| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312584
Identifier: 158312584
GI number: 158312584
Start: 845930
End: 846451
Strand: Direct
Name: 158312584
Synonym: Franean1_0728
Alternate gene names: NA
Gene position: 845930-846451 (Clockwise)
Preceding gene: 158312583
Following gene: 158312587
Centisome position: 9.42
GC content: 74.14
Gene sequence:
>522_bases GTGACCGGGGAGCGGAGTGAAGTGAGAGGAGCGCCTGCACAGATGGCCGTCGTGGGGATCACCGGGCACCGCGTCCTGTC GCCGGAGGTCGAGACGTTCACGACCGCCGAGATGCGCCGCCTGCTGGGCCGGCACCGGGCCGCTGAGCTGGTCGGTGTGA GCTGCCTCGCCGAGGGCGCCGACAGCGTCTTCGCCGACCTGGTGCTCGGCCTCGGGGGCCGGCTTGTGGCCGTCCTGCCC GCGCGGGACTACCGGGAGTTCCTCCCGCCGGAGCACCGAGCGGACTACGACCGCCTGCGCGCCGCCGCCACGCGCGTGCG CACACTGCCGGAGCCCGAGGTGGACCTGGCGGCGCTGATGACAGCCAGCGAGGCCCTGGTCGACGAGGTGGACGAGCTGA TCGCCGTCTGGGACGGCCAGCCCGCCCGCGACTACGCCGGCACCGCGGACGTCGTCGCGTACGCGCGAAGCCAGCACAAG CCGGTCCACGTTGTGTGGCCCGCGGGCGCCGTCCGGGACTAG
Upstream 100 bases:
>100_bases ATGGCATCGAGGTCGAGCCGCGGGGCTCGCTGGCCGGCGCCCTCGCCCGCGAGCTCGGGTCGCGCTCGGTGAGCGGAACG TCCAGCGAGCGCAGCGCAGT
Downstream 100 bases:
>100_bases TCGCCGCAGCAGACATCCGCCCTGGCCACGCCGGCGCGGCGATTCCTGCGGGTCAGCGCGGGGACAGCGGGACCACGCCG ATCTGGACGGGGGTGAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTGERSEVRGAPAQMAVVGITGHRVLSPEVETFTTAEMRRLLGRHRAAELVGVSCLAEGADSVFADLVLGLGGRLVAVLP ARDYREFLPPEHRADYDRLRAAATRVRTLPEPEVDLAALMTASEALVDEVDELIAVWDGQPARDYAGTADVVAYARSQHK PVHVVWPAGAVRD
Sequences:
>Translated_173_residues MTGERSEVRGAPAQMAVVGITGHRVLSPEVETFTTAEMRRLLGRHRAAELVGVSCLAEGADSVFADLVLGLGGRLVAVLP ARDYREFLPPEHRADYDRLRAAATRVRTLPEPEVDLAALMTASEALVDEVDELIAVWDGQPARDYAGTADVVAYARSQHK PVHVVWPAGAVRD >Mature_172_residues TGERSEVRGAPAQMAVVGITGHRVLSPEVETFTTAEMRRLLGRHRAAELVGVSCLAEGADSVFADLVLGLGGRLVAVLPA RDYREFLPPEHRADYDRLRAAATRVRTLPEPEVDLAALMTASEALVDEVDELIAVWDGQPARDYAGTADVVAYARSQHKP VHVVWPAGAVRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18706; Mature: 18575
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGERSEVRGAPAQMAVVGITGHRVLSPEVETFTTAEMRRLLGRHRAAELVGVSCLAEGA CCCCCCHHCCCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSVFADLVLGLGGRLVAVLPARDYREFLPPEHRADYDRLRAAATRVRTLPEPEVDLAALM HHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH TASEALVDEVDELIAVWDGQPARDYAGTADVVAYARSQHKPVHVVWPAGAVRD HHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure TGERSEVRGAPAQMAVVGITGHRVLSPEVETFTTAEMRRLLGRHRAAELVGVSCLAEGA CCCCCHHCCCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSVFADLVLGLGGRLVAVLPARDYREFLPPEHRADYDRLRAAATRVRTLPEPEVDLAALM HHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH TASEALVDEVDELIAVWDGQPARDYAGTADVVAYARSQHKPVHVVWPAGAVRD HHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA