| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mmpL3 [H]
Identifier: 158312513
GI number: 158312513
Start: 766611
End: 769001
Strand: Direct
Name: mmpL3 [H]
Synonym: Franean1_0656
Alternate gene names: 158312513
Gene position: 766611-769001 (Clockwise)
Preceding gene: 158312511
Following gene: 158312520
Centisome position: 8.53
GC content: 73.19
Gene sequence:
>2391_bases GTGTTCACGGCAGTAGCCAAGCTAGTCACCCGCCGGCCCCGACTTGTGCTTCTGGTAACCCTTGCCGCGCTCCTGGGCGC CGGGGTGCTGGGAATGGGCGCGTTCGGCAAGCTCGAGTCGGCGGGGTTCGACGACCCCGCCTCCGACTCCAGCCGGGCCG CCGACCTCGTCGACACGAAGTTCGGTGGGGAGCCGAACCTCGTCCTGCTCGTCACGGCCCGCGCCGGGGCCCCAGGCACG GACCCCCCGGCCGTCGACACCCCCGCGGTGGCCGACGCCGGCCGTCGCCTCGCCACCGAACTGGCCGCCCAGCCCGGGGT GACCAACGTGTCGTCCTACTGGACCGGGGCCTCGCCGCTGGTCTCCGACGACGGCCGGGCCGCGCTGGTCCTGGCCAGCG TGGACGACGACCACGAGTCCGACCTCGTCGCGAAGTACGAGGACCTGTACAAGGCCGGCCAGCCCGGCGGGCCCGACGCC GACTCCCCGGTCACAGTCCGCCCCGGTGGCGCGGCGACCGTCGGGGAGGACATCAACGGCCAGGTGGGCGCGGACCTGGC CGTGGCCGAGTCCATCGCGATACCGATCACGATGGTGCTGCTGGTGATCGCCTTCGGCGGCCTGCTCGCCGCGTTGCTGC CGCTGGGGATCGGGCTGGTCGGCATCCTGGGCGGCTTCGCGTTCCTGTCGGTCGTCGGCGGCCTGACCGACGTGTCGATC TTCGCCGTGAACCTGACCACGGCGCTCGGCCTCGGCCTCGGTATCGACTACGCGCTGCTCATGGTCAGCCGGTTCCGGGA GGAGCTCGCCGCGGGCCACGACCGGGCCACGGCGGTGTCGACCACGGTGCGCACGGCCGGTCGCACGATTCTGTTCAGCG GTGCGACGGTGATCGTCGCGCTCGCGGTGATGCTGGTCTTCCCGCCGTACTTCCTGAAGTCGATGGCATACGCGGGCATC GCCGTCACCGCGGTCGCCGTGATCACCGCCGTGACGGCGCTGCCCGCCGTGCTCATGCTGCTCGGCCCGCGGGTGAACGC GCTGCGCGTCGGCGGCCTGATCGGACGGCTGCGCCGCTGCCGGGGCGAGTCCTCGGCCGTTGCGGGAGTCCCGACCACCA CGAGCGCCGCGGCGGGTGGGGGAGCGCCCGGGGCGGAGCGGGAGGTGCCGCGGGAGGCCGTCGAGTCGCCGTTCTGGCGG CGGGTGGCAACCACCGTCATGCGCCGCCCGCTGCTGACCGGGCTGCCCGTGATTGCACTGCTCCTCGCGCTCGGCGCGCC GTTCCTGCACGTCAAGTTCGGCACCCCGGACGACCGGGTCCTGCGCGAGCGCGCCTCCAGCCGGGCCGTCGGGGACGTCC TGCGCGACGACTTCTCCTCCAACGACGCCGGGGCGATCGTCGTCGTCCTCACCGGCCCGACCGAGCGGCTCGGTGCGACG GGCATCGCCGACTACGCCACGGAGCTGTCCGGGCTCGACGGCGTGGCCCGGGTCGACAGCTCCGCGGGCATCGTGCTCGA CGGGCGGGTCGTCGTGCCACCGGGCCCGACCACCGAGCGGTACGCGGCCGAGAACGCCGCCTACCTGCGGGTGGTGCCCT CGGTGGAGCCGCACTCCGACGAGGCCCAGGCGTTGGTCGGCGTGATCCGGCACACCGCCACCCCGGCGGGCACCCAGGCG CTGGTCGGCGGTCCGCCGGCGGTGCTCGTCGACGGCAAGGCGACCATCGGCGACCGGCTCCCGCTGGCCATCGGCCTGAT CGCGCTGGCCACGTTCGTCCTGCTGTTCCTGTTCACCGGCAGCGTGCTGCTGCCGCTGAAGGCGATCCTGATGAACGGGC TGACGCTGACCTCCGTCTTCGGCGTGGCTGTCTGGATCTTCCAGGACGGTCATCTCTCCGGGGCGCTCGGCTTCACCCCG GGCCCGCTGGACACGTCCATGCCGGTGCTGCTGTTCTGCATCGCGTTCGGCCTGAGCATGGACTACGAGGTCTTCCTGCT CTCCCGGATCAAGGAGGAGCACGACGCGGGCGCGTCGAACACCGAGGCGGTCGCCACCGGCCTCGCCCGCACCGGTCGCC TCGTGACGACCGCCGCGGCGCTGCTCGCGGTCACCTTCCTGGCCTTCGGGACGTCCTCGGTGCGGTTCATACAGATGTTC GGCCTGGGCACGGCTCTGGCGATCCTGCTGGACGCGTCCCTGATCCGCGGGGTGCTGGTGCCGGCGTTCATGCGGGTGGC CGGGCAGGCCAACTGGTGGGCGCCGAAGCCGCTGCGGGCGCTGCACGCCCGGATCGGCCTCAGCGAAGGCTCCGGCGAGG GCCCCGGCGCGGGGCCCACCGCCGAGGGAGTCAGTAGCGTTCGAAGCCCCGCCGGCGCTCCCAGTCGGTGA
Upstream 100 bases:
>100_bases AGCGGTGAGCGGTGTCAACTTTCGAGAACAGGGGTCTTGACGGCGACCGGTGTTTGAGAACACTGTTCTCTCAAGCGATC GGTTCTCTCGGGAGGGTTCC
Downstream 100 bases:
>100_bases CCGTCCGCTCGTAGCCGGCCAGCTCGACGTCGGCGGCGTGCGCCAGATGGTCGACGACCCGCTCGCCGAACGCGGCCCGG GCCGTGGCGCTCTCCCGCCA
Product: MMPL domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 796; Mature: 796
Protein sequence:
>796_residues MFTAVAKLVTRRPRLVLLVTLAALLGAGVLGMGAFGKLESAGFDDPASDSSRAADLVDTKFGGEPNLVLLVTARAGAPGT DPPAVDTPAVADAGRRLATELAAQPGVTNVSSYWTGASPLVSDDGRAALVLASVDDDHESDLVAKYEDLYKAGQPGGPDA DSPVTVRPGGAATVGEDINGQVGADLAVAESIAIPITMVLLVIAFGGLLAALLPLGIGLVGILGGFAFLSVVGGLTDVSI FAVNLTTALGLGLGIDYALLMVSRFREELAAGHDRATAVSTTVRTAGRTILFSGATVIVALAVMLVFPPYFLKSMAYAGI AVTAVAVITAVTALPAVLMLLGPRVNALRVGGLIGRLRRCRGESSAVAGVPTTTSAAAGGGAPGAEREVPREAVESPFWR RVATTVMRRPLLTGLPVIALLLALGAPFLHVKFGTPDDRVLRERASSRAVGDVLRDDFSSNDAGAIVVVLTGPTERLGAT GIADYATELSGLDGVARVDSSAGIVLDGRVVVPPGPTTERYAAENAAYLRVVPSVEPHSDEAQALVGVIRHTATPAGTQA LVGGPPAVLVDGKATIGDRLPLAIGLIALATFVLLFLFTGSVLLPLKAILMNGLTLTSVFGVAVWIFQDGHLSGALGFTP GPLDTSMPVLLFCIAFGLSMDYEVFLLSRIKEEHDAGASNTEAVATGLARTGRLVTTAAALLAVTFLAFGTSSVRFIQMF GLGTALAILLDASLIRGVLVPAFMRVAGQANWWAPKPLRALHARIGLSEGSGEGPGAGPTAEGVSSVRSPAGAPSR
Sequences:
>Translated_796_residues MFTAVAKLVTRRPRLVLLVTLAALLGAGVLGMGAFGKLESAGFDDPASDSSRAADLVDTKFGGEPNLVLLVTARAGAPGT DPPAVDTPAVADAGRRLATELAAQPGVTNVSSYWTGASPLVSDDGRAALVLASVDDDHESDLVAKYEDLYKAGQPGGPDA DSPVTVRPGGAATVGEDINGQVGADLAVAESIAIPITMVLLVIAFGGLLAALLPLGIGLVGILGGFAFLSVVGGLTDVSI FAVNLTTALGLGLGIDYALLMVSRFREELAAGHDRATAVSTTVRTAGRTILFSGATVIVALAVMLVFPPYFLKSMAYAGI AVTAVAVITAVTALPAVLMLLGPRVNALRVGGLIGRLRRCRGESSAVAGVPTTTSAAAGGGAPGAEREVPREAVESPFWR RVATTVMRRPLLTGLPVIALLLALGAPFLHVKFGTPDDRVLRERASSRAVGDVLRDDFSSNDAGAIVVVLTGPTERLGAT GIADYATELSGLDGVARVDSSAGIVLDGRVVVPPGPTTERYAAENAAYLRVVPSVEPHSDEAQALVGVIRHTATPAGTQA LVGGPPAVLVDGKATIGDRLPLAIGLIALATFVLLFLFTGSVLLPLKAILMNGLTLTSVFGVAVWIFQDGHLSGALGFTP GPLDTSMPVLLFCIAFGLSMDYEVFLLSRIKEEHDAGASNTEAVATGLARTGRLVTTAAALLAVTFLAFGTSSVRFIQMF GLGTALAILLDASLIRGVLVPAFMRVAGQANWWAPKPLRALHARIGLSEGSGEGPGAGPTAEGVSSVRSPAGAPSR >Mature_796_residues MFTAVAKLVTRRPRLVLLVTLAALLGAGVLGMGAFGKLESAGFDDPASDSSRAADLVDTKFGGEPNLVLLVTARAGAPGT DPPAVDTPAVADAGRRLATELAAQPGVTNVSSYWTGASPLVSDDGRAALVLASVDDDHESDLVAKYEDLYKAGQPGGPDA DSPVTVRPGGAATVGEDINGQVGADLAVAESIAIPITMVLLVIAFGGLLAALLPLGIGLVGILGGFAFLSVVGGLTDVSI FAVNLTTALGLGLGIDYALLMVSRFREELAAGHDRATAVSTTVRTAGRTILFSGATVIVALAVMLVFPPYFLKSMAYAGI AVTAVAVITAVTALPAVLMLLGPRVNALRVGGLIGRLRRCRGESSAVAGVPTTTSAAAGGGAPGAEREVPREAVESPFWR RVATTVMRRPLLTGLPVIALLLALGAPFLHVKFGTPDDRVLRERASSRAVGDVLRDDFSSNDAGAIVVVLTGPTERLGAT GIADYATELSGLDGVARVDSSAGIVLDGRVVVPPGPTTERYAAENAAYLRVVPSVEPHSDEAQALVGVIRHTATPAGTQA LVGGPPAVLVDGKATIGDRLPLAIGLIALATFVLLFLFTGSVLLPLKAILMNGLTLTSVFGVAVWIFQDGHLSGALGFTP GPLDTSMPVLLFCIAFGLSMDYEVFLLSRIKEEHDAGASNTEAVATGLARTGRLVTTAAALLAVTFLAFGTSSVRFIQMF GLGTALAILLDASLIRGVLVPAFMRVAGQANWWAPKPLRALHARIGLSEGSGEGPGAGPTAEGVSSVRSPAGAPSR
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 81211; Mature: 81211
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTAVAKLVTRRPRLVLLVTLAALLGAGVLGMGAFGKLESAGFDDPASDSSRAADLVDTK CHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC FGGEPNLVLLVTARAGAPGTDPPAVDTPAVADAGRRLATELAAQPGVTNVSSYWTGASPL CCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC VSDDGRAALVLASVDDDHESDLVAKYEDLYKAGQPGGPDADSPVTVRPGGAATVGEDING CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC QVGADLAVAESIAIPITMVLLVIAFGGLLAALLPLGIGLVGILGGFAFLSVVGGLTDVSI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHE FAVNLTTALGLGLGIDYALLMVSRFREELAAGHDRATAVSTTVRTAGRTILFSGATVIVA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCHHHHHH LAVMLVFPPYFLKSMAYAGIAVTAVAVITAVTALPAVLMLLGPRVNALRVGGLIGRLRRC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RGESSAVAGVPTTTSAAAGGGAPGAEREVPREAVESPFWRRVATTVMRRPLLTGLPVIAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH LLALGAPFLHVKFGTPDDRVLRERASSRAVGDVLRDDFSSNDAGAIVVVLTGPTERLGAT HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCC GIADYATELSGLDGVARVDSSAGIVLDGRVVVPPGPTTERYAAENAAYLRVVPSVEPHSD HHHHHHHHHCCCCCHHHCCCCCCEEECCEEEECCCCCCHHHHHCCCEEEEEECCCCCCCH EAQALVGVIRHTATPAGTQALVGGPPAVLVDGKATIGDRLPLAIGLIALATFVLLFLFTG HHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC SVLLPLKAILMNGLTLTSVFGVAVWIFQDGHLSGALGFTPGPLDTSMPVLLFCIAFGLSM CHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC DYEVFLLSRIKEEHDAGASNTEAVATGLARTGRLVTTAAALLAVTFLAFGTSSVRFIQMF CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH GLGTALAILLDASLIRGVLVPAFMRVAGQANWWAPKPLRALHARIGLSEGSGEGPGAGPT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC AEGVSSVRSPAGAPSR HHHHHHHHCCCCCCCC >Mature Secondary Structure MFTAVAKLVTRRPRLVLLVTLAALLGAGVLGMGAFGKLESAGFDDPASDSSRAADLVDTK CHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC FGGEPNLVLLVTARAGAPGTDPPAVDTPAVADAGRRLATELAAQPGVTNVSSYWTGASPL CCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC VSDDGRAALVLASVDDDHESDLVAKYEDLYKAGQPGGPDADSPVTVRPGGAATVGEDING CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC QVGADLAVAESIAIPITMVLLVIAFGGLLAALLPLGIGLVGILGGFAFLSVVGGLTDVSI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHE FAVNLTTALGLGLGIDYALLMVSRFREELAAGHDRATAVSTTVRTAGRTILFSGATVIVA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCHHHHHH LAVMLVFPPYFLKSMAYAGIAVTAVAVITAVTALPAVLMLLGPRVNALRVGGLIGRLRRC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RGESSAVAGVPTTTSAAAGGGAPGAEREVPREAVESPFWRRVATTVMRRPLLTGLPVIAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH LLALGAPFLHVKFGTPDDRVLRERASSRAVGDVLRDDFSSNDAGAIVVVLTGPTERLGAT HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCC GIADYATELSGLDGVARVDSSAGIVLDGRVVVPPGPTTERYAAENAAYLRVVPSVEPHSD HHHHHHHHHCCCCCHHHCCCCCCEEECCEEEECCCCCCHHHHHCCCEEEEEECCCCCCCH EAQALVGVIRHTATPAGTQALVGGPPAVLVDGKATIGDRLPLAIGLIALATFVLLFLFTG HHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC SVLLPLKAILMNGLTLTSVFGVAVWIFQDGHLSGALGFTPGPLDTSMPVLLFCIAFGLSM CHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC DYEVFLLSRIKEEHDAGASNTEAVATGLARTGRLVTTAAALLAVTFLAFGTSSVRFIQMF CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH GLGTALAILLDASLIRGVLVPAFMRVAGQANWWAPKPLRALHARIGLSEGSGEGPGAGPT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC AEGVSSVRSPAGAPSR HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]