| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312344
Identifier: 158312344
GI number: 158312344
Start: 569012
End: 569251
Strand: Direct
Name: 158312344
Synonym: Franean1_0484
Alternate gene names: NA
Gene position: 569012-569251 (Clockwise)
Preceding gene: 158312343
Following gene: 158312347
Centisome position: 6.33
GC content: 61.25
Gene sequence:
>240_bases TTGTCTGCCGGACGGGGTCTGCGTCGGGCAGGCTGGATGGTCATGGTGTGGTCGCTGCTCTACGCCCTGACACGCAACGC TCTCGGGCTGATGTTGCTCCGGGTTCGTGGGGACACCGCGAAGGAGGTAAAGCTCTTCGCCCTGCGACATCAGATGGCGG TGTTGCGATGGCTGTGGGGTGCCAGAACTTGGCCACTGGCCTTGACCTGGTCTTTTAGGTGGCTCGTTCGTATTCGTTGA
Upstream 100 bases:
>100_bases CCCGTTGGAGGCGTTCATCGAATCCAACCGCGCCGCCTACACCCCGGCGGGCTAACCGTGTGGGGCTCCAGAACCCCGAT TTGGGCAGTGACCTGCATGT
Downstream 100 bases:
>100_bases TCAGGCCGTCGAGGACGGGGCGGCGCTTGATCCGTTCCTTGGTCAGGTCGGCGATGGGGTGGTCGGGTCGTGGTGGTTGA AGGTCGCGGCTGCGGTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSAGRGLRRAGWMVMVWSLLYALTRNALGLMLLRVRGDTAKEVKLFALRHQMAVLRWLWGARTWPLALTWSFRWLVRIR
Sequences:
>Translated_79_residues MSAGRGLRRAGWMVMVWSLLYALTRNALGLMLLRVRGDTAKEVKLFALRHQMAVLRWLWGARTWPLALTWSFRWLVRIR >Mature_78_residues SAGRGLRRAGWMVMVWSLLYALTRNALGLMLLRVRGDTAKEVKLFALRHQMAVLRWLWGARTWPLALTWSFRWLVRIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9339; Mature: 9208
Theoretical pI: Translated: 12.80; Mature: 12.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGRGLRRAGWMVMVWSLLYALTRNALGLMLLRVRGDTAKEVKLFALRHQMAVLRWLWG CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHC ARTWPLALTWSFRWLVRIR CCCCCEEEEEEEEEEEEEC >Mature Secondary Structure SAGRGLRRAGWMVMVWSLLYALTRNALGLMLLRVRGDTAKEVKLFALRHQMAVLRWLWG CCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHC ARTWPLALTWSFRWLVRIR CCCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA