Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312580

Identifier: 158312580

GI number: 158312580

Start: 840918

End: 841577

Strand: Direct

Name: 158312580

Synonym: Franean1_0724

Alternate gene names: NA

Gene position: 840918-841577 (Clockwise)

Preceding gene: 158312579

Following gene: 158312581

Centisome position: 9.36

GC content: 77.42

Gene sequence:

>660_bases
ATGCGCACAGGCCGAGGCATGCTCATCGTGGCGTCACTGTCGCTCGCGGCGTCGGCCGCCGGCTGCGGTGGGTCGGACGG
ACCGGCGGACCAGGCTGTGTCGGCTCCGCCGGGCCCGCCGGTCGTCTCCGGGACCAGCCAGCCGCCGGCCGCGCCCACCG
CGCGGCCGACCGCCGTGACGGGCTCGACCGGCCCGTCCGCCGGGATCCCGGTCACGGGTGCCGGCGGTGCCGGGCCGGCC
TGCGCCTCCACCGGCCTCGCCGCGTCCCTCGAGGACGTCCAGGGCGCGGCGGGCCACGTCTACGGGCGGATCGTGCTCAG
GAACACCGGTCCCGGCACCTGCTCGGTCGTCGGCTACCCCGGTGTGTCGGTGGTGGACGCCACCGGTGGCCAGGTCGGGG
CGGCGGCTGACCGCACGGGGCCGGCCGGCACCCCGGTGACGCTGCCACCGGGCGGCAGCACCGGCGCGACGCTGGCGATC
ACGCAGGCCGGGCTGCTTCCGGGCTGCGAGGAACCAGGTCAGGCGGTGCGGGGCGCGAATCTGCGCGTGTACCCGCCCGA
CGACCGTGGGAGCCTGCTCGCGGCACTGCCGGCCGGTGTCGAGACGTGTCGGGATCCGGCTGTGCACCAGCTCGCGGTCG
GTGCCTTCGGCCAGCCCTGA

Upstream 100 bases:

>100_bases
GCTCACCGAGCTGGGCGTTCGTGACCTGGCCGAGGCCGCAACCTGACACCCCGGCGGGGCCGTGGTCTGCGGCGGCCGGG
CGCGGGGTAGGCAGGCCGGT

Downstream 100 bases:

>100_bases
CCATCCTGGTCACCGGCGCGCGCGCCGCGCCGCGGTGACGATTCCGCCCGGCGGTCGAATTCCGGGGTGGGTGCCACCGA
AAGGGGCGGTGGGCCAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVTGSTGPSAGIPVTGAGGAGPA
CASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYPGVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAI
TQAGLLPGCEEPGQAVRGANLRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP

Sequences:

>Translated_219_residues
MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVTGSTGPSAGIPVTGAGGAGPA
CASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYPGVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAI
TQAGLLPGCEEPGQAVRGANLRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP
>Mature_219_residues
MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVTGSTGPSAGIPVTGAGGAGPA
CASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYPGVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAI
TQAGLLPGCEEPGQAVRGANLRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20600; Mature: 20600

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVT
CCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
GSTGPSAGIPVTGAGGAGPACASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYP
CCCCCCCCCEEECCCCCCCHHHHCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECC
GVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAITQAGLLPGCEEPGQAVRGAN
CCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC
LRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP
EEEECCCCCCCEEEECCCCHHHHCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MRTGRGMLIVASLSLAASAAGCGGSDGPADQAVSAPPGPPVVSGTSQPPAAPTARPTAVT
CCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
GSTGPSAGIPVTGAGGAGPACASTGLAASLEDVQGAAGHVYGRIVLRNTGPGTCSVVGYP
CCCCCCCCCEEECCCCCCCHHHHCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECC
GVSVVDATGGQVGAAADRTGPAGTPVTLPPGGSTGATLAITQAGLLPGCEEPGQAVRGAN
CCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC
LRVYPPDDRGSLLAALPAGVETCRDPAVHQLAVGAFGQP
EEEECCCCCCCEEEECCCCHHHHCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA