| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312597
Identifier: 158312597
GI number: 158312597
Start: 864694
End: 866037
Strand: Direct
Name: 158312597
Synonym: Franean1_0741
Alternate gene names: NA
Gene position: 864694-866037 (Clockwise)
Preceding gene: 158312589
Following gene: 158312600
Centisome position: 9.63
GC content: 77.6
Gene sequence:
>1344_bases GTGGAGGGTCTCGGGTGCCCGGTGCCTGGGCGGGCGCCCTACGATCGCGCCATGACCGAGCAGCTGCCGACCATCGCGGA CGGTCGAGCCAGCCTTGTCATGTTCGCCCGTGGCGACCGGGTTTTCCCGGTGGACGATCTTGGTGGCGGGGTGTGGTCTC GTCGTGGCACGGTGCTGTCCGTGCATCCGGCGTCACACGAGGAGGCGCAGCCGGTCGGGGGCGGCGTCCGGGTCGATGCG GTGCCCTCGGCCGCGCCGTCGACCGCCCGGGCGACGGTGCTGTGGGACGACGGCTCCGCGGAGGTCCTCGCCGAGGACAA GCTCTGCCTGGTCTACGACCAGGAGGCCCCGGTGGGCATCCGGGTGGTCACGATGGAGATGAGCCAGCCCTTCGACGTCG TCGACCACGGCGGCCACGTCGTCCTGGTGCTGCGGGAGGGGCTGCTGGCCGCGGCGGACGTCGGCGCGCTGCGTGCCCGG CTTGGCCGGGTGCGCGCGGCGCTGGCCCCGGGCCACGGCGACGCCGCGTCGGCGGCGGAGATACGCCGCCGCGACCTGAG CCTGCTGAACGCGCTGATAGCCGAGCTCACCGGCCCGCCGCCGGACGACGTCCCGCACCCGGACACCGCGCGCCTGGATC CCGCGGGCCCGGACGCCGCGCGCCGCGATGCCGCCGCCCGTCTGGACGCCGCCCGCCGGGACATCGCGCGCCTCGACGCG GCCCGCCTGGATGCCGCCCGTGCCGATGCCGGGGGCGCGCGCAGCGCCGGGCGTACCGACGTGGCCGCCGGGCGTTCCGA GGTCGCTGTCGGGCGGGCCGATGTGGCTGTGGGGCGGCCCGCGGCTCCCGTGGGCGTTCCCGGCGGCGCGGCCGGGCTGC CCGCCGGTGGACGTCCGCCGGCGGCGCGGCGCCAGGACGTGACGGTCGGGAGCCCTGGTGGGGACCGGCCGGTCGCCGAG GTGGGACGCCCGGCGGACCCGGCTCGGCGCGAGGCGCCGCGGCCCGATGTCTTCGTCGGGCGCGCCGATCCGGCGCGGTC CGACGTCGGCCGGTCTGGCCCTGGGCGTTCGGACCTCGACCGCTCGGATCCTGACCGCTCGGACCTCGGCCGATCGGAGG CGGCGCGCCTGGAGATGGCGAGGGCCGAAACGCTGCGGGCAGAGATGCGGCGAGCCGAAATACAGCGGGCCGAAGCGATG CGGGCTGAAGCCGCCCGCGCCGAAGCAGCCCGCGCCGACGCCGTGCGGGCTGATCGGGTACGTCCCGACGTGGTGGTGGG AACCCCCGGCCGGCCGGGCGTGGGGCCGCCCGCCGGACCGCCGTCGGGGTACCCGCTGCGGTGA
Upstream 100 bases:
>100_bases CCGGGCGGGTGGCCCGGGGCGGAAGTCCCTGTTCTGACGGTGAAGTCGCCGCTGCGGCGACCGTCGCGGGACGGGGGCGC GGCGGAGGGCCCGGCGGTCT
Downstream 100 bases:
>100_bases CGGACGGCGCCGGCTGGCCGGGGCCGCCTAAGGTTTCGCCGGGACGCTGCCCGGTGGGGACTCAGGAGGTCGAGTACGGC CCCGGACGCACACCCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MEGLGCPVPGRAPYDRAMTEQLPTIADGRASLVMFARGDRVFPVDDLGGGVWSRRGTVLSVHPASHEEAQPVGGGVRVDA VPSAAPSTARATVLWDDGSAEVLAEDKLCLVYDQEAPVGIRVVTMEMSQPFDVVDHGGHVVLVLREGLLAAADVGALRAR LGRVRAALAPGHGDAASAAEIRRRDLSLLNALIAELTGPPPDDVPHPDTARLDPAGPDAARRDAAARLDAARRDIARLDA ARLDAARADAGGARSAGRTDVAAGRSEVAVGRADVAVGRPAAPVGVPGGAAGLPAGGRPPAARRQDVTVGSPGGDRPVAE VGRPADPARREAPRPDVFVGRADPARSDVGRSGPGRSDLDRSDPDRSDLGRSEAARLEMARAETLRAEMRRAEIQRAEAM RAEAARAEAARADAVRADRVRPDVVVGTPGRPGVGPPAGPPSGYPLR
Sequences:
>Translated_447_residues MEGLGCPVPGRAPYDRAMTEQLPTIADGRASLVMFARGDRVFPVDDLGGGVWSRRGTVLSVHPASHEEAQPVGGGVRVDA VPSAAPSTARATVLWDDGSAEVLAEDKLCLVYDQEAPVGIRVVTMEMSQPFDVVDHGGHVVLVLREGLLAAADVGALRAR LGRVRAALAPGHGDAASAAEIRRRDLSLLNALIAELTGPPPDDVPHPDTARLDPAGPDAARRDAAARLDAARRDIARLDA ARLDAARADAGGARSAGRTDVAAGRSEVAVGRADVAVGRPAAPVGVPGGAAGLPAGGRPPAARRQDVTVGSPGGDRPVAE VGRPADPARREAPRPDVFVGRADPARSDVGRSGPGRSDLDRSDPDRSDLGRSEAARLEMARAETLRAEMRRAEIQRAEAM RAEAARAEAARADAVRADRVRPDVVVGTPGRPGVGPPAGPPSGYPLR >Mature_447_residues MEGLGCPVPGRAPYDRAMTEQLPTIADGRASLVMFARGDRVFPVDDLGGGVWSRRGTVLSVHPASHEEAQPVGGGVRVDA VPSAAPSTARATVLWDDGSAEVLAEDKLCLVYDQEAPVGIRVVTMEMSQPFDVVDHGGHVVLVLREGLLAAADVGALRAR LGRVRAALAPGHGDAASAAEIRRRDLSLLNALIAELTGPPPDDVPHPDTARLDPAGPDAARRDAAARLDAARRDIARLDA ARLDAARADAGGARSAGRTDVAAGRSEVAVGRADVAVGRPAAPVGVPGGAAGLPAGGRPPAARRQDVTVGSPGGDRPVAE VGRPADPARREAPRPDVFVGRADPARSDVGRSGPGRSDLDRSDPDRSDLGRSEAARLEMARAETLRAEMRRAEIQRAEAM RAEAARAEAARADAVRADRVRPDVVVGTPGRPGVGPPAGPPSGYPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46194; Mature: 46194
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGLGCPVPGRAPYDRAMTEQLPTIADGRASLVMFARGDRVFPVDDLGGGVWSRRGTVLS CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCEEEEHHHCCCCHHHCCCCEEE VHPASHEEAQPVGGGVRVDAVPSAAPSTARATVLWDDGSAEVLAEDKLCLVYDQEAPVGI ECCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCCCCEE RVVTMEMSQPFDVVDHGGHVVLVLREGLLAAADVGALRARLGRVRAALAPGHGDAASAAE EEEEEECCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IRRRDLSLLNALIAELTGPPPDDVPHPDTARLDPAGPDAARRDAAARLDAARRDIARLDA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARLDAARADAGGARSAGRTDVAAGRSEVAVGRADVAVGRPAAPVGVPGGAAGLPAGGRPP HHHHHHHCCCCCCCCCCCCHHHCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCC AARRQDVTVGSPGGDRPVAEVGRPADPARREAPRPDVFVGRADPARSDVGRSGPGRSDLD CCCCCCCEECCCCCCCCHHHCCCCCCHHHHCCCCCCEEEECCCCCHHHCCCCCCCCCCCC RSDPDRSDLGRSEAARLEMARAETLRAEMRRAEIQRAEAMRAEAARAEAARADAVRADRV CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPDVVVGTPGRPGVGPPAGPPSGYPLR CCCEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEGLGCPVPGRAPYDRAMTEQLPTIADGRASLVMFARGDRVFPVDDLGGGVWSRRGTVLS CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCEEEEHHHCCCCHHHCCCCEEE VHPASHEEAQPVGGGVRVDAVPSAAPSTARATVLWDDGSAEVLAEDKLCLVYDQEAPVGI ECCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCCCCEE RVVTMEMSQPFDVVDHGGHVVLVLREGLLAAADVGALRARLGRVRAALAPGHGDAASAAE EEEEEECCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IRRRDLSLLNALIAELTGPPPDDVPHPDTARLDPAGPDAARRDAAARLDAARRDIARLDA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARLDAARADAGGARSAGRTDVAAGRSEVAVGRADVAVGRPAAPVGVPGGAAGLPAGGRPP HHHHHHHCCCCCCCCCCCCHHHCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCC AARRQDVTVGSPGGDRPVAEVGRPADPARREAPRPDVFVGRADPARSDVGRSGPGRSDLD CCCCCCCEECCCCCCCCHHHCCCCCCHHHHCCCCCCEEEECCCCCHHHCCCCCCCCCCCC RSDPDRSDLGRSEAARLEMARAETLRAEMRRAEIQRAEAMRAEAARAEAARADAVRADRV CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPDVVVGTPGRPGVGPPAGPPSGYPLR CCCEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA