| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312342
Identifier: 158312342
GI number: 158312342
Start: 567588
End: 568082
Strand: Direct
Name: 158312342
Synonym: Franean1_0482
Alternate gene names: NA
Gene position: 567588-568082 (Clockwise)
Preceding gene: 158312341
Following gene: 158312343
Centisome position: 6.32
GC content: 69.7
Gene sequence:
>495_bases ATGGACAAGGCCGAACTCGACGAACAGAACCGTCGGGTGACAGCGGAATTCCTCACCCGGGGCGGCGTGGTCAGCGGCGA CTACCAGGGCATGCCGCTGCTCCTGCTGCACCACGTCGGCGCCAGGACCGGACATGCTCGGGTCAACCCGATGACCTACC TGGCGGTCAACCACAGCTTCGCGGTTTTCGCGTCCAACGGCGGCGCGGCCGTGCACCCCGACTGGTACCACAACCTCCTG GCCCACCCCACGGTCTCGGTCGTCGTCGGGACGGAGACGTTCCCCATGGTGGCCCGGGTCGCGACCGGAGCGGAACGGGA GAGTATCTGGGCCCGGCAGAAGGCCGTCAACCCGCTGTTTGCAGAGCTCGAACGGGCCACCACCCGCCAGATCCCGGTCG TCATCCTCGACCGCACCCCGGCTCCGCTGCCGGCACCGGAGCCGGAGCCTACGCCGGTGCCGGCCTCGAGCAAGGACGGG GACGACCGGCGGTGA
Upstream 100 bases:
>100_bases ACATCGTCGTCGACGGCGGGATGATGGCCAGCGTCTAAAACCCGTGACAGCATCGTTCCCGTCGACCCCACCCGCCTGAC CGAAGGAACTCAGACCAGTC
Downstream 100 bases:
>100_bases CCGTCCTCGTTGTCGGCGCTACCGGCCGAACCGCGTCGTACCTCGTCATGTGCCTGCTGCGGGACGGCGTGCCGGTGCGG GCGCTGGTGCGGGACCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MDKAELDEQNRRVTAEFLTRGGVVSGDYQGMPLLLLHHVGARTGHARVNPMTYLAVNHSFAVFASNGGAAVHPDWYHNLL AHPTVSVVVGTETFPMVARVATGAERESIWARQKAVNPLFAELERATTRQIPVVILDRTPAPLPAPEPEPTPVPASSKDG DDRR
Sequences:
>Translated_164_residues MDKAELDEQNRRVTAEFLTRGGVVSGDYQGMPLLLLHHVGARTGHARVNPMTYLAVNHSFAVFASNGGAAVHPDWYHNLL AHPTVSVVVGTETFPMVARVATGAERESIWARQKAVNPLFAELERATTRQIPVVILDRTPAPLPAPEPEPTPVPASSKDG DDRR >Mature_164_residues MDKAELDEQNRRVTAEFLTRGGVVSGDYQGMPLLLLHHVGARTGHARVNPMTYLAVNHSFAVFASNGGAAVHPDWYHNLL AHPTVSVVVGTETFPMVARVATGAERESIWARQKAVNPLFAELERATTRQIPVVILDRTPAPLPAPEPEPTPVPASSKDG DDRR
Specific function: May be involved in the activation of oxazole analogs [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deazaflavin-dependent nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004378 [H]
Pfam domain/function: PF04075 DUF385 [H]
EC number: NA
Molecular weight: Translated: 17848; Mature: 17848
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKAELDEQNRRVTAEFLTRGGVVSGDYQGMPLLLLHHVGARTGHARVNPMTYLAVNHSF CCCCCCCCCCCEEHHHHHHCCCEECCCCCCCHHHEEECCCCCCCCEECCCEEEEEECCEE AVFASNGGAAVHPDWYHNLLAHPTVSVVVGTETFPMVARVATGAERESIWARQKAVNPLF EEEECCCCCEECCHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCHHH AELERATTRQIPVVILDRTPAPLPAPEPEPTPVPASSKDGDDRR HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDKAELDEQNRRVTAEFLTRGGVVSGDYQGMPLLLLHHVGARTGHARVNPMTYLAVNHSF CCCCCCCCCCCEEHHHHHHCCCEECCCCCCCHHHEEECCCCCCCCEECCCEEEEEECCEE AVFASNGGAAVHPDWYHNLLAHPTVSVVVGTETFPMVARVATGAERESIWARQKAVNPLF EEEECCCCCEECCHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCHHH AELERATTRQIPVVILDRTPAPLPAPEPEPTPVPASSKDGDDRR HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]