| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yjcK [H]
Identifier: 158312549
GI number: 158312549
Start: 810916
End: 811548
Strand: Direct
Name: yjcK [H]
Synonym: Franean1_0692
Alternate gene names: 158312549
Gene position: 810916-811548 (Clockwise)
Preceding gene: 158312548
Following gene: 158312550
Centisome position: 9.03
GC content: 72.2
Gene sequence:
>633_bases GTGAGAGCGCCTGGCTGGCCGGTCACCCTGCGCCACGATGACGTCGTCGTCCGGCCCATGCGCCTGCGTGACGCCCCGAC CTGGGTCGAGGTCCGCACGCGCAACGCCGACTGGCTCGCTCCGTGGGAGGCCACCTCGCCGGGCTCGGCGTCGGTGCGGG CCACCTGGAACGAGCGCCAGACCATCGGCGTCTACACGCAGATGCTCCAGCGGCTGCGGGCACAGGCCCGGGTGGGCGCG GCGCTCCCGTTCGCCATCGCCGTCGACGGACGGTTGGTGGGGCAGCTCACAGTGTCAACGATCGTGCGCGGGGCGTTCAA CAACGGCCAGGTCGGCTACTGGGTGGACGGCGCGCACGCCGGCCGCGGTATCGCCCCGACGGCGCTGGCGATGGTCACCG ACCACTGTTTCGGCCCGGTCGGGCTGCACCGGCTGGAGGCCAACGTCCGCCCGGAGAACGCGGCCAGCCGCCGGATGCTG GTGAAGCTGGGCTTCCGCGAGGAGGGCCTGCACCGCAGATTTCTCGCGATCGACGGCCGGTACCGCGACCATATCGGCTA TGCACTGACGACCGAGGACGTCCCCGGGGGATTGCTGGCCCGCTGGAGCCGCACCCGTTCGCCCTCCTCCTGA
Upstream 100 bases:
>100_bases TCGCGCACGCGATCGCGCAGCTGCGAGGCGGCACCGACCACTCCGGCGGCCCGTCGGGTACGGCGCCCCACCCGCCCGCG TCCACCGGGGGCACACCGGC
Downstream 100 bases:
>100_bases ACAGGCTTACGGCACAGGCTTTCGCCCCGGCGTCGTCGGTGCCGGTGGTCTCTTTGTCCAGTGCCCGTTAGCGGGGTTTC CGGCGTCGCCCAGGCCCCTC
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MRAPGWPVTLRHDDVVVRPMRLRDAPTWVEVRTRNADWLAPWEATSPGSASVRATWNERQTIGVYTQMLQRLRAQARVGA ALPFAIAVDGRLVGQLTVSTIVRGAFNNGQVGYWVDGAHAGRGIAPTALAMVTDHCFGPVGLHRLEANVRPENAASRRML VKLGFREEGLHRRFLAIDGRYRDHIGYALTTEDVPGGLLARWSRTRSPSS
Sequences:
>Translated_210_residues MRAPGWPVTLRHDDVVVRPMRLRDAPTWVEVRTRNADWLAPWEATSPGSASVRATWNERQTIGVYTQMLQRLRAQARVGA ALPFAIAVDGRLVGQLTVSTIVRGAFNNGQVGYWVDGAHAGRGIAPTALAMVTDHCFGPVGLHRLEANVRPENAASRRML VKLGFREEGLHRRFLAIDGRYRDHIGYALTTEDVPGGLLARWSRTRSPSS >Mature_210_residues MRAPGWPVTLRHDDVVVRPMRLRDAPTWVEVRTRNADWLAPWEATSPGSASVRATWNERQTIGVYTQMLQRLRAQARVGA ALPFAIAVDGRLVGQLTVSTIVRGAFNNGQVGYWVDGAHAGRGIAPTALAMVTDHCFGPVGLHRLEANVRPENAASRRML VKLGFREEGLHRRFLAIDGRYRDHIGYALTTEDVPGGLLARWSRTRSPSS
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5 [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787305, Length=192, Percent_Identity=31.7708333333333, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 23256; Mature: 23256
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPGWPVTLRHDDVVVRPMRLRDAPTWVEVRTRNADWLAPWEATSPGSASVRATWNERQ CCCCCCCEEEECCCEEEECEECCCCCCEEEEEECCCCEECCCCCCCCCCCEEEEECCCCC TIGVYTQMLQRLRAQARVGAALPFAIAVDGRLVGQLTVSTIVRGAFNNGQVGYWVDGAHA CHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEHHHHHHHHHHCCCCCCCEEEEECCCCC GRGIAPTALAMVTDHCFGPVGLHRLEANVRPENAASRRMLVKLGFREEGLHRRFLAIDGR CCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHCEEEEEECCCCCCCCEEEEEECCC YRDHIGYALTTEDVPGGLLARWSRTRSPSS CCCCCCEEEECCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MRAPGWPVTLRHDDVVVRPMRLRDAPTWVEVRTRNADWLAPWEATSPGSASVRATWNERQ CCCCCCCEEEECCCEEEECEECCCCCCEEEEEECCCCEECCCCCCCCCCCEEEEECCCCC TIGVYTQMLQRLRAQARVGAALPFAIAVDGRLVGQLTVSTIVRGAFNNGQVGYWVDGAHA CHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEHHHHHHHHHHCCCCCCCEEEEECCCCC GRGIAPTALAMVTDHCFGPVGLHRLEANVRPENAASRRMLVKLGFREEGLHRRFLAIDGR CCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHCEEEEEECCCCCCCCEEEEEECCC YRDHIGYALTTEDVPGGLLARWSRTRSPSS CCCCCCEEEECCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]