| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312581
Identifier: 158312581
GI number: 158312581
Start: 841912
End: 843294
Strand: Direct
Name: 158312581
Synonym: Franean1_0725
Alternate gene names: NA
Gene position: 841912-843294 (Clockwise)
Preceding gene: 158312580
Following gene: 158312582
Centisome position: 9.37
GC content: 75.49
Gene sequence:
>1383_bases ATGGACCGCATCCGCTTCCTCAACGCGTTCGACACCGCCCTGCTCGAATACCAGCTCCTGCACGCCGACGTGCCGATAAA CGTGAACTGCCTGCTTCTCGGTACCGGACCGGCTCCTGGAATCGACGAGCTACGCGCTTTTGTCGCCGAGCGCCTGCGCC GGTTCCCGCTGTTGACCGAGCGGCTCGTCTGCCTGCCGGAGCGCCGCGCGAGATACGGCTGGCGCGCCGATCCCGAGGTC GACCTGGACTGCCTCGTCCGCGAGCAGCCGGTGTCGTCGGCCGCGCCCGCACCCCCGTCCGTGGACGGGGCCGCGGCGGC ACCGGGGTTCGCCGGGACGGCGCTGCGCGACTTCGTGGAACGGCTCAGCGGCGCGGTGGTGCCGCTGTCGGGGCCGCCGT GGCAGCTGTGGCTGCTGCGCTCCGCCGACGATACCGAGTTCGCCCTGTTCTACCGGGCCAGCCACATCCAGCAGGACGGC ACGGCGAAGAACCTCGTCCTCTCGGCCCTGTTCGGCATCGGTACCGACCCGATGGCGTTCGTCCCGCCGCAGCGGCGCGA ACCCGGTCGTGCCCGGGCCCGGGAGGTCGGAGCCGCCGCTGCGCGCTCCCTGCGGTGGCTCACCCCCGCCGCCGGGTCGG CGGTCCTCGCGGCTCCGTGGGCGGGGCGGACCACACACAGCTGGGAGACGACGTCCCTGTCGCTGCTGCGCTCGATCGGC GCCGCGGTGGGCGGCACCGTCAACGACGCCTTCCTGGCGGCGCTCGCCGGCGCCCTGCGACGGTGGACCGGCGCGGGTGG CGCGGCCGGCGCTGGCGGCGTGGTCGGGGCGGGGGGTGCGCTGCCCGGCCGGGCCGGTGGGATGGCGGTCGCGATGGCCG TCAGCACCCGCCAGCCGGGGGAGCGCGCGATGCTCGCGAACTTCGTGGCGGGTGCCCGCGTCGTCCTGCCGTGTGCCGAG CCGCTCCCGCTCGGCCGCCTGTTCGCGGTACGTGACCGGACGGATCGTCTCAAGCAGGGCGGCACGCTCGGCCTGGGCGA GCGCCTGCTCTTCGAGCTGCTGCCCGCGCGGGCCCGGCCCCGCCTGTTCGGCGCCGGGCTGAGCGGACGTTCGTCGGTGC TGTCGGTGTCCAACCAGGCCGGGGCACCGGGCCCACTGGCCGCGGCCGGACGGCCGATCACGACGGCCGTGCCCGTCCCG ACCCTGTTCCCGGGCGAGCGGCTCGCCTGCCACCTCAGCGGCCTCGGTGACACCGTGAGCGTCGGGACGGCCGCGGACGC CGGTCTGCCCGGATCGCGCGATCTCGCCCGGCTGTGGGCGGCGGAGGTCACGTTGCTCGCCGACGCCGTCCGGGCGTTCG CCGGGGACCGGGCGCTGCCATGA
Upstream 100 bases:
>100_bases CCTGAGGCGTCGGCTCAGCGGATTTTCTCCGCCCTTGCCCCGGTCGCCACCGCACCGAATCCGTGGAGTGAAATCGGAGC AGAGAGCGAGCCCACAGTCG
Downstream 100 bases:
>100_bases CCCGGACGCCGGCCCCGCGCCGGGCCCGGGCTGTGCGAGGGGGCTGGCTTGGGCGCGAGGGCTGGTCTGTGCGAGGGGGC TGGCTTGTGCAGGGGGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MDRIRFLNAFDTALLEYQLLHADVPINVNCLLLGTGPAPGIDELRAFVAERLRRFPLLTERLVCLPERRARYGWRADPEV DLDCLVREQPVSSAAPAPPSVDGAAAAPGFAGTALRDFVERLSGAVVPLSGPPWQLWLLRSADDTEFALFYRASHIQQDG TAKNLVLSALFGIGTDPMAFVPPQRREPGRARAREVGAAAARSLRWLTPAAGSAVLAAPWAGRTTHSWETTSLSLLRSIG AAVGGTVNDAFLAALAGALRRWTGAGGAAGAGGVVGAGGALPGRAGGMAVAMAVSTRQPGERAMLANFVAGARVVLPCAE PLPLGRLFAVRDRTDRLKQGGTLGLGERLLFELLPARARPRLFGAGLSGRSSVLSVSNQAGAPGPLAAAGRPITTAVPVP TLFPGERLACHLSGLGDTVSVGTAADAGLPGSRDLARLWAAEVTLLADAVRAFAGDRALP
Sequences:
>Translated_460_residues MDRIRFLNAFDTALLEYQLLHADVPINVNCLLLGTGPAPGIDELRAFVAERLRRFPLLTERLVCLPERRARYGWRADPEV DLDCLVREQPVSSAAPAPPSVDGAAAAPGFAGTALRDFVERLSGAVVPLSGPPWQLWLLRSADDTEFALFYRASHIQQDG TAKNLVLSALFGIGTDPMAFVPPQRREPGRARAREVGAAAARSLRWLTPAAGSAVLAAPWAGRTTHSWETTSLSLLRSIG AAVGGTVNDAFLAALAGALRRWTGAGGAAGAGGVVGAGGALPGRAGGMAVAMAVSTRQPGERAMLANFVAGARVVLPCAE PLPLGRLFAVRDRTDRLKQGGTLGLGERLLFELLPARARPRLFGAGLSGRSSVLSVSNQAGAPGPLAAAGRPITTAVPVP TLFPGERLACHLSGLGDTVSVGTAADAGLPGSRDLARLWAAEVTLLADAVRAFAGDRALP >Mature_460_residues MDRIRFLNAFDTALLEYQLLHADVPINVNCLLLGTGPAPGIDELRAFVAERLRRFPLLTERLVCLPERRARYGWRADPEV DLDCLVREQPVSSAAPAPPSVDGAAAAPGFAGTALRDFVERLSGAVVPLSGPPWQLWLLRSADDTEFALFYRASHIQQDG TAKNLVLSALFGIGTDPMAFVPPQRREPGRARAREVGAAAARSLRWLTPAAGSAVLAAPWAGRTTHSWETTSLSLLRSIG AAVGGTVNDAFLAALAGALRRWTGAGGAAGAGGVVGAGGALPGRAGGMAVAMAVSTRQPGERAMLANFVAGARVVLPCAE PLPLGRLFAVRDRTDRLKQGGTLGLGERLLFELLPARARPRLFGAGLSGRSSVLSVSNQAGAPGPLAAAGRPITTAVPVP TLFPGERLACHLSGLGDTVSVGTAADAGLPGSRDLARLWAAEVTLLADAVRAFAGDRALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47813; Mature: 47813
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRIRFLNAFDTALLEYQLLHADVPINVNCLLLGTGPAPGIDELRAFVAERLRRFPLLTE CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHH RLVCLPERRARYGWRADPEVDLDCLVREQPVSSAAPAPPSVDGAAAAPGFAGTALRDFVE HHHHCCCHHHCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RLSGAVVPLSGPPWQLWLLRSADDTEFALFYRASHIQQDGTAKNLVLSALFGIGTDPMAF HHCCCEEECCCCCEEEEEEECCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHCCCCCCEE VPPQRREPGRARAREVGAAAARSLRWLTPAAGSAVLAAPWAGRTTHSWETTSLSLLRSIG CCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH AAVGGTVNDAFLAALAGALRRWTGAGGAAGAGGVVGAGGALPGRAGGMAVAMAVSTRQPG HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCC ERAMLANFVAGARVVLPCAEPLPLGRLFAVRDRTDRLKQGGTLGLGERLLFELLPARARP HHHHHHHHHCCCEEEEECCCCCCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCCC RLFGAGLSGRSSVLSVSNQAGAPGPLAAAGRPITTAVPVPTLFPGERLACHLSGLGDTVS CEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEE VGTAADAGLPGSRDLARLWAAEVTLLADAVRAFAGDRALP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDRIRFLNAFDTALLEYQLLHADVPINVNCLLLGTGPAPGIDELRAFVAERLRRFPLLTE CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHH RLVCLPERRARYGWRADPEVDLDCLVREQPVSSAAPAPPSVDGAAAAPGFAGTALRDFVE HHHHCCCHHHCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RLSGAVVPLSGPPWQLWLLRSADDTEFALFYRASHIQQDGTAKNLVLSALFGIGTDPMAF HHCCCEEECCCCCEEEEEEECCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHCCCCCCEE VPPQRREPGRARAREVGAAAARSLRWLTPAAGSAVLAAPWAGRTTHSWETTSLSLLRSIG CCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH AAVGGTVNDAFLAALAGALRRWTGAGGAAGAGGVVGAGGALPGRAGGMAVAMAVSTRQPG HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCC ERAMLANFVAGARVVLPCAEPLPLGRLFAVRDRTDRLKQGGTLGLGERLLFELLPARARP HHHHHHHHHCCCEEEEECCCCCCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCCC RLFGAGLSGRSSVLSVSNQAGAPGPLAAAGRPITTAVPVPTLFPGERLACHLSGLGDTVS CEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEE VGTAADAGLPGSRDLARLWAAEVTLLADAVRAFAGDRALP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA