| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yngB [H]
Identifier: 158312545
GI number: 158312545
Start: 807092
End: 808096
Strand: Direct
Name: yngB [H]
Synonym: Franean1_0688
Alternate gene names: 158312545
Gene position: 807092-808096 (Clockwise)
Preceding gene: 158312542
Following gene: 158312546
Centisome position: 8.99
GC content: 71.94
Gene sequence:
>1005_bases ATGCCAGTGACGAAGGCGGTCATTCCCGCCGCGGGTCTGGGGACCCGGTTCCTGCCCGCGACGAAGTCGGTTCCGAAGGA GATGCTACCTGTCGTCGACAGGCCGGCCATCGAATACGTCGTCGAAGAGGCCTCCCGCGCGGGCCTGCGTGATGTGCTGC TCGTGACGAGCCGCACCAAGAAGGCCATCGAGGACCACTTCGACCGGGAGGGGGATGTCGAGGCCGCGCTTGAGCGCAAG GGCGACAAGGTTCGCCTCGAACGCGTCCGGGCCTCCGCCGAGCTGGCCGAGGTCCACTCCGTCCGTCAGCCCTCGCCGCG GGGGCTCGGTCACGCCGTTCTGTGCGCCTCCGCGCACGTGGGCGACGAGCCGTTCGCGGTCCTGCTCGGGGACGATCTCA TCGACGAGCGTGACCCGCTGCTGGTCGAGATGCTCGCCGTCCAGGAGCGGCACGGCGGGGCGGTCGTCGCGCTGATGGAG GTGCCCGAGGAGGCCGTCTCCATGTACGGCGTGGCGACGATCGCTCCGACGGCCGCTGCTCCCGCCTCGGCTGCTCCCGC CTCGGCGGTCTCGGCGGTCTCGGCGGCTTCGGTGGAGCGGGTCTCGGCGGGCGGGTCCGGCGGGCGCTACCGGACGGTGC GCATCACCGACCTGGTCGAGAAGCCGCCGGTGGACGAGGCGCCCAGCAACCTGGCTGTCATCGGGCGCTACGTGCTGCCT GCGGAGATCTTCGACGTCCTGCGGGCCACGCCGCCCGGCCGGGGGGACGAGATCCAGCTGACCGACGCGCTGCGGACGCT GGCGGAGCGGGCCGGCGCCGATCCGGGCGCGGAGATTCCGGTGCACGGCGTCGTGTTCACCGGGCGCCGTTATGACACCG GTGACCGGGTCGACTACCTCAAGGCGGTCGTCCGGCTCGCCTGCGAGCGGCCGGACCTCGGCCCGGAGTTCTACCCGTGG CTGGAGGAGTACGTGGCGTCCGGCGGTCCCAAGGCCGAATGCTGA
Upstream 100 bases:
>100_bases ATGTGGGTTCACGGCCAACACGGATGATCACTAGTTGTGAATGCCCTGTGTGTGTACGCCGTCGTGCCCTGGGGATGCCC GCCCGACTAAGGTTTCGCCC
Downstream 100 bases:
>100_bases CCGGCGGGGCGGGCTCGCCCGCGGCCGCGGTGGCCGTGGGCCTGCCTGTCCCGAGGGCGGACGCCGACGGGCTTACCTGA CGGGGCGCTCCGAGCGGGCT
Product: UTP--glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTKKAIEDHFDREGDVEAALERK GDKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHVGDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALME VPEEAVSMYGVATIAPTAAAPASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLP AEIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYLKAVVRLACERPDLGPEFYPW LEEYVASGGPKAEC
Sequences:
>Translated_334_residues MPVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTKKAIEDHFDREGDVEAALERK GDKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHVGDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALME VPEEAVSMYGVATIAPTAAAPASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLP AEIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYLKAVVRLACERPDLGPEFYPW LEEYVASGGPKAEC >Mature_333_residues PVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTKKAIEDHFDREGDVEAALERKG DKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHVGDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALMEV PEEAVSMYGVATIAPTAAAPASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLPA EIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYLKAVVRLACERPDLGPEFYPWL EEYVASGGPKAEC
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG) [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=327, Percent_Identity=40.9785932721713, Blast_Score=221, Evalue=4e-59, Organism=Escherichia coli, GI1788355, Length=333, Percent_Identity=35.1351351351351, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1790224, Length=257, Percent_Identity=24.9027237354086, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 35476; Mature: 35345
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTK CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEEHHHHH KAIEDHFDREGDVEAALERKGDKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHV HHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC GDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALMEVPEEAVSMYGVATIAPTAAA CCCCEEEEECCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLP CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHH AEIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYL HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHH KAVVRLACERPDLGPEFYPWLEEYVASGGPKAEC HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PVTKAVIPAAGLGTRFLPATKSVPKEMLPVVDRPAIEYVVEEASRAGLRDVLLVTSRTK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEEHHHHH KAIEDHFDREGDVEAALERKGDKVRLERVRASAELAEVHSVRQPSPRGLGHAVLCASAHV HHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC GDEPFAVLLGDDLIDERDPLLVEMLAVQERHGGAVVALMEVPEEAVSMYGVATIAPTAAA CCCCEEEEECCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PASAAPASAVSAVSAASVERVSAGGSGGRYRTVRITDLVEKPPVDEAPSNLAVIGRYVLP CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHH AEIFDVLRATPPGRGDEIQLTDALRTLAERAGADPGAEIPVHGVVFTGRRYDTGDRVDYL HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHH KAVVRLACERPDLGPEFYPWLEEYVASGGPKAEC HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]