAIVPILLYIGLLIGAQAFQVSPKAHGAAVVAAIIPNIASWAA GLIDNTVTTAVGVASNLNPSVQLTVTDDDLEANSVLLHGLHVLGDGAVLAGLVLGTIVAFIIDKRFVHATIASAAGAVLA FVGLIHGEKVEWNASGQVALGYLFLAVVCAIWALTKPAPRVPDAEEIELERVHGVPPQRSRSDAAPAAVPEPVPTAVPAA VNGGRPGADEPSSAEPATAQPATAQPAAGKPAAATS
Sequences:
>Translated_596_residues MIKIGSPPAERSVNLPYWTKGDTNAFFGLGINVLVNVIVLTSLCLFVVNIPKGDVFGAILPALGIAMLLGNFFYAWLGRR LALKEGRGDVTAMPYGPSVPHMFIVVFVIMLPIYLQTKDPVAAWQAGLAWAFIIGIIVMIGAFVGPTIRRYAPRAAMLGT LAGISIAFISMRPAAQMWDAAWIALPVFGLLLIGLLTDLKLPWNLPIGAVALLLGTAIGWIGGFMDAPAVGDAAKDIAVS LPTFHFDKLIDGLSDISPLLATAIPLGVYNFTEGMTNVESAASAGDSYNLRPILLADGLGAVVGAALGSPFPPAVYIGHP GWKAAGGRTGYSLATGAVIALLCFLGMFSLLNAVLPLPAIVPILLYIGLLIGAQAFQVSPKAHGAAVVAAIIPNIASWAA GLIDNTVTTAVGVASNLNPSVQLTVTDDDLEANSVLLHGLHVLGDGAVLAGLVLGTIVAFIIDKRFVHATIASAAGAVLA FVGLIHGEKVEWNASGQVALGYLFLAVVCAIWALTKPAPRVPDAEEIELERVHGVPPQRSRSDAAPAAVPEPVPTAVPAA VNGGRPGADEPSSAEPATAQPATAQPAAGKPAAATS >Mature_596_residues MIKIGSPPAERSVNLPYWTKGDTNAFFGLGINVLVNVIVLTSLCLFVVNIPKGDVFGAILPALGIAMLLGNFFYAWLGRR LALKEGRGDVTAMPYGPSVPHMFIVVFVIMLPIYLQTKDPVAAWQAGLAWAFIIGIIVMIGAFVGPTIRRYAPRAAMLGT LAGISIAFISMRPAAQMWDAAWIALPVFGLLLIGLLTDLKLPWNLPIGAVALLLGTAIGWIGGFMDAPAVGDAAKDIAVS LPTFHFDKLIDGLSDISPLLATAIPLGVYNFTEGMTNVESAASAGDSYNLRPILLADGLGAVVGAALGSPFPPAVYIGHP GWKAAGGRTGYSLATGAVIALLCFLGMFSLLNAVLPLPAIVPILLYIGLLIGAQAFQVSPKAHGAAVVAAIIPNIASWAA GLIDNTVTTAVGVASNLNPSVQLTVTDDDLEANSVLLHGLHVLGDGAVLAGLVLGTIVAFIIDKRFVHATIASAAGAVLA FVGLIHGEKVEWNASGQVALGYLFLAVVCAIWALTKPAPRVPDAEEIELERVHGVPPQRSRSDAAPAAVPEPVPTAVPAA VNGGRPGADEPSSAEPATAQPATAQPAAGKPAAATS
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61423; Mature: 61423
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIGSPPAERSVNLPYWTKGDTNAFFGLGINVLVNVIVLTSLCLFVVNIPKGDVFGAIL CCCCCCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH PALGIAMLLGNFFYAWLGRRLALKEGRGDVTAMPYGPSVPHMFIVVFVIMLPIYLQTKDP HHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC VAAWQAGLAWAFIIGIIVMIGAFVGPTIRRYAPRAAMLGTLAGISIAFISMRPAAQMWDA HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHEEECCCHHHHHHH AWIALPVFGLLLIGLLTDLKLPWNLPIGAVALLLGTAIGWIGGFMDAPAVGDAAKDIAVS HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEE LPTFHFDKLIDGLSDISPLLATAIPLGVYNFTEGMTNVESAASAGDSYNLRPILLADGLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEECCHH AVVGAALGSPFPPAVYIGHPGWKAAGGRTGYSLATGAVIALLCFLGMFSLLNAVLPLPAI HHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH VPILLYIGLLIGAQAFQVSPKAHGAAVVAAIIPNIASWAAGLIDNTVTTAVGVASNLNPS HHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VQLTVTDDDLEANSVLLHGLHVLGDGAVLAGLVLGTIVAFIIDKRFVHATIASAAGAVLA EEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGLIHGEKVEWNASGQVALGYLFLAVVCAIWALTKPAPRVPDAEEIELERVHGVPPQRS HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCC RSDAAPAAVPEPVPTAVPAAVNGGRPGADEPSSAEPATAQPATAQPAAGKPAAATS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIKIGSPPAERSVNLPYWTKGDTNAFFGLGINVLVNVIVLTSLCLFVVNIPKGDVFGAIL CCCCCCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH PALGIAMLLGNFFYAWLGRRLALKEGRGDVTAMPYGPSVPHMFIVVFVIMLPIYLQTKDP HHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC VAAWQAGLAWAFIIGIIVMIGAFVGPTIRRYAPRAAMLGTLAGISIAFISMRPAAQMWDA HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHEEECCCHHHHHHH AWIALPVFGLLLIGLLTDLKLPWNLPIGAVALLLGTAIGWIGGFMDAPAVGDAAKDIAVS HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEE LPTFHFDKLIDGLSDISPLLATAIPLGVYNFTEGMTNVESAASAGDSYNLRPILLADGLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEEEECCHH AVVGAALGSPFPPAVYIGHPGWKAAGGRTGYSLATGAVIALLCFLGMFSLLNAVLPLPAI HHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH VPILLYIGLLIGAQAFQVSPKAHGAAVVAAIIPNIASWAAGLIDNTVTTAVGVASNLNPS HHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VQLTVTDDDLEANSVLLHGLHVLGDGAVLAGLVLGTIVAFIIDKRFVHATIASAAGAVLA EEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGLIHGEKVEWNASGQVALGYLFLAVVCAIWALTKPAPRVPDAEEIELERVHGVPPQRS HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCC RSDAAPAAVPEPVPTAVPAAVNGGRPGADEPSSAEPATAQPATAQPAAGKPAAATS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA