Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yngB [H]

Identifier: 158312545

GI number: 158312545

Start: 807092

End: 808096

Strand: Direct

Name: yngB [H]

Synonym: Franean1_0688

Alternate gene names: 158312545

Gene position: 807092-808096 (Clockwise)

Preceding gene: 158312542

Following gene: 158312546

Centisome position: 8.99

GC content: 71.94

Gene sequence:

>1005_bases
ATGCCAGTGACGAAGGCGGTCATTCCCGCCGCGGGTCTGGGGACCCGGTTCCTGCCCGCGACGAAGTCGGTTCCGAAGGA
GATGCTACCTGTCGTCGACAGGCCGGCCATCGAATACGTCGTCGAAGAGGCCTCCCGCGCGGGCCTGCGTGATGTGCTGC
TCGTGACGAGCCGCACCAAGAAGGCCATCGAGGACCACTTCGACCGGGAGGGGGATGTCGAGGCCGCGCTTGAGCGCAAG
GGCGACAAGGTTCGCCTCGAACGCGTCCGGGCCTCCGCCGAGCTGGCCGAGGTCCACTCCGTCCGTCAGCCCTCGCCGCG
GGGGCTCGGTCACGCCGTTCTGTGCGCCTCCGCGCACGTGGGCGACGAGCCGTTCGCGGTCCTGCTCGGGGACGATCTCA
TCGACGAGCGTGACCCGCTGCTGGTCGAGATGCTCGCCGTCCAGGAGCGGCACGGCGGGGCGGTCGTCGCGCTGATGGAG
GTGCCCGAGGAGGCCGTCTCCATGTACGGCGTGGCGACGATCGCTCCGACGGCCGCTGCTCCCGCCTCGGCTGCTCCCGC
CTCGGCGGTCTCGGCGGTCTCGGCGGCTTCGGTGGAGCGGGTCTCGGCGGGCGGGTCCGGCGGGCGCTACCGGACGGTGC
GCATCACCGACCTGGTCGAGAAGCCGCCGGTGGACGAGGCGCCCAGCAACCTGGCTGTCATCGGGCGCTACGTGCTGCCT
GCGGAGATCTTCGACGTCCTGCGGGCCACGCCGCCCGGCCGGGGGGACGAGATCCAGCTGACCGACGCGCTGCGGACGCT
GGCGGAGCGGGCCGGCGCCGATCCGGGCGCGGAGATTCCGGTGCACGGCGTCGTGTTCACCGGGCGCCGTTATGACACCG
GTGACCGGGTCGACTACCTCAAGGCGGTCGTCCGGCTCGCCTGCGAGCGGCCGGACCTCGGCCCGGAGTTCTACCCGTGG
CTGGAGGAGTACGTGGCGTCCGGCGGTCCCAAGGCCGAATGCTGA

Upstream 100 bases:

>100_bases
ATGTGGGTTCACGGCCAACACGGATGATCACTAGTTGTGAATGCCCTGTGTGTGTACGCCGTCGTGCCCTGGGGATGCCC
GCCCGACTAAGGTTTCGCCC

Downstream 100 bases:

>100_bases
CCGGCGGGGCGGGCTCGCCCGCGGCCGCGGTGGCCGTGGGCCTGCCTGTCCCGAGGGCGGACGCCGACGGGCTTACCTGA
CGGGGCGCTCCGAGCGGGCT

Product: UTP--glucose-1-phosphate uridylyltransferase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MPVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTKKAIEDHFDREGDVEAALERK
GDKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHVGDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALME
VPEEAVSMYGVATIAPTAAAPASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLP
AEIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYLKAVVRLACERPDLGPEFYPW
LEEYVASGGPKAEC

Sequences:

>Translated_334_residues
MPVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTKKAIEDHFDREGDVEAALERK
GDKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHVGDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALME
VPEEAVSMYGVATIAPTAAAPASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLP
AEIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYLKAVVRLACERPDLGPEFYPW
LEEYVASGGPKAEC
>Mature_333_residues
PVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTKKAIEDHFDREGDVEAALERKG
DKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHVGDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALMEV
PEEAVSMYGVATIAPTAAAPASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLPA
EIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYLKAVVRLACERPDLGPEFYPWL
EEYVASGGPKAEC

Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG) [H]

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=327, Percent_Identity=40.9785932721713, Blast_Score=221, Evalue=4e-59,
Organism=Escherichia coli, GI1788355, Length=333, Percent_Identity=35.1351351351351, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1790224, Length=257, Percent_Identity=24.9027237354086, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005771
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 35476; Mature: 35345

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTK
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEEHHHHH
KAIEDHFDREGDVEAALERKGDKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHV
HHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
GDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALMEVPEEAVSMYGVATIAPTAAA
CCCCEEEEECCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC
PASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLP
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHH
AEIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYL
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHH
KAVVRLACERPDLGPEFYPWLEEYVASGGPKAEC
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEEHHHHH
KAIEDHFDREGDVEAALERKGDKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHV
HHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
GDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALMEVPEEAVSMYGVATIAPTAAA
CCCCEEEEECCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC
PASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLP
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHH
AEIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYL
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHH
KAVVRLACERPDLGPEFYPWLEEYVASGGPKAEC
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]