| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312580
Identifier: 158312580
GI number: 158312580
Start: 840918
End: 841577
Strand: Direct
Name: 158312580
Synonym: Franean1_0724
Alternate gene names: NA
Gene position: 840918-841577 (Clockwise)
Preceding gene: 158312579
Following gene: 158312581
Centisome position: 9.36
GC content: 77.42
Gene sequence:
>660_bases ATGCGCACAGGCCGAGGCATGCTCATCGTGGCGTCACTGTCGCTCGCGGCGTCGGCCGCCGGCTGCGGTGGGTCGGACGG ACCGGCGGACCAGGCTGTGTCGGCTCCGCCGGGCCCGCCGGTCGTCTCCGGGACCAGCCAGCCGCCGGCCGCGCCCACCG CGCGGCCGACCGCCGTGACGGGCTCGACCGGCCCGTCCGCCGGGATCCCGGTCACGGGTGCCGGCGGTGCCGGGCCGGCC TGCGCCTCCACCGGCCTCGCCGCGTCCCTCGAGGACGTCCAGGGCGCGGCGGGCCACGTCTACGGGCGGATCGTGCTCAG GAACACCGGTCCCGGCACCTGCTCGGTCGTCGGCTACCCCGGTGTGTCGGTGGTGGACGCCACCGGTGGCCAGGTCGGGG CGGCGGCTGACCGCACGGGGCCGGCCGGCACCCCGGTGACGCTGCCACCGGGCGGCAGCACCGGCGCGACGCTGGCGATC ACGCAGGCCGGGCTGCTTCCGGGCTGCGAGGAACCAGGTCAGGCGGTGCGGGGCGCGAATCTGCGCGTGTACCCGCCCGA CGACCGTGGGAGCCTGCTCGCGGCACTGCCGGCCGGTGTCGAGACGTGTCGGGATCCGGCTGTGCACCAGCTCGCGGTCG GTGCCTTCGGCCAGCCCTGA
Upstream 100 bases:
>100_bases GCTCACCGAGCTGGGCGTTCGTGACCTGGCCGAGGCCGCAACCTGACACCCCGGCGGGGCCGTGGTCTGCGGCGGCCGGG CGCGGGGTAGGCAGGCCGGT
Downstream 100 bases:
>100_bases CCATCCTGGTCACCGGCGCGCGCGCCGCGCCGCGGTGACGATTCCGCCCGGCGGTCGAATTCCGGGGTGGGTGCCACCGA AAGGGGCGGTGGGCCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVTGSTGPSAGIPVTGAGGAGPA CASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYPGVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAI TQAGLLPGCEEPGQAVRGANLRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP
Sequences:
>Translated_219_residues MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVTGSTGPSAGIPVTGAGGAGPA CASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYPGVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAI TQAGLLPGCEEPGQAVRGANLRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP >Mature_219_residues MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVTGSTGPSAGIPVTGAGGAGPA CASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYPGVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAI TQAGLLPGCEEPGQAVRGANLRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20600; Mature: 20600
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVT CCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE GSTGPSAGIPVTGAGGAGPACASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYP CCCCCCCCCEEECCCCCCCHHHHCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECC GVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAITQAGLLPGCEEPGQAVRGAN CCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC LRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP EEEECCCCCCCEEEECCCCHHHHCCCHHHHHHHCCCCCC >Mature Secondary Structure MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVT CCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE GSTGPSAGIPVTGAGGAGPACASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYP CCCCCCCCCEEECCCCCCCHHHHCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECC GVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAITQAGLLPGCEEPGQAVRGAN CCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC LRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP EEEECCCCCCCEEEECCCCHHHHCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA