| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312511
Identifier: 158312511
GI number: 158312511
Start: 764443
End: 765618
Strand: Direct
Name: 158312511
Synonym: Franean1_0654
Alternate gene names: NA
Gene position: 764443-765618 (Clockwise)
Preceding gene: 158312506
Following gene: 158312513
Centisome position: 8.51
GC content: 65.31
Gene sequence:
>1176_bases GTGCTGTATGGGAACCACCATGTGTTCCGCCGCTCACGTCTGCGCGGGCGTGACCGGCCTGGGGGGTTGGTCGTAACCAA GAAAGGCCTCGAGAGAGGGGCGTCCGTGCGAACGCTCGAACCCACCACCCTCGACCTCGACGCGATCGAGGTGGACAAGC TCAACAAAGGCGTCACGCTCAGTCTGCTGATACCCGCTCGCGGGCCTGAGGCGGCGCGGACGCTGGGAACCATCGTCGCG CTCAACCGGCAACGCTGGATGCAGGAACGCAGTGTCCTCGACGAGATCGGGGTCATAGTGGACCCCTCCTCGGACGGAGA CGAGCACGATCTCGTCCGGATCGCGACCGAGGCGGGCGCGAGCTGGGTCGTGCGCGGCCAGTCCGTCCTGGAGCTCCACG CGGGGCGGGAGGCGGCCACGACCGGAGGCAAGGCGGGTGCGATGCGCAGTCTCGCCTACCTTGCGTTCGGAAATCGCCTC ATATTCCATGACGCGGACCTCGAAAGCTACGACCCCGCCACCGTAGGTGTTCTCGCCGCCGCCGCGACGGCTGGCAACGC CCCGCTTTTCGTGAACGGAAGCTCGCGCAGGGTCACCGGGGACGGTCAGCCCGGTGGACGTACGACCGAGATGCTGCGCT CGCTGCTCTCGAAACAACTCGCGCGCTATGTGCCGTCCATCACGCGGGCAATCCAGCCGTTGATCGGGGAGTTCGTCATC GACGCCGACGTCTTTGCGGCGCTCGCGTTCTCCCGCGGCTACGGGGTGGAGACCTCGCTGAAGGTTCTGGCTCTCGACCT TCTCGACTACTCGGACTGTCTCCAGGTTGAGCTGCCGATCAAGTATCAGGTTGGTCAGCACTACCACAACCTGGTCAAGC AGTTCCATGAGATCAGTTTCACAATCGACGTTCTCGAGGCGTACTTCCAACGCCGCCGGGTCGATCCGCACGTCGCCATC TGGCAGATTGCCGACAACTACGACCTCCTATTCCCGGGGCGTACGTACGCCCTGCACCGACCGCCGGGTTACGACGACAT CGACTTCGTCCCGCGGCTGGGCTTCTACCAGCCGCTCGCGACGTCGTCGGCCTACCAGGCCCGGCTACCCGAGATCAAGA GTGCTCGCCGTGTCGCACTGGACACGCTGAGTAGGCGGATGCGGGCCTCCGCCTGA
Upstream 100 bases:
>100_bases CCGCGGTGGGCGGCCGAGGAAAGTCGTAACGACCCAGGGCCCGGAAGGACGCCCTGTTGACCCGGGGACGTCTGCCCGGA AAGCTTCGCCCAGGTGGTTC
Downstream 100 bases:
>100_bases CCCCTCCAGCCTGACCCCTCCAGCCTGAGCCCGCCCGCGTGAACCCGTGGGCCTGAGCGGGCTGGCCTGAGTACGCCGGC CTCGGTGCCGGCCTGGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MLYGNHHVFRRSRLRGRDRPGGLVVTKKGLERGASVRTLEPTTLDLDAIEVDKLNKGVTLSLLIPARGPEAARTLGTIVA LNRQRWMQERSVLDEIGVIVDPSSDGDEHDLVRIATEAGASWVVRGQSVLELHAGREAATTGGKAGAMRSLAYLAFGNRL IFHDADLESYDPATVGVLAAAATAGNAPLFVNGSSRRVTGDGQPGGRTTEMLRSLLSKQLARYVPSITRAIQPLIGEFVI DADVFAALAFSRGYGVETSLKVLALDLLDYSDCLQVELPIKYQVGQHYHNLVKQFHEISFTIDVLEAYFQRRRVDPHVAI WQIADNYDLLFPGRTYALHRPPGYDDIDFVPRLGFYQPLATSSAYQARLPEIKSARRVALDTLSRRMRASA
Sequences:
>Translated_391_residues MLYGNHHVFRRSRLRGRDRPGGLVVTKKGLERGASVRTLEPTTLDLDAIEVDKLNKGVTLSLLIPARGPEAARTLGTIVA LNRQRWMQERSVLDEIGVIVDPSSDGDEHDLVRIATEAGASWVVRGQSVLELHAGREAATTGGKAGAMRSLAYLAFGNRL IFHDADLESYDPATVGVLAAAATAGNAPLFVNGSSRRVTGDGQPGGRTTEMLRSLLSKQLARYVPSITRAIQPLIGEFVI DADVFAALAFSRGYGVETSLKVLALDLLDYSDCLQVELPIKYQVGQHYHNLVKQFHEISFTIDVLEAYFQRRRVDPHVAI WQIADNYDLLFPGRTYALHRPPGYDDIDFVPRLGFYQPLATSSAYQARLPEIKSARRVALDTLSRRMRASA >Mature_391_residues MLYGNHHVFRRSRLRGRDRPGGLVVTKKGLERGASVRTLEPTTLDLDAIEVDKLNKGVTLSLLIPARGPEAARTLGTIVA LNRQRWMQERSVLDEIGVIVDPSSDGDEHDLVRIATEAGASWVVRGQSVLELHAGREAATTGGKAGAMRSLAYLAFGNRL IFHDADLESYDPATVGVLAAAATAGNAPLFVNGSSRRVTGDGQPGGRTTEMLRSLLSKQLARYVPSITRAIQPLIGEFVI DADVFAALAFSRGYGVETSLKVLALDLLDYSDCLQVELPIKYQVGQHYHNLVKQFHEISFTIDVLEAYFQRRRVDPHVAI WQIADNYDLLFPGRTYALHRPPGYDDIDFVPRLGFYQPLATSSAYQARLPEIKSARRVALDTLSRRMRASA
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43077; Mature: 43077
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS00539 PYROKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYGNHHVFRRSRLRGRDRPGGLVVTKKGLERGASVRTLEPTTLDLDAIEVDKLNKGVTL CCCCCHHHHHHHHHCCCCCCCCEEEECCHHHCCCCEEEECCCEEECCCEEHHCCCCCEEE SLLIPARGPEAARTLGTIVALNRQRWMQERSVLDEIGVIVDPSSDGDEHDLVRIATEAGA EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEECCCC SWVVRGQSVLELHAGREAATTGGKAGAMRSLAYLAFGNRLIFHDADLESYDPATVGVLAA EEEEECCHHEEECCCCCHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHH AATAGNAPLFVNGSSRRVTGDGQPGGRTTEMLRSLLSKQLARYVPSITRAIQPLIGEFVI HHCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DADVFAALAFSRGYGVETSLKVLALDLLDYSDCLQVELPIKYQVGQHYHNLVKQFHEISF HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECEEEHHHHHHHHHHHHHHHHHH TIDVLEAYFQRRRVDPHVAIWQIADNYDLLFPGRTYALHRPPGYDDIDFVPRLGFYQPLA HHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC TSSAYQARLPEIKSARRVALDTLSRRMRASA CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLYGNHHVFRRSRLRGRDRPGGLVVTKKGLERGASVRTLEPTTLDLDAIEVDKLNKGVTL CCCCCHHHHHHHHHCCCCCCCCEEEECCHHHCCCCEEEECCCEEECCCEEHHCCCCCEEE SLLIPARGPEAARTLGTIVALNRQRWMQERSVLDEIGVIVDPSSDGDEHDLVRIATEAGA EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEECCCC SWVVRGQSVLELHAGREAATTGGKAGAMRSLAYLAFGNRLIFHDADLESYDPATVGVLAA EEEEECCHHEEECCCCCHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHH AATAGNAPLFVNGSSRRVTGDGQPGGRTTEMLRSLLSKQLARYVPSITRAIQPLIGEFVI HHCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DADVFAALAFSRGYGVETSLKVLALDLLDYSDCLQVELPIKYQVGQHYHNLVKQFHEISF HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECEEEHHHHHHHHHHHHHHHHHH TIDVLEAYFQRRRVDPHVAIWQIADNYDLLFPGRTYALHRPPGYDDIDFVPRLGFYQPLA HHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC TSSAYQARLPEIKSARRVALDTLSRRMRASA CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA