| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cmcT [H]
Identifier: 158312587
GI number: 158312587
Start: 849344
End: 851635
Strand: Direct
Name: cmcT [H]
Synonym: Franean1_0731
Alternate gene names: 158312587
Gene position: 849344-851635 (Clockwise)
Preceding gene: 158312584
Following gene: 158312588
Centisome position: 9.46
GC content: 72.08
Gene sequence:
>2292_bases ATGGCGAAGAGCAGGGGCAAGCCGAGAGCGAGGTCCGCGGGATCCGGGGGTGCAGGGGCGCCCGCGCGCAGGGGGACCGG CCCGGCAACGCCGGCCGCGGCGAGCGAGGCGGCGACATCCGAAGCCATACCCGAAGCCACGGCGGATGCCGCCGGAGGCG CTGGCGACCTCGGACCCACCGGCGGCAACGGCGCCGAGGCTGACGTTGCTGCTGAGGCTGCTGACGTTGCGGCTGGTGAG GTTGCCGCTGACGAGATTGCAGGCGGCGAGGCTGCTGACGGCGAGGCTGGCGATGCGGCGGCTGCGGGCGCCGGGGTGGC GCACGAAGAGGCTGACCGCGAAGAGGCTGACGTGGTGGCCCCGGCCGGCGAGGTGTCTGCCGAAGAGGCTGGGGTGGCGG CCGGGACGGTGGCTACCGGCGAGGCGGTGGCCGAGAAGGCCGAAGCGGTGGCCGCTGGCGCGGGCGTGGCCGAGGAGATG GCTGAGCGGCAGAGCCTGCCAGCCGAGACCAAGCCCGAGGTCGTGGTCGTGCCCGAGGGTGAGGCCAAGCCCGAGGTTGC AGCTGAGCCCGAGGTTGAGGCCAAGGTCGGATCCGAAACCGAGGTCGGATCCGGCGTCGAGGCGCAGGCCGCGGTCGCGG ATGAGAACGCGCTGGTCTCGGCGGAGCCGGAGGCCGGTGCGGAGCCGGTCGAGATCGTCATTCCTGAGCAGGTGACCGCT GCCGCGAGCATGGTCGCGCCGGCCGGAGCCGCGGAGAAGGAGACGGTCGCGCCGGGCCAGGTCGCCGCGGAGAAGACCGA GGAGAAGACGGCCGCCCCGGCCGGCCGGGGTCGGCGGGTGCCGGCCTGGGCGGTGCTGGCCGTGTGCTGCTTCGCCCAGT TCATGGTCGTCCTGGACGTCTCGATCGTGAACGTCGCGCTGCCGTCCATGCAGACCGAACTGGGTCTGAGCTCGTCCGGT CTGCAGTGGGTGGTCAACTCCTACACGCTGGCCTTCGCCGGGCTGCTGCTGTTCGGTGGGCGGGCGGCGGACCTGTTCGG GCGGCGCCGGGTGTTCATCACCGGGCTCACCCTGTTCACCGCGGCGAGTCTTGCCGGCGGGCTCGCCAACGACCAGACGA TGCTGATCGTCGCCCGCGCCGTGCAGGGGCTCGGTGGCGCGGTGCTCGCGCCCGCGACGCTGAGCATGCTGATGACCTCC TTCCCGGATCCGCGTGAGCGTGCCCGGGCGCTCGGAATGTGGGGTGCGACCGCCGCCGGTGGAGGTGCGATGGGCGCGCT CGCCGGAGGTGTGCTGACCGAGATCGCCGACTGGCGCTGGGTGCTGTTCGTCAACGTGCCGATCGGACTGGTGCTGATCG TTGGCGCGCGGGCGGCGTTGATCGAATCCCGCGGTCAGGCTCGCGGAGTGCGCGATCTCGACATTCCCGGCACTGTCACC GTCACGGCCGGGCTGACGGCGCTGGTCTACGGCATCGTGCGGACGGAGTCCAGCAGTTGGGGCTCGCCGGTGACCATCGC GTGGCTGGCCGGCGCGGTCGTGTTGCTCGCGGCCTTCCTGATCATCGAGTCGCGTACCGCGAACCCACTGGTGCCACTGG CCATCTTCCGGCGCCGGGCGCTGCGGTACGCGAACACGATCGGCGTGGTGATGGGCTCGATCATGTTCGGGCTGTTCTTC TTCCTGACCCTGTACCTGCAGCAGGTCAAGGGCCAGGGGCCGCTCGAGGCCGGCCTGGCGCTGGTGCCCATGCCGATTAT GATCATTGTCGGGTCGCAGGTCAGTTCCCGGACGGTCGGCCGGTTCGGCCCCCGTCCGCTGATCATCGGCGCGTCGGTGA TCGTGGCGTCGAGCGTCGGCTGGCTCAGTGCCCTGAGCGCGCACGGCTCCTACTGGGCCGAGGTTTTCGGGCCGCTCGCG CTGCTGGGCTTCGGGATGGGCATCAACATGGTCGCGGTGACGACCGCCGCCACCGCCGGTGTGCCGCCGCAGTTGGCCGG GCTGGCGTCCGGTCTACTCAACACCGCGCGGCAGATCGGCGCCGCCGTCGGCCTGGCCGTCCTGGCGATCATCGCGGACA CGCACACCGACAACGAGCTGGCCGCGGGAGCGGACCGGGCCGACGCGCTGACCTCGGGGTACTCGCTGGGATTCCTGGTG TGCGCGGCGCTCATGCTCGGGGCCGCCGTGCTGGCGGTGTTCATGCCGCGCAAGGAGGTGCTCGTCGCCCAGGCGGGTGC CGCCCAGGCCCGCCCGGAACCGGAGCGGGTGGAGGCGCTCGCCGAAGCCTGA
Upstream 100 bases:
>100_bases CGACGTAGGGTCGGTCGGACGTCCGTACGGTGTACGGGGACCTGGTCGCGGGCCGGCGCGGCCGCCAGATCGACGACCGG TGCGGCTGTGGGAGGACGCG
Downstream 100 bases:
>100_bases CCGCCTGCCGGGGCGGAAGGCGGCCGCCCGTCCCGAGATCCGGTGCCGTGTCCTGAGAATCGAATAGCCAGAACCGCGAC CCGTCACCAATGGTGACGGG
Product: EmrB/QacA family drug resistance transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MAKSRGKPRARSAGSGGAGAPARRGTGPATPAAASEAATSEAIPEATADAAGGAGDLGPTGGNGAEADVAAEAADVAAGE VAADEIAGGEAADGEAGDAAAAGAGVAHEEADREEADVVAPAGEVSAEEAGVAAGTVATGEAVAEKAEAVAAGAGVAEEM AERQSLPAETKPEVVVVPEGEAKPEVAAEPEVEAKVGSETEVGSGVEAQAAVADENALVSAEPEAGAEPVEIVIPEQVTA AASMVAPAGAAEKETVAPGQVAAEKTEEKTAAPAGRGRRVPAWAVLAVCCFAQFMVVLDVSIVNVALPSMQTELGLSSSG LQWVVNSYTLAFAGLLLFGGRAADLFGRRRVFITGLTLFTAASLAGGLANDQTMLIVARAVQGLGGAVLAPATLSMLMTS FPDPRERARALGMWGATAAGGGAMGALAGGVLTEIADWRWVLFVNVPIGLVLIVGARAALIESRGQARGVRDLDIPGTVT VTAGLTALVYGIVRTESSSWGSPVTIAWLAGAVVLLAAFLIIESRTANPLVPLAIFRRRALRYANTIGVVMGSIMFGLFF FLTLYLQQVKGQGPLEAGLALVPMPIMIIVGSQVSSRTVGRFGPRPLIIGASVIVASSVGWLSALSAHGSYWAEVFGPLA LLGFGMGINMVAVTTAATAGVPPQLAGLASGLLNTARQIGAAVGLAVLAIIADTHTDNELAAGADRADALTSGYSLGFLV CAALMLGAAVLAVFMPRKEVLVAQAGAAQARPEPERVEALAEA
Sequences:
>Translated_763_residues MAKSRGKPRARSAGSGGAGAPARRGTGPATPAAASEAATSEAIPEATADAAGGAGDLGPTGGNGAEADVAAEAADVAAGE VAADEIAGGEAADGEAGDAAAAGAGVAHEEADREEADVVAPAGEVSAEEAGVAAGTVATGEAVAEKAEAVAAGAGVAEEM AERQSLPAETKPEVVVVPEGEAKPEVAAEPEVEAKVGSETEVGSGVEAQAAVADENALVSAEPEAGAEPVEIVIPEQVTA AASMVAPAGAAEKETVAPGQVAAEKTEEKTAAPAGRGRRVPAWAVLAVCCFAQFMVVLDVSIVNVALPSMQTELGLSSSG LQWVVNSYTLAFAGLLLFGGRAADLFGRRRVFITGLTLFTAASLAGGLANDQTMLIVARAVQGLGGAVLAPATLSMLMTS FPDPRERARALGMWGATAAGGGAMGALAGGVLTEIADWRWVLFVNVPIGLVLIVGARAALIESRGQARGVRDLDIPGTVT VTAGLTALVYGIVRTESSSWGSPVTIAWLAGAVVLLAAFLIIESRTANPLVPLAIFRRRALRYANTIGVVMGSIMFGLFF FLTLYLQQVKGQGPLEAGLALVPMPIMIIVGSQVSSRTVGRFGPRPLIIGASVIVASSVGWLSALSAHGSYWAEVFGPLA LLGFGMGINMVAVTTAATAGVPPQLAGLASGLLNTARQIGAAVGLAVLAIIADTHTDNELAAGADRADALTSGYSLGFLV CAALMLGAAVLAVFMPRKEVLVAQAGAAQARPEPERVEALAEA >Mature_762_residues AKSRGKPRARSAGSGGAGAPARRGTGPATPAAASEAATSEAIPEATADAAGGAGDLGPTGGNGAEADVAAEAADVAAGEV AADEIAGGEAADGEAGDAAAAGAGVAHEEADREEADVVAPAGEVSAEEAGVAAGTVATGEAVAEKAEAVAAGAGVAEEMA ERQSLPAETKPEVVVVPEGEAKPEVAAEPEVEAKVGSETEVGSGVEAQAAVADENALVSAEPEAGAEPVEIVIPEQVTAA ASMVAPAGAAEKETVAPGQVAAEKTEEKTAAPAGRGRRVPAWAVLAVCCFAQFMVVLDVSIVNVALPSMQTELGLSSSGL QWVVNSYTLAFAGLLLFGGRAADLFGRRRVFITGLTLFTAASLAGGLANDQTMLIVARAVQGLGGAVLAPATLSMLMTSF PDPRERARALGMWGATAAGGGAMGALAGGVLTEIADWRWVLFVNVPIGLVLIVGARAALIESRGQARGVRDLDIPGTVTV TAGLTALVYGIVRTESSSWGSPVTIAWLAGAVVLLAAFLIIESRTANPLVPLAIFRRRALRYANTIGVVMGSIMFGLFFF LTLYLQQVKGQGPLEAGLALVPMPIMIIVGSQVSSRTVGRFGPRPLIIGASVIVASSVGWLSALSAHGSYWAEVFGPLAL LGFGMGINMVAVTTAATAGVPPQLAGLASGLLNTARQIGAAVGLAVLAIIADTHTDNELAAGADRADALTSGYSLGFLVC AALMLGAAVLAVFMPRKEVLVAQAGAAQARPEPERVEALAEA
Specific function: Involved in cephamycin export [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1790195, Length=481, Percent_Identity=28.4823284823285, Blast_Score=148, Evalue=1e-36, Organism=Escherichia coli, GI1789042, Length=401, Percent_Identity=29.426433915212, Blast_Score=140, Evalue=4e-34, Organism=Escherichia coli, GI1788710, Length=451, Percent_Identity=27.0509977827051, Blast_Score=135, Evalue=7e-33, Organism=Escherichia coli, GI87081983, Length=408, Percent_Identity=28.4313725490196, Blast_Score=129, Evalue=6e-31, Organism=Escherichia coli, GI1788392, Length=410, Percent_Identity=30.7317073170732, Blast_Score=119, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6324954, Length=422, Percent_Identity=26.0663507109005, Blast_Score=130, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6323520, Length=437, Percent_Identity=24.7139588100687, Blast_Score=85, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323935, Length=518, Percent_Identity=24.3243243243243, Blast_Score=84, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6322958, Length=411, Percent_Identity=23.8442822384428, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321663, Length=152, Percent_Identity=30.2631578947368, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319770, Length=311, Percent_Identity=24.4372990353698, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 76197; Mature: 76065
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSRGKPRARSAGSGGAGAPARRGTGPATPAAASEAATSEAIPEATADAAGGAGDLGPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCC GGNGAEADVAAEAADVAAGEVAADEIAGGEAADGEAGDAAAAGAGVAHEEADREEADVVA CCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHCCCCCCCEEC PAGEVSAEEAGVAAGTVATGEAVAEKAEAVAAGAGVAEEMAERQSLPAETKPEVVVVPEG CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCC EAKPEVAAEPEVEAKVGSETEVGSGVEAQAAVADENALVSAEPEAGAEPVEIVIPEQVTA CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHEECCCCCEEECCCCCCCCCEEEECCCHHHH AASMVAPAGAAEKETVAPGQVAAEKTEEKTAAPAGRGRRVPAWAVLAVCCFAQFMVVLDV HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SIVNVALPSMQTELGLSSSGLQWVVNSYTLAFAGLLLFGGRAADLFGRRRVFITGLTLFT HHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEHHHHHH AASLAGGLANDQTMLIVARAVQGLGGAVLAPATLSMLMTSFPDPRERARALGMWGATAAG HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC GGAMGALAGGVLTEIADWRWVLFVNVPIGLVLIVGARAALIESRGQARGVRDLDIPGTVT CCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEE VTAGLTALVYGIVRTESSSWGSPVTIAWLAGAVVLLAAFLIIESRTANPLVPLAIFRRRA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LRYANTIGVVMGSIMFGLFFFLTLYLQQVKGQGPLEAGLALVPMPIMIIVGSQVSSRTVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCEEEEECCCHHHCCHH RFGPRPLIIGASVIVASSVGWLSALSAHGSYWAEVFGPLALLGFGMGINMVAVTTAATAG CCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCC VPPQLAGLASGLLNTARQIGAAVGLAVLAIIADTHTDNELAAGADRADALTSGYSLGFLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCCHHHHHH CAALMLGAAVLAVFMPRKEVLVAQAGAAQARPEPERVEALAEA HHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCHHHHHHHHCC >Mature Secondary Structure AKSRGKPRARSAGSGGAGAPARRGTGPATPAAASEAATSEAIPEATADAAGGAGDLGPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCC GGNGAEADVAAEAADVAAGEVAADEIAGGEAADGEAGDAAAAGAGVAHEEADREEADVVA CCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHCCCCCCCEEC PAGEVSAEEAGVAAGTVATGEAVAEKAEAVAAGAGVAEEMAERQSLPAETKPEVVVVPEG CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCC EAKPEVAAEPEVEAKVGSETEVGSGVEAQAAVADENALVSAEPEAGAEPVEIVIPEQVTA CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHEECCCCCEEECCCCCCCCCEEEECCCHHHH AASMVAPAGAAEKETVAPGQVAAEKTEEKTAAPAGRGRRVPAWAVLAVCCFAQFMVVLDV HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SIVNVALPSMQTELGLSSSGLQWVVNSYTLAFAGLLLFGGRAADLFGRRRVFITGLTLFT HHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEHHHHHH AASLAGGLANDQTMLIVARAVQGLGGAVLAPATLSMLMTSFPDPRERARALGMWGATAAG HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC GGAMGALAGGVLTEIADWRWVLFVNVPIGLVLIVGARAALIESRGQARGVRDLDIPGTVT CCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEE VTAGLTALVYGIVRTESSSWGSPVTIAWLAGAVVLLAAFLIIESRTANPLVPLAIFRRRA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LRYANTIGVVMGSIMFGLFFFLTLYLQQVKGQGPLEAGLALVPMPIMIIVGSQVSSRTVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCEEEEECCCHHHCCHH RFGPRPLIIGASVIVASSVGWLSALSAHGSYWAEVFGPLALLGFGMGINMVAVTTAATAG CCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCC VPPQLAGLASGLLNTARQIGAAVGLAVLAIIADTHTDNELAAGADRADALTSGYSLGFLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCCHHHHHH CAALMLGAAVLAVFMPRKEVLVAQAGAAQARPEPERVEALAEA HHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8440253 [H]